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This remote module contains classes related to segmentation of biological cells. It has classes to represent cells' shape, color, and growth state. It also has classes to represent a cell genome, whose expression is modeled by differential equations.

License: Apache License 2.0

CMake 2.47% C++ 95.31% Python 2.22%
itk-module biological-data-analysis cell-analysis

itkbiocell's Introduction

ITKBioCell

image

An ITK remote module for segmentation of biological cells.

This module contains classes related to segmentation of biological cells. It has classes to represent cells' shape, color, and growth state. It also has classes to represent a cell genome, whose expression is modeled by differential equations.

itkbiocell's People

Contributors

dzenanz avatar hjmjohnson avatar jhlegarreta avatar mseng10 avatar tbirdso avatar thewtex avatar

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itkbiocell's Issues

Warnings with ITKv5.1 + clang11

In file included from /user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/src/itkBioGene.cxx:19:
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:35: warning: anonymous non-C-compatible type given name for linkage purposes by alias declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
using ControlDomainType = struct
^
ControlDomainType
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:29: note: type is not C-compatible due to this member declaration
using ControlDomainType = struct
^~~~~~
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:9: note: type is given name 'ControlDomainType' for linkage purposes by this alias declaration
using ControlDomainType = struct
^
1 warning generated.
[289/3196] Building CXX object Modules/Remote/BioCell/test/CMakeFiles/BioCellTestDriver.dir/itkBioGeneTest.cxx.o
In file included from /user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/test/itkBioGeneTest.cxx:21:
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:35: warning: anonymous non-C-compatible type given name for linkage purposes by alias declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
using ControlDomainType = struct
^
ControlDomainType
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:29: note: type is not C-compatible due to this member declaration
using ControlDomainType = struct
^~~~~~
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:9: note: type is given name 'ControlDomainType' for linkage purposes by this alias declaration
using ControlDomainType = struct
^
1 warning generated.
[314/3196] Building CXX object Modules/Remote/BioCell/CMakeFiles/BioCellHeaderTest1.dir/test/BioCellHeaderTest1.cxx.o
In file included from Modules/Remote/BioCell/test/BioCellHeaderTest1.cxx:28:
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:35: warning: anonymous non-C-compatible type given name for linkage purposes by alias declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
using ControlDomainType = struct
^
ControlDomainType
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:29: note: type is not C-compatible due to this member declaration
using ControlDomainType = struct
^~~~~~
/user/iibi/johnsonhj/src/ITK/Modules/Remote/BioCell/include/itkBioGene.h:52:9: note: type is given name 'ControlDomainType' for linkage purposes by this alias declaration
using ControlDomainType = struct
^

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