kbastani / docker-neo4j Goto Github PK

$ docker run -d -p 7474:7474 -v /Users/anentropic/Documents/Dev/proj/data:/opt/data --name neo4j kbastani/docker-neo4j
be4c2e97421c977889b64448da3a3001e3364879b15be07f36229a8547674626

$ docker ps
CONTAINER ID        IMAGE                   COMMAND                CREATED             STATUS              PORTS                              NAMES
be4c2e97421c        kbastani/docker-neo4j   "/etc/bootstrap.sh -   3 seconds ago       Up 3 seconds        1337/tcp, 0.0.0.0:7474->7474/tcp   neo4j

$ docker exec -it neo4j bash
Error response from daemon: Container neo4j is not running

$ docker logs neo4j
Starting Neo4j Server console-mode...
Using additional JVM arguments:  -server -XX:+DisableExplicitGC -Dorg.neo4j.server.properties=conf/neo4j-server.properties -Djava.util.logging.config.file=conf/logging.properties -Dlog4j.configuration=file:conf/log4j.properties -XX:+UseConcMarkSweepGC -XX:+CMSClassUnloadingEnabled -XX:-OmitStackTraceInFastThrow -XX:hashCode=5 -Dneo4j.ext.udc.source=debian
2015-07-06 21:03:37.793+0000 INFO  [API] Setting startup timeout to: 120000ms based on 120000
2015-07-06 21:03:40.265+0000 INFO  [API] Successfully started database
2015-07-06 21:03:40.402+0000 INFO  [API] Successfully shutdown Neo4j Server.
2015-07-06 21:03:40.512+0000 INFO  [API] Successfully stopped database

any ideas?

Hi, I did submit below to main docker github for evaluation, maybe it has to do with OS/docker combination, appreciate your feedback and guide

environment

[amilkowski@localhost ~]$ uname -a
Linux localhost.localdomain 3.10.0-229.1.2.el7.x86_64 #1 SMP Thu Mar 26 09:10:25 CDT 2015 x86_64 x86_64 x86_64 GNU/Linux
[amilkowski@localhost ~]$ docker -v
Docker version 1.5.0-dev, build fc0329b/1.5.0

running:

Scientific Linux release 7.1 (Nitrogen)
cpe:/o:redhat:enterprise_linux:7.1:ga

which really is Centos 7

trying to do neo4j docker from https://github.com/kbastani/docker-neo4j

docker pull kbastani/docker-neo4j
docker run -d -p 7474:7474 -v /home/amilkowski/data:/opt/data --name graphdb kbastani/docker-neo4j
container exists..

[amilkowski@localhost ~]$ sudo docker run -d -p 7474:7474 -v /home/amilkowski/data:/opt/data --name graphdb kbastani/docker-neo4j
2b2d38d3cfa1519f17fe896f37e6f66a743895f5ddabf099bba1ac3eff16ed8d
[amilkowski@localhost ~]$ sudo docker ps -a
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2b2d38d3cfa1 kbastani/docker-neo4j:latest "/etc/bootstrap.sh - 3 seconds ago Exited (0) Less than a second ago graphdb

[amilkowski@localhost ~]$

IF I remove host to container mount override container runs (-v /home/amilkowski/data:/opt/data) below

so it does look like the feature of docker "mounting volumes from host" might be broken.. (ref. http://docs.docker.com/userguide/dockervolumes/)

[amilkowski@localhost ~]$ sudo docker ps -a
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
26e3d3bcd81d kbastani/docker-neo4j:latest "/etc/bootstrap.sh - 4 seconds ago Up 3 seconds 1337/tcp, 0.0.0.0:7474->7474/tcp graphdb

Hi, on os X, docker run exits immediately with the following in messages.log:
(37 files and folders created in graph.db/)

