jarninggau / scdva Goto Github PK

An R shiny based tool used for single cell RNA-seq data visualization and analysis.

For more details and basic usage see following tutorials:
User manual for scDVA

A running demo of scDVA is on scDVA

Please contact us:
Ziyi Li: [email protected]
Zemin Zhang: [email protected]

After you run the app.R, the page will look like this:

You can explore the gene expression and metadata information with tSNE(UMAP) plot, box plot, violin plot, bar plot or heatmap. You can also do in-silico FACS and calculate the differentially expressed genes in different groups.

©2019 Ziyi Li. Zhang Lab. All rights reserved.