Jonah Procyk's Projects
settings for CLion
Convolutional Restricted Boltzmann Machine
Rewrite of hanm code to work with my coarse grained networks
A collection of small extensions to Keras (RBM, momentum schedule, ..)
💡 Learnergy is a Python library for energy-based machine learning models.
Backend for driving oxDNA simulations from oxView.
A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings
oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis
A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA
ML applied to phage display sequence data
Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
Creation of a sampler for creating Coarse-Grain representations
Tensors and Dynamic neural networks in Python with strong GPU acceleration
Small collection of pytorch Models for aptamer sequence data
TCR_Data Analysis Python Scripts