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installation failing from source
Hi, I'm using the rocker/verse docker image and attempting to install this package, however it is failing during compilation, with no clear message why
Here is the stdout after running install.packages():
f95 -fpic -g -O2 -c altmov.f -o altmov.o
f95 -fpic -g -O2 -c bigden.f -o bigden.o
f95 -fpic -g -O2 -c biglag.f -o biglag.o
f95 -fpic -g -O2 -c bobyqa.f -o bobyqa.o
f95 -fpic -g -O2 -c bobyqb.f -o bobyqb.o
f95 -fpic -g -O2 -c lagmax.f -o lagmax.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c minqa.cpp -o minqa.o
f95 -fpic -g -O2 -c newuoa.f -o newuoa.o
f95 -fpic -g -O2 -c newuob.f -o newuob.o
f95 -fpic -g -O2 -c prelim.f -o prelim.o
f95 -fpic -g -O2 -c rescue.f -o rescue.o
f95 -fpic -g -O2 -c trsapp.f -o trsapp.o
f95 -fpic -g -O2 -c trsbox.f -o trsbox.o
f95 -fpic -g -O2 -c trstep.f -o trstep.o
f95 -fpic -g -O2 -c uobyqa.f -o uobyqa.o
f95 -fpic -g -O2 -c uobyqb.f -o uobyqb.o
f95 -fpic -g -O2 -c update.f -o update.o
f95 -fpic -g -O2 -c updatebobyqa.f -o updatebobyqa.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o minqa.so altmov.o bigden.o biglag.o bobyqa.o bobyqb.o lagmax.o minqa.o newuoa.o newuob.o prelim.o rescue.o trsapp.o trsbox.o trstep.o uobyqa.o uobyqb.o update.o updatebobyqa.o -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ accepts -g... (cached) yes
checking for pkg-config... yes
configure: Now testing for NLopt header file.
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking nlopt.h usability... no
checking nlopt.h presence... no
checking for nlopt.h... no
configure: Need to download and build NLopt
configure: Starting to install library to /tmp/Rtmp6xrKK2/R.INSTALL68fa2cfa0dc6/nloptr/nlopt-2.4.2
configure: Done installing library to /tmp/Rtmp6xrKK2/R.INSTALL68fa2cfa0dc6/nloptr/nlopt-2.4.2
configure: creating ./config.status
config.status: creating src/Makevars
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dummy.cpp -o dummy.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -I/tmp/Rtmp6xrKK2/R.INSTALL68fa2cfa0dc6/nloptr/nlopt-2.4.2/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nloptr.c -o nloptr.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o nloptr.so dummy.o nloptr.o -lm /tmp/Rtmp6xrKK2/R.INSTALL68fa2cfa0dc6/nloptr/nlopt-2.4.2/lib/libnlopt_cxx.a -L/usr/local/lib/R/lib -lR
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppEigen.cpp -o RcppEigen.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastLm.cpp -o fastLm.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o init.o -L/usr/local/lib/R/lib -lRlapack -lblas -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for inline... inline
checking for C/C++ restrict keyword... __restrict
checking for size_t... yes
checking for ptrdiff_t... yes
checking for error_at_line... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking whether sys/types.h defines makedev... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for clock_gettime... yes
checking for gettimeofday... yes
checking for memmove... yes
checking for memset... yes
checking for pow... no
checking for select... yes
checking for sqrt... no
checking for gcc option to support OpenMP... -fopenmp
checking whether OpenMP will work in a package... yes
checking for mpi root directory...
