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View Code? Open in Web Editor NEWPython interface to CUTEst
Home Page: https://jfowkes.github.io/pycutest/
License: GNU General Public License v3.0
Python interface to CUTEst
Home Page: https://jfowkes.github.io/pycutest/
License: GNU General Public License v3.0
Something changed when the macos-latest
(macos-12
) GitHub Actions runners got updated from version 20221204.1 to version 20221215.1 and we now get the error:
dyld[8848]: Library not loaded: '@rpath/libgcc_s.1.1.dylib'
Referenced from: '/usr/local/Cellar/gcc@11/11.3.0/lib/gcc/11/libgcc_s.1.dylib'
Reason: tried: '/usr/local/lib/libgcc_s.1.1.dylib' (no such file), '/usr/lib/libgcc_s.1.1.dylib' (no such file)
The main change seems to be an update from macOS 12.6.1 to macOS 12.6.2 (the macOS-11
runner images have the same issue).
Hello, please can you help me with the following issue:
Does the package support an interface to solve cutest problems with Knitro solver?
Thank you.
Currently on Python 3 we get the following warnings whenever sifdecode is called:
test_sifdecode_extras.py:21: ResourceWarning: unclosed file <_io.TextIOWrapper name=3 encoding='UTF-8'>
build_interface.py:333: ResourceWarning: unclosed file <_io.TextIOWrapper name=3 encoding='UTF-8'>
I've traced it to the p = subprocess.Popen(...)
lines in sifdecode_extras.py
and build_interface.py
, however doing the sensible thing and using with subprocess.Popen(...) as p:
fixes the warnings on Python 3 but breaks sifdecode on Python 2:
https://travis-ci.org/github/jfowkes/pycutest/jobs/673033735
Any thoughts on this? I'm confused.
After installing PyCUTEst as detailed in the documentation, I cannot compile CUTEst problems via PyCUTEst. The tests of the Fortran source files (both sifdecode
and cutest
) succeed, but not the import_problem
function.
I ran the following code:
# Example: building problem
import pycutest
# Find unconstrained, variable-dimension problems
probs = pycutest.find_problems(constraints='U', userN=True)
print(sorted(probs)[:5])
# Properties of problem ROSENBR
print(pycuttest.problem_properties('ROSENBR'))
# Print parameters for problem ARGLALE
pycutest.print_available_sif_params('ARGLALE')
# Build this problem with N=100, M=200
problem = pycutest.import_problem('ARGLALE', sifParams={'N':100, 'M':200})
print(problem)
I got the following result:
['ARGLINA', 'ARGLINB', 'ARGLINC', 'ARGTRIGLS', 'ARWHEAD']
{'objective': 'S', 'constraints': 'U', 'regular': True, 'degree': 2, 'origin': 'A', 'internal': False, 'n': 2, 'm': 0}
Parameters available for problem ARGLALE:
N = 10 (int)
N = 50 (int)
N = 100 (int)
N = 200 (int) [default]
M = 20 (int, .ge. N)
M = 100 (int, .ge. N)
M = 200 (int, .ge. N)
M = 400 (int, .ge. N) [default]
End of parameters for problem ARGLALE
gcc: error: .2-a+fp16+rcpc+dotprod+crypto: No such file or directory
gcc: error: .2-a+fp16+rcpc+dotprod+crypto: No such file or directory
gcc: error: unrecognized command line option ‘-n1’; did you mean ‘-n’?
gcc: error: unrecognized command line option ‘-n1’; did you mean ‘-n’?
error: command '/usr/bin/gcc' failed with exit code 1
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/tmr/anaconda3/envs/py39/lib/python3.9/site-packages/pycutest/build_interface.py", line 341, in import_problem
compile_and_install_interface(problemName, destination, sifParams, sifOptions, efirst, lfirst, nvfirst, quiet)
File "/home/tmr/anaconda3/envs/py39/lib/python3.9/site-packages/pycutest/build_interface.py", line 300, in compile_and_install_interface
raise RuntimeError("Failed to build the Python interface module")
RuntimeError: Failed to build the Python interface module
To install CUTEst, I choose the options advocated in the documentation.
I am running PyCUTEst on the following ARM-based infrastructure.
Details on the architecture:
Architecture: aarch64
Byte Order: Little Endian
CPU(s): 2
On-line CPU(s) list: 0,1
Thread(s) per core: 1
Core(s) per socket: 2
Socket(s): 1
NUMA node(s): 1
Vendor ID: 0x48
Model: 0
Stepping: 0x1
BogoMIPS: 200.00
L1d cache: 64K
L1i cache: 64K
L2 cache: 512K
L3 cache: 32768K
NUMA node0 CPU(s): 0,1
Flags: fp asimd evtstrm aes pmull sha1 sha2 crc32 atomics fphp asimdhp cpuid asimdrdm jscvt fcma dcpop asimddp asimdfhm
Version of GCC used:
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/aarch64-linux-gnu/7/lto-wrapper
Target: aarch64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 7.5.0-3ubuntu1~18.04' --with-bugurl=file:///usr/share/doc/gcc-7/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++ --prefix=/usr --with-gcc-major-version-only --program-suffix=-7 --program-prefix=aarch64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-multiarch --enable-fix-cortex-a53-843419 --disable-werror --enable-checking=release --build=aarch64-linux-gnu --host=aarch64-linux-gnu --target=aarch64-linux-gnu
Thread model: posix
gcc version 7.5.0 (Ubuntu/Linaro 7.5.0-3ubuntu1~18.04)
Version of GFortran used:
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/aarch64-linux-gnu/7/lto-wrapper
Target: aarch64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 7.5.0-3ubuntu1~18.04' --with-bugurl=file:///usr/share/doc/gcc-7/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++ --prefix=/usr --with-gcc-major-version-only --program-suffix=-7 --program-prefix=aarch64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-multiarch --enable-fix-cortex-a53-843419 --disable-werror --enable-checking=release --build=aarch64-linux-gnu --host=aarch64-linux-gnu --target=aarch64-linux-gnu
Thread model: posix
gcc version 7.5.0 (Ubuntu/Linaro 7.5.0-3ubuntu1~18.04)
As the free Travis CI is now deprecated and not running, we should switch our CI over to GitHub Actions. This should be relatively straightforward and largely a case of migrating the travis.yml file over to the GitHub Actions syntax.
