Minimal example for problem with fastq reader.
Execute with cargo run
.
The simulated reads in the folder 10 are present as .fastq.gz
and as .fastq
files (extracted with gunzip -k
).
Run the code once to see 100 read beeing read, then comment lines 42-43 back in and only 8 readcs are read.
With zless
the reads are there and since the unzipped files were generated from the zipped files, this should not be a problem of the input.