Comments (6)
yannikschaelte
commented on July 27, 2024
1
@elbaraim it appears that this is a problem of auto-calculated burn-in, in case the entire array is found to be burn-in. I guess in this case an appropriate error should be thrown, and the test adjusted.
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yannikschaelte
commented on July 27, 2024
confirmed, ~4% fail rate
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yannikschaelte
commented on July 27, 2024
Also at https://github.com/ICB-DCM/pyPESTO/runs/7650416076?check_suite_focus=true
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elbaraim
commented on July 27, 2024
..., and the test adjusted.
@yannikschaelte For the second part, what would you have in mind? Just for the sake of testing the visualization function to, e.g. fix the burn-in index to a given value?
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yannikschaelte
commented on July 27, 2024
ok it can ofc happen that geweke says end of chain. if this test is just about running some tests that do not rely on the geweke being some actually reasonable number, then I agree you can just fix it here to some intermediate index.
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dweindl
commented on July 27, 2024
Still happening... https://github.com/ICB-DCM/pyPESTO/actions/runs/3280972663/jobs/5402409945
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Related Issues (20)
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