Hi,
I follow the instruction in https://jfowkes.github.io/pycutest/_build/html/install.html to install cutest on Mac.
My mac version is Monterey 12.5. I use Pycharm with python 3.8 and gfortran 12.1
Then I run the tests in "Building Test Problem" of https://jfowkes.github.io/pycutest/_build/html/install.html
the first one "Find Problems", my output is fine
but the second one "Building Problems", my output is
Parameters available for problem ARGLALE:
N = 10 (int)
N = 50 (int)
N = 100 (int)
N = 200 (int) [default]
M = 20 (int, .ge. N)
M = 100 (int, .ge. N)
M = 200 (int, .ge. N)
M = 400 (int, .ge. N) [default]
End of parameters for problem ARGLALE
Traceback (most recent call last):
File "", line 8, in
File "/Applications/PyCharm.app/Contents/plugins/python/helpers/pydev/_pydev_bundle/pydev_umd.py", line 197, in runfile
pydev_imports.execfile(filename, global_vars, local_vars) # execute the script
File "/Applications/PyCharm.app/Contents/plugins/python/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
exec(compile(contents+"\n", file, 'exec'), glob, loc)
File "/Users/cengzhe/Documents/pythonproject/test.py", line 53, in
problem = pycutest.import_problem('ARGLALE', sifParams={'N':100, 'M':200})
File "/usr/local/anaconda3/envs/pythonProject/lib/python3.8/site-packages/pycutest/build_interface.py", line 348, in import_problem
return CUTEstProblem(import('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]),
File "/usr/local/anaconda3/envs/pythonProject/lib/python3.8/site-packages/pycutest/problem_class.py", line 82, in init
self.name = self._module.info['name']
AttributeError: module 'pycutest_cache_holder.ARGLALE_M200_N100' has no attribute 'info'
I check the ''ARGLALE_M200_N100' folder in 'pycutest_cache_holder' folder, there is indeed no such 'info' file. Why does this happen? Looking forward to your reply!
Hi, it seems that the pycutest still occupy much CPU memory and will not release if we didn't terminate the python program.
problems_name = ["HS7", "HS6", "HS56", "HS48", "HS60"]
tracemalloc.start()
for name in problems_name:
prob = pycutest.import_problem(name, drop_fixed_variables=True)
for i in range(2000):
x = prob.x0
g = prob.objcons(x)
del prob
gc.collect()
snapshot = tracemalloc.take_snapshot()
display_top(snapshot)
It is reported that the CPU memory is increasing...
Looking forward to your help, thanks!
Amazing work @jfowkes.
I would like to use the package in Ubuntu 20.04, with GCC 9.3 and gfortran 9.3 with default python 3.8.
Upon running the
python3 setup.py test
I get:
running test
WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox.
running egg_info
writing pycutest.egg-info/PKG-INFO
writing dependency_links to pycutest.egg-info/dependency_links.txt
writing requirements to pycutest.egg-info/requires.txt
writing top-level names to pycutest.egg-info/top_level.txt
reading manifest file 'pycutest.egg-info/SOURCES.txt'
writing manifest file 'pycutest.egg-info/SOURCES.txt'
running build_ext
runTest (pycutest.tests.test_basic_functionality.TestALLINITC_with_fixed) ... ERROR
runTest (pycutest.tests.test_basic_functionality.TestALLINITC_with_free) ... ERROR
runTest (pycutest.tests.test_basic_functionality.TestALLINITU) ... ERROR
runTest (pycutest.tests.test_basic_functionality.TestParamError) ... ok
runTest (pycutest.tests.test_basic_functionality.TestRemoval) ... ok
runTest (pycutest.tests.test_sifdecode_extras.TestAvailableParamsARGLALE) ... ok
runTest (pycutest.tests.test_sifdecode_extras.TestAvailableParamsBRATU) ... ok
runTest (pycutest.tests.test_sifdecode_extras.TestAvailableParamsROSENBR) ... ok
runTest (pycutest.tests.test_sifdecode_extras.TestClassification) ... ok
runTest (pycutest.tests.test_sifdecode_extras.TestFindProblems) ... ok
runTest (pycutest.tests.test_sifparam_chars.TestSROSENBR) ... ERROR
runTest (pycutest.tests.test_sparse_functionality.TestSparseConstrained) ... ERROR
runTest (pycutest.tests.test_sparse_functionality.TestSparseUnconstrained) ... ERROR
======================================================================
ERROR: runTest (pycutest.tests.test_basic_functionality.TestALLINITC_with_fixed)
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/yaser/pycutest/pycutest/tests/test_basic_functionality.py", line 174, in runTest
p = pycutest.import_problem('ALLINITC', drop_fixed_variables=False)
File "/home/yaser/pycutest/pycutest/build_interface.py", line 349, in import_problem
return CUTEstProblem(__import__('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]),
File "/home/yaser/pycutest/pycutest_cache/pycutest_cache_holder/ALLINITC/__init__.py", line 63, in <module>
(n, m)=_pycutestitf._dims()
Exception: Failed to open data file
For installation, I used the following
cd $HOME
git clone https://github.com/jfowkes/pycutest.git
export TRAVIS_BUILD_DIR=$HOME/pycutest ##example:$HOME/pycutest
cd $TRAVIS_BUILD_DIR
mkdir cutest
git clone https://github.com/ralna/ARCHDefs ./cutest/archdefs &&
git clone https://github.com/ralna/SIFDecode ./cutest/sifdecode &&
git clone https://github.com/ralna/CUTEst ./cutest/cutest &&
git clone https://bitbucket.org/optrove/sif ./cutest/mastsif
export ARCHDEFS="$HOME/pycutest/cutest/archdefs/"
export SIFDECODE="$HOME/pycutest/cutest/sifdecode"
export CUTEST="$HOME/pycutest/cutest/cutest"
export MASTSIF="$HOME/pycutest/cutest/mastsif/"
export MYARCH="pc64.lnx.gfo"
${ARCHDEFS}/install_optrove
#Manual says choose (5) GNU gfortran compiler but I chose (6)
# (5) GNU gfortran 7 compiler
# (6) GNU gfortran compiler
export PATH="${SIFDECODE}/bin:${PATH}"
export PATH="${CUTEST}/bin:${PATH}"
export MANPATH="${SIFDECODE}/man:${MANPATH}"
export MANPATH="${CUTEST}/man:${MANPATH}"
export MYARCH="pc64.lnx.gfo"
mkdir $TRAVIS_BUILD_DIR/pycutest_cache
export PYCUTEST_CACHE="$TRAVIS_BUILD_DIR/pycutest_cache"
export PYTHONPATH="${PYCUTEST_CACHE}:${PYTHONPATH}"
python3 setup.py install
python3 setup.py test
A very nice package for using CUTEst, thanks a lot for the work.
