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16S rRNA amplicon sequencing analysis workflow using QIIME2
Scripts and other material relevant to estimating the D1 and D2 introgression statistics (see Hibbins & Hahn 2019, Genetics).
A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.
Enhancing {ggplot2} plots with statistical analysis 📊📣
Raw scripts for the Jaltomata phylogenomics project. Publication: Wu, M., Kostyun, J. L., Hahn, M. W., & Moyle, L. C. (2018). Dissecting the basis of novel trait evolution in a radiation with widespread phylogenetic discordance. Molecular Ecology, 27, 3301-3316.
Phylogenetic orthology inference for comparative genomics
permutation tests and confidence sets
Genome assembly evaluation tool
A GitBook version of the R Crash Course self-tutorials: https://colauttilab.github.io/RCrashCourse
Scripts for analysis used for speciation genomics
A repository for working through the Bayesian statistics book "Statistical Rethinking" by Richard McElreath.
Tutorials on phylogenetic and phylogenomic inference
My solutions to the well know Introduction to Computer Science with Python book by John Zelle. Several years after going through this book, I still recommend it as one of the best examples of computer science pedagogy I've seen to date.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.