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academic-kickstart's Introduction

Joshua Cook

Computational genomics researcher at Vertex Pharmaceuticals.

jhrcook joshdoesa ORCID

For more information about myself, interests, and hobbies, checkout my website, CV, or resume (updates and tailored resumes coming soon). Feel free to get in touch!


๐Ÿ‘จ๐Ÿปโ€๐Ÿ’ป Projects

Currently, I'm working on the 2023 Advent of Code in my attempt to learn the Rust programming language.

To learn new skills and play with fun tools, I have worked on a variety of personal side-projects including

I've also made small contributions to other projects such as snakemake and the Fig autocomplete repository.

๐Ÿ“ Most recent blogs posts

All of my blog posts can be found here.

๐Ÿ“ž Connect with me

joshdoesa LinkedIn bostonprick https://joshuacook.netlify.app/post/index.xml

๐Ÿ’ธ Support me

joshuacook

Buy Me a Coffee at ko-fi.com




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academic-kickstart's Issues

Scrape data from Goodreads

Scrape data from my Goodreads profile and make a page with the books I've read, separated by year, and star ratings. I can also indicate which books I'm currently reading and my progress. Links to any reviews, too. This would be a cool project to have run on CI and automatically update.

Visualizing MCMC

Fit a simple model with PyMC and save the warm-up samples to watch the chains converge to the typical set of the posterior distribution. Conduct the same experimentation with different MCMC approaches: Gibbs sampling, MH, HMC, and NUTS HMC.

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