I can get the package to work, but I find the ${PYCUTEST_CACHE} environment variable a pain point
when working with multiple environments that use pycutest. It makes sense that this would be separate as you might want to manage a global CUTEst function cache but having to manually add it to the python path is a pain, especially when trying to replicate an install on someone else's computer.
sites-packages/pycutest/
folder.pycutest
is imported.These changes seem to superficially have the benefit of being backwards compatible.
I'm happy to do a PR with either or both of those things if you're interested but thought I'd bring it up first.
The latest version of NumPy has a deprecation warning:
pycutest/problem_class.py:673: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.)
ci = float(ci) # convert from 1x1 NumPy array to float
We should fix this sooner rather than later or there will be inevitable breakage.
Suggested upstream fix is to simply extract the first element (cf https://numpy.org/doc/stable/release/1.25.0-notes.html#deprecations):
float(a) # better: a[0] to get the numpy.float or a.item()
Describe the bug
A clear and concise description of what the bug is.
To Reproduce
Steps to reproduce the behaviour, including a code snippet showing how the error occurred
and any relevant Python output messages.
Information about your installation:
I use macos BugSur 11.7.1, the pycutest version is 1.4.Use the test file for the following test file and the following error appears in the screenshot.
Please instruct me how to correct it.I'd appreciate it if you could help me
ImportError Traceback (most recent call last)
in
----> 1 p = pycutest.import_problem('ROSENBR')
/anaconda3/lib/python3.7/site-packages/pycutest/build_interface.py in import_problem(problemName, destination, sifParams, sifOptions, efirst, lfirst, nvfirst, quiet, drop_fixed_variables)
334 problemDir = destination
335 # Import the module CACHE_SUBFOLDER.problemDir, and return a wrapper
--> 336 return CUTEstProblem(import('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]),
337 drop_fixed_variables=drop_fixed_variables)
338
~/Documents/pycutest_cache/pycutest_cache_holder/ROSENBR/init.py in
37 from future import absolute_import, division, print_function, unicode_literals
38
---> 39 from ._pycutestitf import *
40 from . import _pycutestitf
41 import os
ImportError: dlopen(/Users/ziyan/Documents/pycutest_cache/pycutest_cache_holder/ROSENBR/_pycutestitf.cpython-37m-darwin.so, 2): Symbol not found: __intel_fast_memcpy
Referenced from: /Users/ziyan/Documents/pycutest_cache/pycutest_cache_holder/ROSENBR/_pycutestitf.cpython-37m-darwin.so
Expected in: flat namespace
in /Users/ziyan/Documents/pycutest_cache/pycutest_cache_holder/ROSENBR/_pycutestitf.cpython-37m-darwin.so
It seems that there is something wrong with __intel_fast_memcpy. Does anyone know how to fix it? Thanks in advance.
Describe the bug
The path returned on line 36 in system_paths.py using os.path.join is missing the "/" at the beginning of the string:
https://github.com/jfowkes/pycutest/blob/master/pycutest/system_paths.py#L36
To Reproduce
import pycutest
Information about your installation:
Hello, Jaroslav and Lindon (and anyone else who is maintaining PyCUTEst),
First of all, thank you very much for making CUTEst available under Python. It has been playing an essential role during our development of COBYQA @ragonneau . I know it takes a huge effort to make this happen.
Is your feature request related to a problem? Please describe
Sorry if I overlooked something and this feature is already available. Is there an option/function that allows us to get all the problems compiled and saved, so that they do not need to be compiled again later? This question is relevant for two reasons. First, some difficult problems take a significant amount of time and computing power to compile. Second, the compilation may fail (due to various reasons, e.g., limited resources, or some uncovered bug somewhere) from time to time. It would be great if all the problems can be prepared beforehand (for only once), and users never need to worry about the compilation when using these problems for testing.
Describe the solution you'd like
Make it possible to get all the problems compiled and saved, so that they do not need to be compiled a second time. Sure, some problems accept some options when being compiled (e.g., dimension). In that case, we may only compile the problem with the default option.
Describe alternatives you've considered
You may see my package MatCUTEst, which is the MATLAB counterpart of PyCUTEst (sure, CUTEst already provides a MATLAB interface; MatCUTEst makes it easier to use). When MatCUTEst is installed, all the problems will be compiled (it may take some time). After that, all problems are available via the function macup
(an analog of pycutest.import_problem
), which does nothing more than locate the compiled problem without doing any compilation. This saves enormous time during the testing.
In addition, I also made a compiled version of MatCUTEst, which can be used without any compilation (of course, if works only for limited combinations of OS and MATLAB). With MatCUTEst, it is easy to use CUTEst in GitHub Actions, particularly with GitHub hosted runners, which would be rather time/resource-consuming if problems need to be compiled on the fly. It would be great if the same can be done for PyCUTEst. Anyone who wants to use PyCUTEst in CI would benefit.
Thank you very much for your attention.
Best regards,
Zaikun
Hi,
I was able to install the pycutest on my Mac and import it in python. However, when I try to run:
[GCC 4.2.1 Compatible Clang 4.0.1 (tags/RELEASE_401/final)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
import pycutest
p=pycutest.import_problem("ROSENBR")"
it returned the following:
=========================================================================================
dyld: Library not loaded: /usr/local/opt/gcc/lib/gcc/9/libgfortran.5.dylib
Referenced from: /usr/local/opt/sifdecode/libexec/objects/mac64.osx.gfo/double/run_sifdecode
Reason: image not found
/usr/local/opt/sifdecode/libexec/bin/sifdecoder: line 451: 2582 Abort trap: 6 $DECODER
ERROR: Error exit from decoding stage. terminating execution.
I'm wondering if you can help me with this issue. Many thanks!