2015-12-02 20:47:29.845+0000 INFO [o.n.k.EmbeddedGraphDatabase]: Database is now ready
2015-12-02 20:47:29.845+0000 INFO [o.n.s.d.LifecycleManagingDatabase]: Successfully started database
2015-12-02 20:47:29.846+0000 INFO [o.n.k.i.DiagnosticsManager]: --- SERVER STARTED START ---
2015-12-02 20:47:29.901+0000 ERROR [o.n.s.r.RrdFactory]: Unable to create new rrd store
java.io.IOException: Invalid argument
at sun.nio.ch.FileChannelImpl.map0(Native Method) ~[na:1.8.0_66-internal]
at sun.nio.ch.FileChannelImpl.map(FileChannelImpl.java:925) ~[na:1.8.0_66-internal]
at org.rrd4j.core.RrdNioBackend.mapFile(RrdNioBackend.java:63) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdNioBackend.setLength(RrdNioBackend.java:86) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdDb.(RrdDb.java:148) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdDb.(RrdDb.java:101) ~[rrd4j-2.2.jar:na]
at org.neo4j.server.rrd.RrdFactory.createRrdb(RrdFactory.java:200) [neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.rrd.RrdFactory.createRrdDbAndSampler(RrdFactory.java:95) [neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:216) [neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:117) [neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:69) [neo4j-server-2.2.3.jar:2.2.3]
2015-12-02 20:47:29.902+0000 INFO [o.n.s.CommunityNeoServer]: Successfully shutdown Neo4j Server.
2015-12-02 20:47:29.903+0000 INFO [o.n.k.EmbeddedGraphDatabase]: Shutdown started
2015-12-02 20:47:29.904+0000 INFO [o.n.k.EmbeddedGraphDatabase]: Database is now unavailable
2015-12-02 20:47:29.963+0000 INFO [o.n.k.NeoStoreDataSource]: NeoStore closed
2015-12-02 20:47:29.964+0000 INFO [o.n.k.i.DiagnosticsManager]: --- STOPPING diagnostics START ---
2015-12-02 20:47:29.964+0000 INFO [o.n.k.i.DiagnosticsManager]: --- STOPPING diagnostics END ---
2015-12-02 20:47:29.971+0000 INFO [o.n.s.d.LifecycleManagingDatabase]: Successfully stopped database
2015-12-02 20:47:29.972+0000 ERROR [o.n.s.CommunityBootstrapper]: Failed to start Neo Server on port [7474]
org.neo4j.server.ServerStartupException: Starting Neo4j Server failed: java.io.IOException: Invalid argument
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:258) ~[neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.Bootstrapper.start(Bootstrapper.java:117) [neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.Bootstrapper.main(Bootstrapper.java:69) [neo4j-server-2.2.3.jar:2.2.3]
Caused by: java.lang.RuntimeException: java.io.IOException: Invalid argument
at org.neo4j.server.rrd.RrdFactory.createRrdb(RrdFactory.java:205) ~[neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.rrd.RrdFactory.createRrdDbAndSampler(RrdFactory.java:95) ~[neo4j-server-2.2.3.jar:2.2.3]
at org.neo4j.server.AbstractNeoServer.start(AbstractNeoServer.java:216) ~[neo4j-server-2.2.3.jar:2.2.3]
... 2 common frames omitted
Caused by: java.io.IOException: Invalid argument
at sun.nio.ch.FileChannelImpl.map0(Native Method) ~[na:1.8.0_66-internal]
at sun.nio.ch.FileChannelImpl.map(FileChannelImpl.java:925) ~[na:1.8.0_66-internal]
at org.rrd4j.core.RrdNioBackend.mapFile(RrdNioBackend.java:63) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdNioBackend.setLength(RrdNioBackend.java:86) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdDb.(RrdDb.java:148) ~[rrd4j-2.2.jar:na]
at org.rrd4j.core.RrdDb.(RrdDb.java:101) ~[rrd4j-2.2.jar:na]
at org.neo4j.server.rrd.RrdFactory.createRrdb(RrdFactory.java:200) ~[neo4j-server-2.2.3.jar:2.2.3]
... 4 common frames omitted

Is it possible to configure the heap size through the runtime environment?

Also, I'm a bit confused by the config file which contains:
wrapper.java.initmemory=12000

Does this imply that the image requires 12G?

I am unable to connect to the database using the bolt protocol :/ the browser console seems to have the same problem.