hemberg-lab / sc3s Goto Github PK

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ImportError                               Traceback (most recent call last)
<ipython-input-1-5422b1ae3fb8> in <module>
      1 import numpy as np
      2 import pandas as pd
----> 3 import scanpy as sc
      4 sc.settings.verbosity = 3
      5 sc.settings.set_figure_params(dpi=100, color_map='OrRd')
~\anaconda3\lib\site-packages\scanpy\__init__.py in <module>
     12     # (start with settings as several tools are using it)
     13     from ._settings import settings, Verbosity
---> 14     from . import tools as tl
     15     from . import preprocessing as pp
     16     from . import plotting as pl
~\anaconda3\lib\site-packages\scanpy\tools\__init__.py in <module>
     15 from ._leiden import leiden
     16 from ._louvain import louvain
---> 17 from ._sim import sim
     18 from ._score_genes import score_genes, score_genes_cell_cycle
     19 from ._dendrogram import dendrogram
~\anaconda3\lib\site-packages\scanpy\tools\_sim.py in <module>
     21 from anndata import AnnData
     22 
---> 23 from .. import _utils, readwrite, logging as logg
     24 from .._settings import settings
     25 from .._compat import Literal
~\anaconda3\lib\site-packages\scanpy\readwrite.py in <module>
      8 import pandas as pd
      9 from matplotlib.image import imread
---> 10 import tables
     11 import anndata
     12 from anndata import (
~\anaconda3\lib\site-packages\tables\__init__.py in <module>
     60 # Import the user classes from the proper modules
     61 from .exceptions import *
---> 62 from .file import File, open_file, copy_file
     63 from .node import Node
     64 from .group import Group
~\anaconda3\lib\site-packages\tables\file.py in <module>
     31 import numpy
     32 
---> 33 from . import hdf5extension
     34 from . import utilsextension
     35 from . import parameters
ImportError: DLL load failed while importing hdf5extension: The specified procedure could not be found.