Giter VIP home page Giter VIP logo

plip_parser's Introduction

PLIP Parser

A python code to Parse the txt files produced from PLIP webserver

This code was tried with files containing:

1- Hydrophobic Interactions

2- H-bonds

3- Salt bridges

4- Pi-stacking

and was found to work well with them.

Other interactions produced from PLIP were not tried.

If you have other interactions in your result file and the program could not detect them, raise a new issue and provide the txt file producedfrom PLIP containing the interactions, please.

Steps:

from source code:

1- Download the PLIP_parse.py file.

2- Install python 3.7 (if you dont have it), or you can use colab and upload your txt files.

3- install python-docs (pip install python-docx).

a- from the cmd on your windows.

b- from conda command line (if you have anaconda installed).

c- on colab, use this command (!pip install python-docx). (there is an ! mark at the beginning)

4- run the file (python dest_to_py_file).

5- follow the instructions.

6- Thank you.

from exe file:

1- download the exe file and run it. (NO NEED TO INSTALL PYTHON)

A YouTube video describing how to use it: https://youtu.be/RwJkB9O3AFs?list=PLN_sQXLvUWhXjGz2c807ijngl-Hh4kp_g

plip_parser's People

Contributors

hima111997 avatar

Watchers

 avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.