checking mpi.h usability... no
checking mpi.h presence... no
checking for mpi.h... no
checking for libmpi.{a,so,dylib}... checking for main in -lmpi... no
checking for openpty in -lutil... yes
checking for main in -lpthread... yes
configure: creating ./config.status
config.status: creating src/Makevars
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.cpp -o init.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c siena07internals.cpp -o siena07internals.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c siena07models.cpp -o siena07models.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c siena07setup.cpp -o siena07setup.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c siena07utilities.cpp -o siena07utilities.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ChangingDyadicCovariate.cpp -o data/ChangingDyadicCovariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ConstantDyadicCovariate.cpp -o data/ConstantDyadicCovariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/OneModeNetworkLongitudinalData.cpp -o data/OneModeNetworkLongitudinalData.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/DyadicCovariateValueIterator.cpp -o data/DyadicCovariateValueIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/LongitudinalData.cpp -o data/LongitudinalData.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/NetworkLongitudinalData.cpp -o data/NetworkLongitudinalData.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ExogenousEvent.cpp -o data/ExogenousEvent.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/Covariate.cpp -o data/Covariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/DyadicCovariate.cpp -o data/DyadicCovariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/BehaviorLongitudinalData.cpp -o data/BehaviorLongitudinalData.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ChangingCovariate.cpp -o data/ChangingCovariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/Data.cpp -o data/Data.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/NetworkConstraint.cpp -o data/NetworkConstraint.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ActorSet.cpp -o data/ActorSet.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data/ConstantCovariate.cpp -o data/ConstantCovariate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/BehaviorChange.cpp -o model/ml/BehaviorChange.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/Chain.cpp -o model/ml/Chain.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/NetworkChange.cpp -o model/ml/NetworkChange.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/MiniStep.cpp -o model/ml/MiniStep.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/Option.cpp -o model/ml/Option.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/ml/MLSimulation.cpp -o model/ml/MLSimulation.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/variables/DiffusionEffectValueTable.cpp -o model/variables/DiffusionEffectValueTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/variables/EffectValueTable.cpp -o model/variables/EffectValueTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/variables/BehaviorVariable.cpp -o model/variables/BehaviorVariable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/variables/NetworkVariable.cpp -o model/variables/NetworkVariable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/variables/DependentVariable.cpp -o model/variables/DependentVariable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/EpochSimulation.cpp -o model/EpochSimulation.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutOutDegreeAssortativityEffect.cpp -o model/effects/OutOutDegreeAssortativityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/ReciprocatedSimilarityEffect.cpp -o model/effects/ReciprocatedSimilarityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AverageInAlterEffect.cpp -o model/effects/AverageInAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/NetworkEffect.cpp -o model/effects/NetworkEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/EffectFactory.cpp -o model/effects/EffectFactory.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DyadicCovariateDependentNetworkEffect.cpp -o model/effects/DyadicCovariateDependentNetworkEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InteractionCovariateEffect.cpp -o model/effects/InteractionCovariateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/ReciprocalDegreeBehaviorEffect.cpp -o model/effects/ReciprocalDegreeBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutdegreeActivityEffect.cpp -o model/effects/OutdegreeActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveTriadsEffect.cpp -o model/effects/TransitiveTriadsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/RecipdegreePopularityEffect.cpp -o model/effects/RecipdegreePopularityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SimilarityEffect.cpp -o model/effects/SimilarityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IsolateNetEffect.cpp -o model/effects/IsolateNetEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DenseTriadsBehaviorEffect.cpp -o model/effects/DenseTriadsBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AverageAlterInDist2Effect.cpp -o model/effects/AverageAlterInDist2Effect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AverageAlterEffect.cpp -o model/effects/AverageAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TruncatedOutdegreeEffect.cpp -o model/effects/TruncatedOutdegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TruncatedOutdegreeEffect2.cpp -o model/effects/TruncatedOutdegreeEffect2.