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Stephane-D avatar Stephane-D commented on September 6, 2024

Hi Giovanni,

Indeed this is because we are using an older version of Bio-Formats (the library which open the LIF image) which has a bug in the ordering. The problem is that the current last version of Bio-Formats bring troubles with Micro-Manager in Icy so we need to find a workaround so we could use the last version of Bio-Format withtout troubles.
If you don't need Micro-Manager then you can simply download the last version of Bio-Formats from here :
https://downloads.openmicroscopy.org/bio-formats/5.9.0/artifacts/bioformats_package.jar
Then replace the lib/bioformats.jar file in the Icy folder by the one you just downloaded (change the name to match name in icy).

from icy-kernel.

giocard avatar giocard commented on September 6, 2024

Hi Stephane,

thank you for the explanation. I followed your suggestion and now everything works fine.
Thanks again!
Giovanni

from icy-kernel.

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