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Comments (4)

mark0237 avatar mark0237 commented on August 15, 2024

It is a pity I cannot get to use this package with my data as well. I found it perfect for what I would like to analyze since I am not really an expert on scRNA seq data.

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mark0237 avatar mark0237 commented on August 15, 2024

Hi there!

I CANT BELIEVE I COULD FINALLY SOLVE THIS PROBLEM!

I HAVE (RE)-INSTALLED THE FOLLOWING VERSIONS

gfortran 10.2 for Catalina (macOS 10.15)
https://github.com/fxcoudert/gfortran-for-macOS/releases/tag/10.2

RCCARMADILLO OLDER VERSION
install.packages("https://cran.r-project.org/src/contrib/Archive/RcppArmadillo/RcppArmadillo_0.9.900.3.0.tar.gz", repos=NULL, type="source")

SCDE VERSION 1.99.1 AND FLEXMIX 2.3-13 OLD
require(devtools)
devtools::install_version('flexmix', '2.3-13')
devtools::install_github('hms-dbmi/scde', build_vignettes = FALSE)

I HOPE THIS WILL BE OF A HELP FOR SOMEONE WHO HAVE BEEN STRUGGLING FOR HOURS AS ME

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oyshilin avatar oyshilin commented on August 15, 2024

I'm facing this problem as well, is this method useful for windows user?

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