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DyadicCovariateAndNetworkBehaviorEffect.cpp -o model/effects/DyadicCovariateAndNetworkBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutdegreeActivitySqrtEffect.cpp -o model/effects/OutdegreeActivitySqrtEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/LinearShapeEffect.cpp -o model/effects/LinearShapeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/Effect.cpp -o model/effects/Effect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InStructuralEquivalenceEffect.cpp -o model/effects/InStructuralEquivalenceEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IsolateEffect.cpp -o model/effects/IsolateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/HomCovariateActivityEffect.cpp -o model/effects/HomCovariateActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/NetworkDependentBehaviorEffect.cpp -o model/effects/NetworkDependentBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/BetweennessEffect.cpp -o model/effects/BetweennessEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/BothDegreesEffect.cpp -o model/effects/BothDegreesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateIndirectTiesEffect.cpp -o model/effects/CovariateIndirectTiesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/QuadraticShapeEffect.cpp -o model/effects/QuadraticShapeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/ThresholdShapeEffect.cpp -o model/effects/ThresholdShapeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SameCovariateActivityEffect.cpp -o model/effects/SameCovariateActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IndegreeEffect.cpp -o model/effects/IndegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersInDist2CovariateAverageEffect.cpp -o model/effects/AltersInDist2CovariateAverageEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AverageAlterDist2Effect.cpp -o model/effects/AverageAlterDist2Effect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DyadicCovariateAvAltEffect.cpp -o model/effects/DyadicCovariateAvAltEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/PopularityAlterEffect.cpp -o model/effects/PopularityAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/WXXClosureEffect.cpp -o model/effects/WXXClosureEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersCovariateAvSimEffect.cpp -o model/effects/AltersCovariateAvSimEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/XWXClosureEffect.cpp -o model/effects/XWXClosureEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IndegreePopularityEffect.cpp -o model/effects/IndegreePopularityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersCovariateAvAltEffect.cpp -o model/effects/AltersCovariateAvAltEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateDiffEgoEffect.cpp -o model/effects/CovariateDiffEgoEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InverseSquaredOutdegreeEffect.cpp -o model/effects/InverseSquaredOutdegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InverseOutdegreeEffect.cpp -o model/effects/InverseOutdegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateAndNetworkBehaviorEffect.cpp -o model/effects/CovariateAndNetworkBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateAlterEffect.cpp -o model/effects/CovariateAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SimilarityTransitiveTripletsEffect.cpp -o model/effects/SimilarityTransitiveTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SameCovariateTransitiveTripletsEffect.cpp -o model/effects/SameCovariateTransitiveTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AlterCovariateActivityEffect.cpp -o model/effects/AlterCovariateActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IndegreeActivityEffect.cpp -o model/effects/IndegreeActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/HomCovariateTransitiveTripletsEffect.cpp -o model/effects/HomCovariateTransitiveTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/HigherCovariateEffect.cpp -o model/effects/HigherCovariateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SimilarityWEffect.cpp -o model/effects/SimilarityWEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SameCovariateEffect.cpp -o model/effects/SameCovariateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersDist2CovariateAverageEffect.cpp -o model/effects/AltersDist2CovariateAverageEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DistanceTwoEffect.cpp -o model/effects/DistanceTwoEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DoubleInPopEffect.cpp -o model/effects/DoubleInPopEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DoubleRecDegreeBehaviorEffect.cpp -o model/effects/DoubleRecDegreeBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutdegreePopularityEffect.cpp -o model/effects/OutdegreePopularityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/ProductFunction.cpp -o model/effects/generic/ProductFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/InTieFunction.cpp -o model/effects/generic/InTieFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDegreeFunction.cpp -o model/effects/generic/CovariateDegreeFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateInStarFunction.cpp -o model/effects/generic/SameCovariateInStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/DifferentCovariateInStarFunction.cpp -o model/effects/generic/DifferentCovariateInStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/EqualCovariatePredicate.cpp -o model/effects/generic/EqualCovariatePredicate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/HomCovariateMixedTwoPathFunction.cpp -o model/effects/generic/HomCovariateMixedTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDistance2SimilarityNetworkFunction.cpp -o model/effects/generic/CovariateDistance2SimilarityNetworkFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateTwoPathFunction.cpp -o model/effects/generic/SameCovariateTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OutStarFunction.cpp -o model/effects/generic/OutStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/InDegreeFunction.cpp -o model/effects/generic/InDegreeFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/EgoInDegreeFunction.cpp -o model/effects/generic/EgoInDegreeFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OutTieFunction.cpp -o model/effects/generic/OutTieFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDistance2InAlterNetworkFunction.cpp -o model/effects/generic/CovariateDistance2InAlterNetworkFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/DifferenceFunction.cpp -o model/effects/generic/DifferenceFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MixedOutStarFunction.cpp -o model/effects/generic/MixedOutStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDistance2EgoAltSimNetworkFunction.cpp -o model/effects/generic/CovariateDistance2EgoAltSimNetworkFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateMixedNetworkAlterFunction.cpp -o model/effects/generic/CovariateMixedNetworkAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/InJaccardFunction.cpp -o model/effects/generic/InJaccardFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDistance2AlterNetworkFunction.cpp -o model/effects/generic/CovariateDistance2AlterNetworkFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OutActDistance2Function.cpp -o model/effects/generic/OutActDistance2Function.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/TwoPathFunction.cpp -o model/effects/generic/TwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/GenericNetworkEffect.cpp -o model/effects/generic/GenericNetworkEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MissingCovariatePredicate.cpp -o model/effects/generic/MissingCovariatePredicate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariatePredicate.cpp -o model/effects/generic/CovariatePredicate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/IntAlterFunction.cpp -o model/effects/generic/IntAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateInTiesFunction.cpp -o model/effects/generic/SameCovariateInTiesFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateOutTiesFunction.cpp -o model/effects/generic/SameCovariateOutTiesFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/BetweennessFunction.cpp -o model/effects/generic/BetweennessFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/EgoOutDegreeFunction.cpp -o model/effects/generic/EgoOutDegreeFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OutJaccardFunction.cpp -o model/effects/generic/OutJaccardFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateOutStarFunction.cpp -o model/effects/generic/SameCovariateOutStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/DifferentCovariateOutStarFunction.cpp -o model/effects/generic/DifferentCovariateOutStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SumFunction.cpp -o model/effects/generic/SumFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/EgoFunction.cpp -o model/effects/generic/EgoFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/ReciprocatedTwoPathFunction.cpp -o model/effects/generic/ReciprocatedTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/ConditionalFunction.cpp -o model/effects/generic/ConditionalFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MixedThreeCyclesFunction.cpp -o model/effects/generic/MixedThreeCyclesFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateDistance2NetworkFunction.cpp -o model/effects/generic/CovariateDistance2NetworkFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/AlterFunction.cpp -o model/effects/generic/AlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/IntSqrtFunction.cpp -o model/effects/generic/IntSqrtFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MixedNetworkAlterFunction.cpp -o model/effects/generic/MixedNetworkAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MixedInStarFunction.cpp -o model/effects/generic/MixedInStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OutDegreeFunction.cpp -o model/effects/generic/OutDegreeFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/SameCovariateMixedTwoPathFunction.cpp -o model/effects/generic/SameCovariateMixedTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/InStarsTimesDegreesFunction.cpp -o model/effects/generic/InStarsTimesDegreesFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/ConstantFunction.cpp -o model/effects/generic/ConstantFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/MixedTwoPathFunction.cpp -o model/effects/generic/MixedTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/ReverseTwoPathFunction.cpp -o model/effects/generic/ReverseTwoPathFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/AlterPredicate.cpp -o model/effects/generic/AlterPredicate.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/CovariateNetworkAlterFunction.cpp -o model/effects/generic/CovariateNetworkAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/GwespFunction.cpp -o model/effects/generic/GwespFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/NetworkAlterFunction.cpp -o model/effects/generic/NetworkAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/DoubleOutActFunction.cpp -o model/effects/generic/DoubleOutActFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/OneModeNetworkAlterFunction.cpp -o model/effects/generic/OneModeNetworkAlterFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/generic/InStarFunction.cpp -o model/effects/generic/InStarFunction.