hoyinchu / mid_lpwgs_breast_cancer Goto Github PK

by Mohammed Al-Jumaan*, Hoyin Chu*, Abdullah Al-Sulaiman, Sabrina Y. Camp, Seunghun Han, Riaz Gillani, Yousef Al Marzooq, Fatmah Almulhim, Chittibabu Vatte, Areej Al Nemer, Afnan Almuhanna, Eliezer M Van Allen, Amein Al-Ali*, Saud H AlDubayan*

medRxiv 2022.12.07.22282785; doi: https://doi.org/10.1101/2022.12.07.22282785

The main notebook used for data analysis and generation of most main figures. All data required for running the notebook is available in this repository

The data analysis and visualization notebook for Figure 2 (the lpWGS performance evaluation figure). Due to the sensitve nature of the data and file size limit this requires an additional file to run which is available upon reasonable requests.