Comments (3)
ooh, wait...sorry, I have goofed. my reads file is corrupted. Please ignore this issue for now... I will post again when I've got the correct, working files and passed the test
apologies
Mike
from ultra.
all is well!
(at least, I need to get the mumMER software working now to get around the slaMEM bug that you outline in your notes :)
thanks, closing this "non-issue" apologies again!
Mike
from ultra.
Okay, thanks! Let me know if you run into other troubles. I'm just back from vacation and will be more responsive from now.
from ultra.
Related Issues (20)
- ultra installation and run error HOT 7
- CIGAR string starts/ends with N HOT 7
- Mapping with uLTRA without GTF? HOT 3
- Cigar is None HOT 2
- BUG -4294967296 HOT 8
- Controlling (high) uLTRA RAM usage HOT 1
- a bug of `--alignment_threshold` HOT 1
- Out of bound reads HOT 13
- Genomes FASTA/GTF files needed to run the evaluation HOT 4
- Can not access local variable 'read_mems_tmp' when using --use_NAM_seeds HOT 2
- Error: invalid feature coordinates (end<start!) at line: HOT 1
- Bug with uLTRA align : TypeError: bad argument type for built-in operation HOT 3
- UnboundLocalError: local variable 'i' referenced before assignment HOT 4
- Can I use ultra to align est to references HOT 1
- error when aligning direct RNA data during revcomp script HOT 3
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- Non-absolute paths don't resolve HOT 5
- Python bindings? HOT 1
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from ultra.