Describe the bug
There are two ways to determine the dimensions of a CUTest problem using pycutest
: The problem properties and the problem itself. In some instances, these ways disagree.
To Reproduce
The following snippet
import pycutest
print("pycutest version:", pycutest.__version__)
name = "HATFLDBNE"
props = pycutest.problem_properties(name)
print(props)
print(f"Props: n = {props['n']}, m = {props['m']}")
problem = pycutest.import_problem(name)
print(problem)
print(f"Problem: n = {problem.n}, m = {problem.m}")
yields the following output:
pycutest version: 1.7.0
{'objective': 'none', 'constraints': 'other', 'regular': True, 'degree': 2, 'origin': 'academic', 'internal': False, 'n': 4, 'm': 0}
Props: n = 4, m = 0
CUTEst problem HATFLDBNE (default params) with 4 variables and 4 constraints
Problem: n = 4, m = 4
As can be seen, there is some ambiguity as to whether the problem has constraints (is m = 0 or m = 4?). It is possible to evaluate the constraints at the provided x0
, so I guess m = 4 is correct?
Information about your installation:
In build_interface.import_problem(), check that cache is in the Python path. Easiest way would be to add an ImportError catch to lines 341-342:
return CUTEstProblem(__import__('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]), drop_fixed_variables=drop_fixed_variables)
If this throws an ImportError, just try to import CACHE_SUBFOLDER - an ImportError here indicates the Python path can't see it. This will hopefully avoid issues when using IDEs, etc.
As pointed out by @ragonneau, setup.py
is being mostly replaced with pyproject.toml
:
https://packaging.python.org/en/latest/guides/modernize-setup-py-project/#modernize-setup-py-project
We should therefore switch PyCUTEst over to the modern pyproject.toml
way of installing things, especially as Python 12 no longer ships with setuptools
installed by default like it used to.
It may still be necessary to retain a very basic setup.py
so that we can read in the version.
Regrettably PyCUTEst v1.5.0 breaks existing cached problems (we had to fix a memory leak).
When upgrading to PyCUTEst v1.5.0, please clear out your cache by deleting the $PYCUTEST_CACHE/pycutest_cache_holder directory:
rm -r $PYCUTEST_CACHE/pycutest_cache_holder/
Failure to do so will result in errors of the form:
>>> pycutest.import_problem('ROSENBR')
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jari/Code/pycutest/pycutest/build_interface.py", line 345, in import_problem
return CUTEstProblem(importlib.import_module('%s.%s' % (CACHE_SUBFOLDER, problemDir)),
File "/home/jari/Code/pycutest/pycutest/problem_class.py", line 52, in __new__
module.info = module.setup() # setup CUTEst problem
AttributeError: module 'pycutest_cache_holder.ROSENBR' has no attribute 'setup'
The official CUTEst MATLAB interface has the sparse routines:
Tool CUTEst function Purpose
--------------------------------------------------------------------------
sobj uofg / cofsg Evaluate objective function value
and its sparse gradient if requested
sgrad ugr / cisgr Evaluate objective function or
constraint gradient as a sparse vector
These are the sparse equivalents of our existing obj
and grad
routines.
We should probably implement these in a similar way as done there:
https://github.com/ralna/CUTEst/blob/master/src/matlab/mcutest.c
First and foremost, thank you for implementing this Python CUTEst interface! I am very excited to use it. Unfortunately, my kernel dies and I receive the following error when trying to import a problem in Spyder (Python 3.6):
An error ocurred while starting the kernel
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (RANGE.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.13) than being linked (10.7)
ld: warning: object file (/usr/local/Cellar/cutest/2.0.0/libexec/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.13) than being linked (10.7)
Trying to debug this, I found that this error occurs at line 319 of build_interface.py:
return CUTEstProblem(__import__('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]), drop_fixed_variables=drop_fixed_variables)
Do you know by any chance why these warnings and error may be occurring and how it can be fixed?
I installed CUTEst and PyCUTEst using brew and pip following your instructions and am using Mac OS X 10.13.6 and CUTEst 2.0.0. Thanks in advance!
When I test an unconstrained optimization algorithm ,I found that reuse pycutest.import_problem
will lead the RAM increase fastly.
import pycutest
uncon = pycutest.find_problems(constraints='unconstrained', userN=True)
for prob in uncon:
p = pycutest.import_problem(prob)
Only exit Python can release RAM
Hi there, I met above error after installing cutest and pycutest. I hope to get some help on this! Thank you!
Here is more details:
I tried brew test cutest, brew test sifdecode, brew test mastsif, it all pass with no error reported.
The detailed error message:
Traceback (most recent call last):
File "/Users/zhengy/Documents/src/pdProj.py", line 1707, in <module>
main()
File "/Users/zhengy/Documents/src/pdProj.py", line 1682, in main
import pycutest
File "/Users/zhengy/opt/miniconda3/envs/env3.10/lib/python3.10/site-packages/pycutest/__init__.py", line 9, in <module>
from .build_interface import import_problem, clear_cache, all_cached_problems
File "/Users/zhengy/opt/miniconda3/envs/env3.10/lib/python3.10/site-packages/pycutest/build_interface.py", line 16, in <module>
from .install_scripts import get_setup_script
File "/Users/zhengy/opt/miniconda3/envs/env3.10/lib/python3.10/site-packages/pycutest/install_scripts.py", line 97, in <module>
""" % get_cutest_path() # will probably get the homebrew location, but may revert to environment variables
File "/Users/zhengy/opt/miniconda3/envs/env3.10/lib/python3.10/site-packages/pycutest/system_paths.py", line 40, in get_cutest_path
raise RuntimeError('Could not find CUTEST installation - have CUTEST and MYARCH environment variables been set correctly?')
RuntimeError: Could not find CUTEST installation - have CUTEST and MYARCH environment variables been set correctly?
