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openclinica

OpenClinica is the world's first commercial open source clinical trial software for Electronic Data Capture (EDC) Clinical Data Management (CDM).

openproject

OpenProject is the leading open source project management software.

openprotein

A PyTorch framework for prediction of tertiary protein structure

openvectoreditor

Teselagen's Open Source Vector/Plasmid Editor Component

paccmann_generator

Generative models for transcriptomic-driven or protein-driven molecular design (PaccMann^RL).

papers_for_protein_design_using_dl

List of papers about Proteins Design using Deep Learning

peptidebuilder

peptides

An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.

pg_similarity

set of functions and operators for executing similarity queries

protein-structure-prediction-using-machine-learning-algorithms

Built a Machine Learning model which predicts the three-dimensional structure of the protein from their amino acid sequences. Determining the three-dimensional structure of protein molecules is a primary focus for many aspects of modern biological research.

protein_feature_extraction

Python code to extract features from Protein sequences for Machine Learning/Deep Learning

proteinnet

Standardized data set for machine learning of protein structure

pvactools

pymod

PyMod 2 - Sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL.

pymol

pymol scripts

pymol-script-repo

Collected scripts for Pymol

python-machine-learning-algorithm

Python-Machine-Learning-Algorithm

pytorch-handbook

pytorch handbook是一本开源的书籍，目标是帮助那些希望和使用PyTorch进行深度学习开发和研究的朋友快速入门，其中包含的Pytorch教程全部通过测试保证可以成功运行

rfdesign

Protein hallucination and inpainting with RoseTTAFold

rq-vae-transformer

The official implementation of Autoregressive Image Generation using Residual Quantization (CVPR '22)

sbioa

An introduction to Structural Bioinformatics Algorithms and scientific computing using Python/PyMOL

scinote-web

Open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place.

shark

The Shark Machine Leaning Library. See more:

taiga-back

Project management web application with scrum in mind! Built on top of Django and AngularJS (Backend Code)

transformer-vae

A library for making Transformer Variational Autoencoders. (Extends the Huggingface/transformers library.)

treeviz

Tree diagrams with JavaScript :evergreen_tree: :chart_with_upwards_trend:

tushare

TuShare is a utility for crawling historical data of China stocks

unirep

UniRep model, usage, and examples.

vodal

A vue modal with animations.

x-spreadsheet

A web-based JavaScript（canvas） spreadsheet