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveMediatedTripletsEffect.cpp -o model/effects/TransitiveMediatedTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveTiesEffect.cpp -o model/effects/TransitiveTiesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/ReciprocityEffect.cpp -o model/effects/ReciprocityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/MaxAlterEffect.cpp -o model/effects/MaxAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DenseTriadsSimilarityEffect.cpp -o model/effects/DenseTriadsSimilarityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/RecipdegreeActivityEffect.cpp -o model/effects/RecipdegreeActivityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveTripletsEffect.cpp -o model/effects/TransitiveTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutdegreeEffect.cpp -o model/effects/OutdegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateEgoSquaredEffect.cpp -o model/effects/CovariateEgoSquaredEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateDependentNetworkEffect.cpp -o model/effects/CovariateDependentNetworkEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/GwdspEffect.cpp -o model/effects/GwdspEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/WWXClosureEffect.cpp -o model/effects/WWXClosureEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateDependentBehaviorEffect.cpp -o model/effects/CovariateDependentBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/OutInDegreeAssortativityEffect.cpp -o model/effects/OutInDegreeAssortativityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DyadicCovariateReciprocityEffect.cpp -o model/effects/DyadicCovariateReciprocityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AntiIsolateEffect.cpp -o model/effects/AntiIsolateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/NetworkInteractionEffect.cpp -o model/effects/NetworkInteractionEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InInDegreeAssortativityEffect.cpp -o model/effects/InInDegreeAssortativityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersCovariateAverageEffect.cpp -o model/effects/AltersCovariateAverageEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DyadicCovariateMainEffect.cpp -o model/effects/DyadicCovariateMainEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/FourCyclesEffect.cpp -o model/effects/FourCyclesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/SameCovariateFourCyclesEffect.cpp -o model/effects/SameCovariateFourCyclesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateEgoAlterEffect.cpp -o model/effects/CovariateEgoAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InIsolateDegreeEffect.cpp -o model/effects/InIsolateDegreeEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/ThreeCyclesEffect.cpp -o model/effects/ThreeCyclesEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TwoNetworkDependentBehaviorEffect.cpp -o model/effects/TwoNetworkDependentBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/BalanceEffect.cpp -o model/effects/BalanceEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateEgoEffect.cpp -o model/effects/CovariateEgoEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateEgoDiffEffect.cpp -o model/effects/CovariateEgoDiffEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DenseTriadsEffect.cpp -o model/effects/DenseTriadsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/JumpCovariateTransitiveTripletsEffect.cpp -o model/effects/JumpCovariateTransitiveTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AverageReciprocatedAlterEffect.cpp -o model/effects/AverageReciprocatedAlterEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DoubleDegreeBehaviorEffect.cpp -o model/effects/DoubleDegreeBehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/StructuralRateEffect.cpp -o model/effects/StructuralRateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/BehaviorInteractionEffect.cpp -o model/effects/BehaviorInteractionEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveReciprocatedTriplets2Effect.cpp -o model/effects/TransitiveReciprocatedTriplets2Effect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateSimilarityEffect.cpp -o model/effects/CovariateSimilarityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InAltersCovariateAverageEffect.cpp -o model/effects/InAltersCovariateAverageEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/BehaviorEffect.cpp -o model/effects/BehaviorEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/MixedNetworkEffect.cpp -o model/effects/MixedNetworkEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/TransitiveReciprocatedTripletsEffect.cpp -o model/effects/TransitiveReciprocatedTripletsEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DiffusionRateEffect.cpp -o model/effects/DiffusionRateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/IsolatePopEffect.cpp -o model/effects/IsolatePopEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DensityEffect.cpp -o model/effects/DensityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/InOutDegreeAssortativityEffect.cpp -o model/effects/InOutDegreeAssortativityEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateContrastEffect.cpp -o model/effects/CovariateContrastEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/CovariateDiffEffect.cpp -o model/effects/CovariateDiffEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/DoubleOutActEffect.cpp -o model/effects/DoubleOutActEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/MainCovariateEffect.cpp -o model/effects/MainCovariateEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/effects/AltersCovariateTotSimEffect.cpp -o model/effects/AltersCovariateTotSimEffect.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/EffectInfo.cpp -o model/EffectInfo.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/State.cpp -o model/State.