I note that in the error message, the get_cutest_path() function in File "/Users/zhengy/opt/miniconda3/envs/env3.10/lib/python3.10/site-packages/pycutest/system_paths.py" raise this error, so I went into it. Here is the relavent codes: (I'm using Mac)
def get_cutest_path():
if sys.platform == 'darwin': # Mac
# First try environment variables, otherwise use default homebrew location
if 'CUTEST' in os.environ and 'MYARCH' in os.environ:
cutest_path = os.path.join(os.environ['CUTEST'], 'objects', os.environ['MYARCH'], 'double', 'libcutest.a')
if os.path.isfile(cutest_path):
return cutest_path
homebrew_path = os.path.join('usr', 'local', 'opt', 'cutest', 'lib', 'libcutest.a') # /usr/local/opt/cutest/lib/libcutest.a
if os.path.isfile(homebrew_path):
return homebrew_path
else:
raise RuntimeError('Could not find CUTEST installation - have CUTEST and MYARCH environment variables been set correctly?')
I'm confused bc I notices that "/usr/local/opt/cutest/lib/libcutest.a" is a valid file on my end.
$ pwd
/usr/local/opt/cutest/lib
$ ls
libcutest.a libcutest_double.a libcutest_single.a
libcutest.dylib libcutest_double.dylib libcutest_single.dylib
Thus, I don't know why it raises the RuntimeError and how to fix it. From my understanding, homebrew_path = os.path.join('usr', 'local', 'opt', 'cutest', 'lib', 'libcutest.a')
is a valid file and should be returned.
Please let me know if I need to provide further information. Thank you so much for the help!
Hi,
I tried to installed it both using pip and manually but when trying to load any problem I get the error:
Python 3.7.1 (default, Dec 14 2018, 19:28:38)
[GCC 7.3.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import pycutest
>>> p = pycutest.import_problem('ROSENBR')
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/opt/continuum/anaconda3/lib/python3.7/site-packages/pycutest/build_interface.py", line 336, in import_problem
return CUTEstProblem(__import__('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]),
File "/tmp/pycutestcache/pycutest_cache_holder/ROSENBR/__init__.py", line 63, in <module>
(n, m)=_pycutestitf._dims()
Exception: Failed to open data file
If I go the the directory where the $PYCUTEST_CACHE/pycutest_cache_holder/ROSENBR directory and look for its contents I get:
AUTOMAT.d build cutestitf.c ELFUN.f ELFUN.o EXTER.f EXTER.o GROUP.f GROUP.o __init__.py OUTSDIF.d __pycache__ PyCUTEst_automatic_test_function_interface_builder-1.0-py3.7.egg-info _pycutestitf.cpython-37m-x86_64-linux-gnu.so RANGE.f RANGE.o setup.py
Is your feature request related to a problem? Please describe
Currently, the gradient for an unconstrained problem can only be accessed along with either the objective or Hessian:
_, g = prob.obj(x, gradient = True)
g, _ = prob.gradhess(x)
A similar issue is true with constrained problems.
Describe the solution you'd like
Ideally, I'd like to have access to the gradient alone, i.e.,
g = prob.grad(x)
Describe alternatives you've considered
This isn't a blocking change for my work since accessing the gradient through the objective is sufficiently cheap, but this approach is aesthetically unpleasing.
Is your feature request related to a problem? Please describe
n/a
Describe the solution you'd like
We should add citation information to the README and documentation (beyond just the badge), to make it easy for everyone to see the citation info.
(I'm quite busy with other things right now, so putting this here mostly as a reminder to myself!)
Describe alternatives you've considered
n/a
Describe the bug
Failures may happen when loading problems. However, the previous state of the system, and in particular the current working directory, is not restored. See the example below
To Reproduce
import os, pycutest
try:
prob = pycutest.import_problem('SCURLY20', sifParams={'N': 10})
except RuntimeError:
print("Loading failed.")
print(os.getcwd())
This code returns the following error.
Problem name: SCURLY20
Double precision version will be formed
** Exit from INTERPRET_gpsmps - index parameter name S-9 not recognised
From within do loop ending on line 68, current line is
ZN Q-9 X-9 0.0000D+00 S-9 0.0000D+00
Return from INTERPRET_gpsmps, status = 3
Decoding failure, status = 3
ERROR: Error exit from decoding stage. terminating execution.
Loading failed.
Traceback (most recent call last):
File "mytest.py", line 8, in <module>
print(os.getcwd())
FileNotFoundError: [Errno 2] No such file or directory
Error in sys.excepthook:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/apport_python_hook.py", line 76, in apport_excepthook
binary = os.path.realpath(os.path.join(os.getcwd(), sys.argv[0]))
FileNotFoundError: [Errno 2] No such file or directory
Original exception was:
Traceback (most recent call last):
File "mytest.py", line 8, in <module>
print(os.getcwd())
FileNotFoundError: [Errno 2] No such file or directory
Information about your installation:
At the moment we have in install_scripts.py
on line 94 a hardcoded '/usr/local/gfortran/lib/' path for Mac, however this is causing an ugly linker warning to show up if not used:
ld: warning: directory not found for option '-L/usr/local/gfortran/lib/'
I'm thinking that instead we could add an optional environment variable that gets picked up in system_paths.py
if it is defined? That way we could avoid the potentially confusing warning.
Describe the bug
Although things work smoothly on Ubuntu, the compilation of problems cannot be done in parallel on macOS.
To Reproduce
I tried to run the following code:
import logging
import pycutest
from joblib import Parallel, delayed
def get_logger(name):
logger = logging.getLogger(__name__)
if len(logger.handlers) == 0:
logger.setLevel(logging.INFO)
