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Type: Organization
Type: Organization
A PyTorch Basecaller for Oxford Nanopore Reads
Analysis of Single Molecule Footprinting (SMF) data for the analysis of DNA methylation, chromatin accessibility and TF binding. The repository contains all primary code to reproduce the main analyses for the publication "Single molecule footprinting identifies context-dependent regulation of enhancers by DNA methylation" (Kreibich et al., 2023)
Datasets for predoc course
R package for SMF data analysis
Basic functions for single molecule TF analysis
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