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/PermittedChangeFilter.cpp -o model/filters/PermittedChangeFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/LowerFilter.cpp -o model/filters/LowerFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/DisjointFilter.cpp -o model/filters/DisjointFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/NetworkDependentFilter.cpp -o model/filters/NetworkDependentFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/HigherFilter.cpp -o model/filters/HigherFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/filters/AtLeastOneFilter.cpp -o model/filters/AtLeastOneFilter.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/Function.cpp -o model/Function.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/Model.cpp -o model/Model.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/StatisticCalculator.cpp -o model/StatisticCalculator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/EgocentricConfigurationTable.cpp -o model/tables/EgocentricConfigurationTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/NetworkCache.cpp -o model/tables/NetworkCache.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/ConfigurationTable.cpp -o model/tables/ConfigurationTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/MixedConfigurationTable.cpp -o model/tables/MixedConfigurationTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/Cache.cpp -o model/tables/Cache.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/BetweennessTable.cpp -o model/tables/BetweennessTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/TwoPathTable.cpp -o model/tables/TwoPathTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/TwoNetworkCache.cpp -o model/tables/TwoNetworkCache.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/CriticalInStarTable.cpp -o model/tables/CriticalInStarTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/MixedTwoPathTable.cpp -o model/tables/MixedTwoPathTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/tables/MixedEgocentricConfigurationTable.cpp -o model/tables/MixedEgocentricConfigurationTable.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model/SimulationActorSet.cpp -o model/SimulationActorSet.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/NetworkUtils.cpp -o network/NetworkUtils.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/CommonNeighborIterator.cpp -o network/CommonNeighborIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/layers/DistanceTwoLayer.cpp -o network/layers/DistanceTwoLayer.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/Network.cpp -o network/Network.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/iterators/UnionTieIterator.cpp -o network/iterators/UnionTieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/iterators/CombinedTieIterator.cpp -o network/iterators/CombinedTieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/iterators/SymDiffTieIterator.cpp -o network/iterators/SymDiffTieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/iterators/IntersectionTieIterator.cpp -o network/iterators/IntersectionTieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/OneModeNetwork.cpp -o network/OneModeNetwork.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/IncidentTieIterator.cpp -o network/IncidentTieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c network/TieIterator.cpp -o network/TieIterator.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils/Utils.cpp -o utils/Utils.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils/NamedObject.cpp -o utils/NamedObject.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils/Random.cpp -o utils/Random.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I. -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils/SqrtTable.cpp -o utils/SqrtTable.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o RSiena.so init.o siena07internals.o siena07models.o siena07setup.o siena07utilities.o data/ChangingDyadicCovariate.o data/ConstantDyadicCovariate.o data/OneModeNetworkLongitudinalData.o data/DyadicCovariateValueIterator.o data/LongitudinalData.o data/NetworkLongitudinalData.o data/ExogenousEvent.o data/Covariate.o data/DyadicCovariate.o data/BehaviorLongitudinalData.o data/ChangingCovariate.o data/Data.o data/NetworkConstraint.o data/ActorSet.o data/ConstantCovariate.o model/ml/BehaviorChange.o model/ml/Chain.o model/ml/NetworkChange.o model/ml/MiniStep.o model/ml/Option.o model/ml/MLSimulation.o model/variables/DiffusionEffectValueTable.o model/variables/EffectValueTable.o model/variables/BehaviorVariable.o model/variables/NetworkVariable.o model/variables/DependentVariable.o model/EpochSimulation.o model/effects/OutOutDegreeAssortativityEffect.o model/effects/ReciprocatedSimilarityEffect.o model/effects/AverageInAlterEffect.o model/effects/NetworkEffect.o model/effects/EffectFactory.o model/effects/DyadicCovariateDependentNetworkEffect.o model/effects/InteractionCovariateEffect.o model/effects/ReciprocalDegreeBehaviorEffect.o model/effects/OutdegreeActivityEffect.o model/effects/TransitiveTriadsEffect.o model/effects/RecipdegreePopularityEffect.o model/effects/SimilarityEffect.o model/effects/IsolateNetEffect.o model/effects/DenseTriadsBehaviorEffect.o model/effects/AverageAlterInDist2Effect.o model/effects/AverageAlterEffect.o model/effects/TruncatedOutdegreeEffect.o model/effects/TruncatedOutdegreeEffect2.o model/effects/DyadicCovariateAndNetworkBehaviorEffect.o model/effects/OutdegreeActivitySqrtEffect.o model/effects/LinearShapeEffect.o model/effects/Effect.o model/effects/InStructuralEquivalenceEffect.o model/effects/IsolateEffect.o model/effects/HomCovariateActivityEffect.o model/effects/NetworkDependentBehaviorEffect.o