# Attach a console handler (thread-safe).
handler = logging.StreamHandler()
handler.setFormatter(logging.Formatter('[%(levelname)-8s] %(message)s'))
logger.addHandler(handler)
return logger
@delayed
def load_problem(problem_name):
logger = get_logger(__name__)
logger.info(f'Loading {problem_name}')
try:
pycutest.import_problem(problem_name)
logger.info(f'{problem_name} successfully loaded')
except Exception as exc:
logger.warning(f'{problem_name} failed to load: {exc}')
if __name__ == '__main__':
problem_names = pycutest.find_problems(constraints='unconstrained', n=[1, 10])
Parallel(n_jobs=-1)(load_problem(problem_name) for problem_name in problem_names[:5])
This code attempts to load five problems. I assume here that PYCUTEST_CACHE
is set to a location where the problems have not already been compiled. I get the following output:
[INFO ] Loading SISSER
[INFO ] Loading PALMER5C
[INFO ] Loading CHWIRUT2LS
[INFO ] Loading BOXPOWER
[INFO ] Loading DENSCHNB
Fatal Python error: init_sys_streams: can't initialize sys standard streams
Python runtime state: core initialized
OSError: [Errno 9] Bad file descriptor
Current thread 0x00007ff8541ebb80 (most recent call first):
<no Python frame>
[WARNING ] SISSER failed to load: Failed to build the Python interface module
Fatal Python error: init_sys_streams: can't initialize sys standard streams
Python runtime state: core initialized
OSError: [Errno 9] Bad file descriptor
Current thread 0x00007ff8541ebb80 (most recent call first):
<no Python frame>
Fatal Python error: init_sys_streams: can't initialize sys standard streams
Python runtime state: core initialized
OSError: [Errno 9] Bad file descriptor
Current thread 0x00007ff8541ebb80 (most recent call first):
<no Python frame>
[WARNING ] DENSCHNB failed to load: Failed to build the Python interface module
[WARNING ] CHWIRUT2LS failed to load: Failed to build the Python interface module
Fatal Python error: init_sys_streams: can't initialize sys standard streams
Python runtime state: core initialized
OSError: [Errno 9] Bad file descriptor
Current thread 0x00007ff8541ebb80 (most recent call first):
<no Python frame>
[WARNING ] PALMER5C failed to load: Failed to build the Python interface module
Fatal Python error: init_sys_streams: can't initialize sys standard streams
Python runtime state: core initialized
OSError: [Errno 9] Bad file descriptor
Current thread 0x00007ff8541ebb80 (most recent call first):
<no Python frame>
[WARNING ] BOXPOWER failed to load: Failed to build the Python interface module
What is strange to me is that this code works correctly on Ubuntu.
Information about your installation:
When trying to import a problem
probname = "ROSENBR"
ct = pycutest.import_problem(probname, quiet=False)
the following exception gets thrown. It looks like something is wrong with the resulting .so
module file. The module file exists after the exception was thrown.
Problem name: ROSENBR
Double precision version will be formed
The objective function uses 1 linear group
The objective function uses 1 nonlinear group
There are 2 free variables
File successfully decoded
gfortran -fPIC -c GROUP.f
gfortran -fPIC -c EXTER.f
gfortran -fPIC -c RANGE.f
gfortran -fPIC -c ELFUN.f
pydev debugger: process 36500 is connecting
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
running build
running build_ext
building '_pycutestitf' extension
creating build
creating build/temp.linux-x86_64-3.7
gcc-9.1.0 -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DLINUX -I/PATH/python-374/lib/python3.7/site-packages/numpy/core/include/numpy -I/system/PATH/cutest/cutest/include/ -I/PATH/python-374/include/python3.7m -c cutestitf.c -o build/temp.linux-x86_64-3.7/cutestitf.o
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
creating build/lib.linux-x86_64-3.7
gcc-9.1.0 -pthread -shared build/temp.linux-x86_64-3.7/cutestitf.o GROUP.o RANGE.o EXTER.o ELFUN.o /PATH/cutest/cutest/objects/pc64.lnx.gfo/double/libcutest.a -lgfortran -o build/lib.linux-x86_64-3.7/_pycutestitf.cpython-37m-x86_64-linux-gnu.so
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: process 36623 is connecting
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
pydev debugger: warning: trying to add breakpoint to file that does not exist: /usr/lib/python3.7/site-packages/sympy/matrices/matrices.py (will have no effect)
running install
running build
running build_ext
running install_lib
copying build/lib.linux-x86_64-3.7/_pycutestitf.cpython-37m-x86_64-linux-gnu.so -> .
running install_egg_info
Writing ./PyCUTEst_automatic_test_function_interface_builder-1.0-py3.7.egg-info
Traceback (most recent call last):
File "/system/PATH/.pycharm_helpers/pydev/pydevd.py", line 1741, in <module>
main()
File "/system/PATH/.pycharm_helpers/pydev/pydevd.py", line 1735, in main
globals = debugger.run(setup['file'], None, None, is_module)
File "/system/PATH/.pycharm_helpers/pydev/pydevd.py", line 1135, in run
pydev_imports.execfile(file, globals, locals) # execute the script
File "/system/PATH/.pycharm_helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
exec(compile(contents+"\n", file, 'exec'), glob, loc)
File "/system/PATH2/cutest_test.py", line 14, in <module>
ct = pycutest.import_problem(probname, quiet=False)
File "/system/PATHS/python-374/lib/python3.7/site-packages/pycutest/build_interface.py", line 336, in import_problem
return CUTEstProblem(__import__('%s.%s' % (CACHE_SUBFOLDER, problemDir), globals(), locals(), [str(problemDir)]),
File "/PATH/pycutest_cache_folder/pycutest_cache_holder/ROSENBR/__init__.py", line 63, in <module>
(n, m)=_pycutestitf._dims()
Exception: Failed to open data file
Somethings is odd here. Can you help me?
A common error amongst our users is when CUTEst is compiled with a different compiler to that which the Python environment is using (see e.g. #2, #7, #14).
By default our automatic shell script installer should pick up the shell default gfortran:
$ gofrtran --version
but for some users this is not the same as that picked up by their Python interpreter:
python3 -c 'import subprocess; subprocess.call(["gfortran", "--version"])’
which is what PyCUTEst uses by default.
This situation then leads to the dreaded and very user-unfriendly error:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File ".../python3.6/site-packages/pycutest/build_interface.py", line 347, in import_problem
drop_fixed_variables=drop_fixed_variables)
File ".../python3.6/site-packages/pycutest/problem_class.py", line 52, in __new__
[module.info](http://module.info/) = module.setup() # setup CUTEst problem
File ".../CUTEST/pycutest_cache/pycutest_cache_holder/ARGLALE_M200_N100/__init__.py", line 69, in setup
(n, m)=_pycutestitf.dims()
Exception: Failed to open data file
The question is, can we handle this error more gracefully than at present?
Should we change the shell script to automatically detect the python gfortran?
Does this interface support ARM-based computers? I didn't read anything like that in the README, so hopefully I'm not missing something obvious. CUTEst itself seems to be working properly at first glance, although I couldn't do much testing.
