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ksahlin avatar ksahlin commented on July 19, 2024

Interesting, thanks for reporting! If you provide me the link to the transcript and genome that you use I can try to exactly replicate what you did which will make it easier for me to figure out what is going on.

Are you using uLTRA v0.0.4.2? This version contains a bugfix, but I am not sure if what you are observing is related to that fix.

from ultra.

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