model/effects/BetweennessEffect.o model/effects/BothDegreesEffect.o model/effects/CovariateIndirectTiesEffect.o model/effects/QuadraticShapeEffect.o model/effects/ThresholdShapeEffect.o model/effects/SameCovariateActivityEffect.o model/effects/IndegreeEffect.o model/effects/AltersInDist2CovariateAverageEffect.o model/effects/AverageAlterDist2Effect.o model/effects/DyadicCovariateAvAltEffect.o model/effects/PopularityAlterEffect.o model/effects/WXXClosureEffect.o model/effects/AltersCovariateAvSimEffect.o model/effects/XWXClosureEffect.o model/effects/IndegreePopularityEffect.o model/effects/AltersCovariateAvAltEffect.o model/effects/CovariateDiffEgoEffect.o model/effects/InverseSquaredOutdegreeEffect.o model/effects/InverseOutdegreeEffect.o model/effects/CovariateAndNetworkBehaviorEffect.o model/effects/CovariateAlterEffect.o model/effects/SimilarityTransitiveTripletsEffect.o model/effects/SameCovariateTransitiveTripletsEffect.o model/effects/AlterCovariateActivityEffect.o model/effects/IndegreeActivityEffect.o model/effects/HomCovariateTransitiveTripletsEffect.o model/effects/HigherCovariateEffect.o model/effects/SimilarityWEffect.o model/effects/SameCovariateEffect.o model/effects/AltersDist2CovariateAverageEffect.o model/effects/DistanceTwoEffect.o model/effects/DoubleInPopEffect.o model/effects/DoubleRecDegreeBehaviorEffect.o model/effects/OutdegreePopularityEffect.o model/effects/generic/ProductFunction.o model/effects/generic/InTieFunction.o model/effects/generic/CovariateDegreeFunction.o model/effects/generic/SameCovariateInStarFunction.o model/effects/generic/DifferentCovariateInStarFunction.o model/effects/generic/EqualCovariatePredicate.o model/effects/generic/HomCovariateMixedTwoPathFunction.o model/effects/generic/CovariateDistance2SimilarityNetworkFunction.o model/effects/generic/SameCovariateTwoPathFunction.o model/effects/generic/OutStarFunction.o model/effects/generic/InDegreeFunction.o model/effects/generic/EgoInDegreeFunction.o model/effects/generic/OutTieFunction.o model/effects/generic/CovariateDistance2InAlterNetworkFunction.o model/effects/generic/DifferenceFunction.o model/effects/generic/MixedOutStarFunction.o model/effects/generic/CovariateDistance2EgoAltSimNetworkFunction.o model/effects/generic/CovariateMixedNetworkAlterFunction.o model/effects/generic/InJaccardFunction.o model/effects/generic/CovariateDistance2AlterNetworkFunction.o model/effects/generic/OutActDistance2Function.o model/effects/generic/TwoPathFunction.o model/effects/generic/GenericNetworkEffect.o model/effects/generic/MissingCovariatePredicate.o model/effects/generic/CovariatePredicate.o model/effects/generic/IntAlterFunction.o model/effects/generic/SameCovariateInTiesFunction.o model/effects/generic/SameCovariateOutTiesFunction.o model/effects/generic/BetweennessFunction.o model/effects/generic/EgoOutDegreeFunction.o model/effects/generic/OutJaccardFunction.o model/effects/generic/SameCovariateOutStarFunction.o model/effects/generic/DifferentCovariateOutStarFunction.o model/effects/generic/SumFunction.o model/effects/generic/EgoFunction.o model/effects/generic/ReciprocatedTwoPathFunction.o model/effects/generic/ConditionalFunction.o model/effects/generic/MixedThreeCyclesFunction.o model/effects/generic/CovariateDistance2NetworkFunction.o model/effects/generic/AlterFunction.o model/effects/generic/IntSqrtFunction.o model/effects/generic/MixedNetworkAlterFunction.o model/effects/generic/MixedInStarFunction.o model/effects/generic/OutDegreeFunction.o model/effects/generic/SameCovariateMixedTwoPathFunction.o model/effects/generic/InStarsTimesDegreesFunction.o model/effects/generic/ConstantFunction.o model/effects/generic/MixedTwoPathFunction.o model/effects/generic/ReverseTwoPathFunction.o model/effects/generic/AlterPredicate.o model/effects/generic/CovariateNetworkAlterFunction.o model/effects/generic/GwespFunction.o model/effects/generic/NetworkAlterFunction.o model/effects/generic/DoubleOutActFunction.o model/effects/generic/OneModeNetworkAlterFunction.o model/effects/generic/InStarFunction.o model/effects/TransitiveMediatedTripletsEffect.o model/effects/TransitiveTiesEffect.o model/effects/ReciprocityEffect.o model/effects/MaxAlterEffect.o model/effects/DenseTriadsSimilarityEffect.o model/effects/RecipdegreeActivityEffect.o model/effects/TransitiveTripletsEffect.o model/effects/OutdegreeEffect.o model/effects/CovariateEgoSquaredEffect.o model/effects/CovariateDependentNetworkEffect.o model/effects/GwdspEffect.o model/effects/WWXClosureEffect.o model/effects/CovariateDependentBehaviorEffect.o model/effects/OutInDegreeAssortativityEffect.o model/effects/DyadicCovariateReciprocityEffect.o model/effects/AntiIsolateEffect.o model/effects/NetworkInteractionEffect.o model/effects/InInDegreeAssortativityEffect.o model/effects/AltersCovariateAverageEffect.o model/effects/DyadicCovariateMainEffect.o model/effects/FourCyclesEffect.o model/effects/SameCovariateFourCyclesEffect.o model/effects/CovariateEgoAlterEffect.o model/effects/InIsolateDegreeEffect.o model/effects/ThreeCyclesEffect.o model/effects/TwoNetworkDependentBehaviorEffect.o model/effects/BalanceEffect.o model/effects/CovariateEgoEffect.o model/effects/CovariateEgoDiffEffect.o model/effects/DenseTriadsEffect.o model/effects/JumpCovariateTransitiveTripletsEffect.o model/effects/AverageReciprocatedAlterEffect.o model/effects/DoubleDegreeBehaviorEffect.o model/effects/StructuralRateEffect.o model/effects/BehaviorInteractionEffect.o model/effects/TransitiveReciprocatedTriplets2Effect.o model/effects/CovariateSimilarityEffect.o model/effects/InAltersCovariateAverageEffect.o model/effects/BehaviorEffect.o model/effects/MixedNetworkEffect.o model/effects/TransitiveReciprocatedTripletsEffect.o