I get the following output, when I try to run the example for building problems available at https://jfowkes.github.io/pycutest/_build/html/building.html#building-problems:
Parameters available for problem ARGLALE:
N = 10 (int)
N = 50 (int)
N = 100 (int)
N = 200 (int) [default]
M = 20 (int, .ge. N)
M = 100 (int, .ge. N)
M = 200 (int, .ge. N)
M = 400 (int, .ge. N) [default]
End of parameters for problem ARGLALE
ld: warning: ignoring file RANGE.o, building for macOS-x86_64 but attempting to link with file built for unknown-arm64
ld: warning: ignoring file /opt/homebrew/opt/cutest/libexec/objects/mac64.osx.gfo/double/libcutest.a, building for macOS-x86_64 but attempting to link with file built for macOS-arm64
ld: warning: ignoring file GROUP.o, building for macOS-x86_64 but attempting to link with file built for unknown-arm64
ld: warning: ignoring file EXTER.o, building for macOS-x86_64 but attempting to link with file built for unknown-arm64
ld: warning: ignoring file ELFUN.o, building for macOS-x86_64 but attempting to link with file built for unknown-arm64
Traceback (most recent call last):
File "/Users/uni/Desktop/cutest/building_problems.py", line 8, in
problem = pycutest.import_problem('ARGLALE', sifParams={'N':100, 'M':200})
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/cutest/lib/python3.11/site-packages/pycutest/build_interface.py", line 354, in import_problem
raise error
File "/opt/anaconda3/envs/cutest/lib/python3.11/site-packages/pycutest/build_interface.py", line 345, in import_problem
return CUTEstProblem(importlib.import_module('%s.%s' % (CACHE_SUBFOLDER, problemDir)),
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/cutest/lib/python3.11/importlib/init.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "", line 1206, in _gcd_import
File "", line 1178, in _find_and_load
File "", line 1149, in _find_and_load_unlocked
File "", line 690, in _load_unlocked
File "", line 940, in exec_module
File "", line 241, in _call_with_frames_removed
File "/Users/uni/pycutest_cache/pycutest_cache_holder/ARGLALE_M200_N100/init.py", line 38, in
from ._pycutestitf import *
ImportError: dlopen(/Users/uni/pycutest_cache/pycutest_cache_holder/ARGLALE_M200_N100/_pycutestitf.cpython-311-darwin.so, 0x0002): symbol not found in flat namespace 'cutest_cdh'
Any feedback or tips to guide me in the right direction would be greatly appreciated.
Hi,
I updated my Mac OS system several days ago. When I run the PyCUTEst today, it returns some warnings and a Segmentation fault:
ld: warning: directory not found for option '-L/usr/local/gfortran/lib/'
ld: warning: object file (RANGE.o) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (EXTER.o) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (ELFUN.o) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (GROUP.o) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cdh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cdimen.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cdimsh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cdimsj.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cfn.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cidh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ccfg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ccfsg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ccifg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ccifsg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cgr.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cgrdh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(chprod.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cjprod.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cofg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(csetup.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(csgr.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(csgrsh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(uhprod.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(uofg.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cish.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(connames.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(creport.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(csh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cvartype.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(probname.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(udh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(udimsh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ugrdh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ugrsh.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ureport.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(usetup.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(ush.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(uvartype.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(varnames.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(fortran_ops.o)) was built for newer OSX version (10.14) than being linked (10.9)
ld: warning: object file (/Users/ziyan/Documents/Github/cutest/cutest/objects/mac64.osx.gfo/double/libcutest.a(cutest.o)) was built for newer OSX version (10.14) than being linked (10.9)
Segmentation fault: 11
Do you know why it happens and how to fix it? Many thanks!
Hi, when i use pycutest.import_prolem(), i get the following error:
from ._pycutestitf import *
ImportError: dlopen(/Users/username/pycutest_cache/pycutest_cache_holder/BT9/_pycutestitf.cpython-38-darwin.so, 0x0002): symbol not found in flat namespace 'cutest_cdh'
May i ask how to solve it? Thanks very much!
CUTEst 2.2 added routines for the (Fritz) John function, defined as
(for more details please see https://en.wikipedia.org/wiki/Fritz_John_conditions)
The following new routines have been added to CUTEst 2.2:
We should add support for these in PyCUTEst as appropriate.
The macOS CI tests have started failing, it looks like the gfortran library can no longer be found:
dyld: Library not loaded: /usr/local/opt/gcc/lib/gcc/11/libgfortran.5.dylib
Reason: image not found
Is there a way to get the optimal values for the testfunctions? Also is there a way to get the parameters where the optimal value is attained?
Hi everyone, I am a new user to pycutest
package. I used the function probs = pycutest.find_problems(constraints='equality')
to find test problems with equality constraints only. I found 19 problems in total. However, as I typed the command probs.m
, for all of them, the output is 0, which implies that all test problem I found have no constraints. I had no idea where I did wrong. Thank you for any suggestions.
When installing PyCUTEst via pip install pycutest
, the required dependency setuptools
is not installed alongside. This is important because setuptools
is no longer shipped by default with Python starting from Python 3.12.
I see it appears in requirements.txt
, but I suppose setup.py
should be modified to add setuptools
somewhere.
Cheers,
Tom.
Hi,
I was following the documentation "Installing CUTEst on Linux", and I ran the command
/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/jfowkes/pycutest/master/.install_cutest.sh)"
And I got the error below:
$ /bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/jfowkes/pycutest/master/.install_cutest.sh)"
Build schedule:
- SIFDecode from
/home/cutest/sifdecode/
- CUTEst from
- /home/cutest/cutest/
Version for architecture pc64.lnx.gfo will be installed
Installing SIFDecode ...
Installing the double precision version
compiling in /home/cutest/sifdecode//src with the comand
/usr/bin/make -s -f /home/cutest/sifdecode//makefiles/pc64.lnx.gfo all
Compiling sifdecode /bin/sh: gfortran-12: command not found
=> Disabling optimization /bin/sh: line 2: gfortran-12: command not found
make[1]: *** [/home/cutest/sifdecode//objects/pc64.lnx.gfo/double/libsifdecode.a(sifdecode.o)] Error 127
make: *** [all_double] Error 2
Could you please give some advice? Thanks a lot!
By the way, gfortran -v
gives me gcc version 6.2.0 (GCC)
.
