Comments (2)
Hy4m
commented on June 6, 2024
linkET（在使用之前，请确保版本是0.0.7.3，要是之前的版本可能会报错）提供了一个相对简单的聚类函数reorder_by()，最简单的使用方法如下：
library(linkET)
set_corrplot_style()
correlate(mtcars) |>
reorder_by() |> #同时对行列进行聚类
qcorrplot() +
geom_square()
rand_correlate(30, 10) |>
reorder_by(by_rows = "hclust",
by_cols = "none") |> #仅仅对行聚类
qcorrplot() +
geom_square()from linket.
shishishiny
commented on June 6, 2024
非常感谢，很有帮助
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主题: Re: [Hy4m/linkET] 是否可以实现热图聚类 (Issue #15)
linkET（在使用之前，请确保版本是0.0.7.3，要是之前的版本可能会报错）提供了一个相对简单的聚类函数reorder_by()，最简单的使用方法如下：
library(linkET) set_corrplot_style() correlate(mtcars) |> reorder_by() |> #同时对行列进行聚类 qcorrplot() + geom_square() rand_correlate(30, 10) |> reorder_by(by_rows = "hclust", by_cols = "none") |> #仅仅对行聚类 qcorrplot() + geom_square()
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Related Issues (20)
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