• 🔭 I’m currently working on: implementing ML models in analysis & pipeline automation & spatial transcriptomics neighbourhood analysis (interactVis)!
• 🌱 I’m currently learning: NextFlow!
• 💬 Ask me about: Anything! I'll try and help as best as I can!
• 📫 How to reach me: LinkedIn
• ⚡ Fun fact: I went to high school in China! And my profile picture is AI generated (surprise!).

• https://doi.org/10.7554/eLife.77335
• https://doi.org/10.1038/s41467-021-26297-6

I am a passionate Bioinformatician at the Genome Centre (Queen Mary University of London), a core facility providing NGS services and analysis to internal and external clients. I learnt to code (R) and the basics of bioinformatics during my PhD, which was focussed on the epigenetic and transcriptomic profiles of Glioblastoma brain tumours. Being predominantly self-taught; I love the continual learning process of coding and bioinformatics which makes everyday exciting!

I have experience with many dataset types including:

• Bulk-RNAseq
• Single-cell-RNAseq
• Spatial transcriptomics
• ChIPseq
• RRBS
• Methylation arrays
• WGS
• Flow cytometry

My services range from support to full analysis pipelines for clients, which may include where appropriate:

• Quality control
• Filtering
• Normalisation
• Dimensionality reduction
• Clustering
• Exploratory analysis
• Batch correction
• Differential analysis
• Pathway analysis and more.