I'm currently not able to set the problem dimension in the sifParams option for some of the CUTEst problems. When trying to set N to be 500 for the SROSENBR problem, I receive the following error:
Traceback (most recent call last):
File "main.py", line 35, in <module>
problem = utils.CUTEstProblem(args.problem_name, args.N, args.print_sif, args.eps_f, args.eps_g)
File "/home/hjmshi/BFGS_with_Errors/utils.py", line 46, in __init__
self.problem = pycutest.import_problem(problem_name, sifParams=self.sif_params)
File "/home/hjmshi/anaconda3/lib/python3.6/site-packages/pycutest/build_interface.py", line 328, in import_problem
objList = decode_and_compile_problem(problemName, destination, sifParams, sifOptions, quiet)
File "/home/hjmshi/anaconda3/lib/python3.6/site-packages/pycutest/build_interface.py", line 206, in decode_and_compile_problem
raise RuntimeError('SIFDECODE error: %s' % param_error)
RuntimeError: SIFDECODE error: Failed setting N to 500
I've tried clearing the cache but it doesn't help. I've checked to make sure that this is an sifParams option using the print_available_sif_params
function, which gives this:
Parameters available for problem SROSENBR:
N/2 = 5 (int, n = 10 original value)
N/2 = 25 (int, n = 50)
N/2 = 50 (int, n = 100)
N/2 = 250 (int, n = 500)
N/2 = 500 (int, n = 1000)
N/2 = 2500 (int, n = 5000) [default]
N/2 = 5000 (int, n = 10000)
End of parameters for problem SROSENBR
Could I get some help on where to start debugging this? Thanks in advance!
Regrettably PyCUTEst v1.5.0 breaks existing cached problems (we had to fix a memory leak).
When upgrading to PyCUTEst v1.5.0, please clear out your cache by deleting the $PYCUTEST_CACHE/pycutest_cache_holder directory:
rm -r $PYCUTEST_CACHE/pycutest_cache_holder/
Failure to do so will result in errors of the form:
>>> pycutest.import_problem('ROSENBR')
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jari/Code/pycutest/pycutest/build_interface.py", line 345, in import_problem
return CUTEstProblem(importlib.import_module('%s.%s' % (CACHE_SUBFOLDER, problemDir)),
File "/home/jari/Code/pycutest/pycutest/problem_class.py", line 52, in __new__
module.info = module.setup() # setup CUTEst problem
AttributeError: module 'pycutest_cache_holder.ROSENBR' has no attribute 'setup'
Describe the bug
When I tried to find problems as the tutorial using
probs = pycutest.find_problems(constraints='unconstrained', userN=True), I got the following error message.
Traceback (most recent call last):
File "", line 1, in
File "/local/scratch/szhao89/optim/lib/python3.8/site-packages/pycutest/sifdecode_extras.py", line 294, in find_problems
data=problem_properties(name)
File "/local/scratch/szhao89/optim/lib/python3.8/site-packages/pycutest/sifdecode_extras.py", line 234, in problem_properties
'origin': cfDict['origin'][cfString[5].upper()],
KeyError: 'S'
However, other functions work. For example, I can run
p = pycutest.import_problem('ROSENBR').
Information about your installation:
I just followed the instruction to install cutest and compile it.
Thanks for your help!
As mentioned in the JOSS pull request: the error message when using hess (or sphess) and not passing in a Lagrange multiplier vector v for a constrained problem is not very friendly:
Traceback (most recent call last):
File "/Users/jari/s_matrix.py", line 20, in <module>
H = prob.sphess(x0) # Sparse Hessian (COO)
File "/usr/local/lib/python3.9/site-packages/pycutest/problem_class.py", line 667, in sphess
self.check_input_v(v)
File "/usr/local/lib/python3.9/site-packages/pycutest/problem_class.py", line 225, in check_input_v
elif v.shape != (self.m,):
AttributeError: 'NoneType' object has no attribute 'shape'
My suggestion here is:
prob.hess(x)
, prob.ihess(x)
, prob.sphess(x)
and prob.isphess(x)
all return the Hessian of the objectiveprob.hess(x, v)
and prob.sphess(x, v)
return the Hessian of the Lagrangian@jfowkes - it seems that your instinct was that hess(x)
returns the Hessian of the objective even for constrained problems, hence the issue.
ld: warning: dylib (/opt/homebrew/Cellar/gcc/10.2.0_4/lib/gcc/10/libstdc++.dylib) was built for newer macOS version (11.2) than being linked (11.0)
The main page with all the interface functions is hard to navigate - needs cleaning up (including links between list of available functions and definition, or entries on the LHS index sidebar, etc).
Needs some work because doc generation was automated with Sphinx autodoc extension (not sure how to modify). Alternatively, migrate everything into the rst files directly (not as nice, but at least it's fully configurable).
Hello!
First I would sincerely thank you for developing such a great interface, however, while using pyCUTEst, I noticed some issue related to problem import and objective function call for some problem instances.
Namely, problems 'WAYSEA1NE'
and 'HIMMELBA'
triggers AttributeError: module 'pycutest_cache_holder.WAYSEA1NE' has no attribute 'info'
when I import them via pycutest.import_problem()
.
Also, for some problems, the function value and gradient are evaluated to 0.0, array([0.0, 0.0])
, respectively, at the initial point for that problem, via calling problem.obj(problem.x0, gradient=True)
. I also tried obtaining the function value for a few points close to the initial point, which also gives the function value and gradient being all 0. I'm wondering if this is an issue related to my usage or the interface itself.
Here's the list of problems with the issue mentioned above: ['BEALENE','BOXBOD','BROWNBSNE','CLUSTER', 'DANIWOOD','DANWOOD','DENSCHNCNE','ELATVIDUNE', 'EXPFITNE','FBRAIN','FBRAINNE','GBRAIN','GOTTFR', 'HIMMELBC','HIMMELBD','HS1NE','HS8','HYPCIR', 'JENSMPNE','JUDGENE','MISRA1A','MISRA1B','MISRA1C', 'MISRA1D','POWELLBS','POWELLSQ','PRICE3NE', 'PRICE4NE','RSNBRNE','S308NE','SINVALNE','WAYSEA2NE']
I attached a pdf file illustrating the two issues I mentioned above.
I sincerely appreciate your time taking a look into my issue.
Best wishes,
Yihe
pyCUTEst issue.pdf
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