imperial-igem / django-dnabot Goto Github PK
View Code? Open in Web Editor NEWa Django rest framework version of DNA-BOT
a Django rest framework version of DNA-BOT
include unit test for dnabot to ensure new pull requests dont affect functionallity
When file is made they are all called the same name
output_1.py
We need to add a id to every output file made
Add viewset
For now only need simple viewset until we know we can accept file as see them, however later on this is where the processing will happen for dnabot as we will need to write our own viewset, this issue is for the basic version
https://www.django-rest-framework.org/tutorial/quickstart/`
example of basic viewset here
Discuss how we should delete the output files made if we dont delete the backend will grow 4 more files everytime someone submits a request, which is unfeasable
research weather to use travis, jenkis or github actions and implement here
Need to think about what we want our model.py to look like??
https://www.django-rest-framework.org/tutorial/1-serialization/
create the generic URL from viewset to view basics
Create a requirements.txt in the root directory so easy for others to get started working on this project as well as for use to track and ensure all using the same version of dependencies ๐
** At times doesnt work after second request **
i believe this because each time output files are made they make a folder inside eachother, before we sort this we need to find a way to delete the files after they have been downloaded
Consider which field we need for our Serializer
For example which class might we want and inside each on which field we need. to be able to recieve DNA-BOT inputs
def dnabot(ethanol_well_for_stage_2,deep_well_plate_stage_4, input_construct_path,output_sources_paths):
Possibly as well need a id, aswell as possible blank field which hold 4 output python files?
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