model/effects/DiffusionRateEffect.o model/effects/IsolatePopEffect.o model/effects/DensityEffect.o model/effects/InOutDegreeAssortativityEffect.o model/effects/CovariateContrastEffect.o model/effects/CovariateDiffEffect.o model/effects/DoubleOutActEffect.o model/effects/MainCovariateEffect.o model/effects/AltersCovariateTotSimEffect.o model/EffectInfo.o model/State.o model/filters/PermittedChangeFilter.o model/filters/LowerFilter.o model/filters/DisjointFilter.o model/filters/NetworkDependentFilter.o model/filters/HigherFilter.o model/filters/AtLeastOneFilter.o model/Function.o model/Model.o model/StatisticCalculator.o model/tables/EgocentricConfigurationTable.o model/tables/NetworkCache.o model/tables/ConfigurationTable.o model/tables/MixedConfigurationTable.o model/tables/Cache.o model/tables/BetweennessTable.o model/tables/TwoPathTable.o model/tables/TwoNetworkCache.o model/tables/CriticalInStarTable.o model/tables/MixedTwoPathTable.o model/tables/MixedEgocentricConfigurationTable.o model/SimulationActorSet.o network/NetworkUtils.o network/CommonNeighborIterator.o network/layers/DistanceTwoLayer.o network/Network.o network/iterators/UnionTieIterator.o network/iterators/CombinedTieIterator.o network/iterators/SymDiffTieIterator.o network/iterators/IntersectionTieIterator.o network/OneModeNetwork.o network/IncidentTieIterator.o network/TieIterator.o utils/Utils.o utils/NamedObject.o utils/Random.o utils/SqrtTable.o -L/usr/local/lib/R/lib -lR
Warning in install.packages :
installation of package ‘RSiena’ had non-zero exit status
mkdir -p ../inst/lib/; \
cd tbb/src; \
if [ -n "" ]; then \
CONLY="gcc" CPLUS="g++" PIC_KEY="-fpic" WARNING_SUPPRESS="" make -e stdver=c++0x compiler=clang CXXFLAGS=-DTBB_NO_LEGACY=1 tbb_release tbbmalloc_release tbb_build_prefix=lib; \
elif [ -n "gcc" ]; then \
CONLY="gcc" CPLUS="g++" PIC_KEY="-fpic" WARNING_SUPPRESS="" make -e stdver=c++0x compiler=gcc CXXFLAGS=-DTBB_NO_LEGACY=1 tbb_release tbbmalloc_release tbb_build_prefix=lib; \
else \
CONLY="gcc" CPLUS="g++" PIC_KEY="-fpic" WARNING_SUPPRESS="" make -e stdver=c++0x CXXFLAGS=-DTBB_NO_LEGACY=1 tbb_release tbbmalloc_release tbb_build_prefix=lib; \
fi; \
cd ../..; \
cp tbb/build/lib_release/libtbb*.* ../inst/lib/
make[1]: Entering directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/src'
Created ../build/lib_release directory
make -e -C "../build/lib_release" -r -f ../../build/Makefile.tbb cfg=release
make[2]: Entering directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/build/lib_release'
g++ -o concurrent_hash_map.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/concurrent_hash_map.cpp
g++ -o concurrent_queue.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/concurrent_queue.cpp
g++ -o concurrent_vector.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/concurrent_vector.cpp
g++ -o dynamic_link.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/dynamic_link.cpp
g++ -o itt_notify.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/itt_notify.cpp
g++ -o cache_aligned_allocator.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/cache_aligned_allocator.cpp
g++ -o pipeline.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/pipeline.cpp
g++ -o queuing_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/queuing_mutex.cpp
g++ -o queuing_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/queuing_rw_mutex.cpp
g++ -o reader_writer_lock.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/reader_writer_lock.cpp
g++ -o spin_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/spin_rw_mutex.cpp
g++ -o x86_rtm_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/x86_rtm_rw_mutex.cpp
g++ -o spin_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/spin_mutex.cpp
g++ -o critical_section.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/critical_section.cpp
g++ -o mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/mutex.cpp
g++ -o recursive_mutex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/recursive_mutex.cpp
g++ -o condition_variable.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/condition_variable.cpp
g++ -o tbb_thread.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/tbb_thread.cpp
g++ -o concurrent_monitor.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/concurrent_monitor.cpp
g++ -o semaphore.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/semaphore.cpp
g++ -o private_server.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/private_server.cpp
g++ -o rml_tbb.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/rml/client/rml_tbb.cpp
sh ../../build/version_info_linux.sh g++ -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include -I. >version_string.ver
g++ -o tbb_misc.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include -I. ../../src/tbb/tbb_misc.cpp
g++ -o tbb_misc_ex.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/tbb_misc_ex.cpp
g++ -o task.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/task.cpp
g++ -o task_group_context.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/task_group_context.cpp
g++ -o governor.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/governor.cpp
g++ -o market.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/market.cpp
g++ -o arena.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/arena.cpp
g++ -o scheduler.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/scheduler.cpp
g++ -o observer_proxy.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/observer_proxy.cpp
g++ -o tbb_statistics.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/tbb_statistics.cpp
g++ -o tbb_main.o -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -std=c++0x -I../../src -I../../src/rml/include -I../../include ../../src/tbb/tbb_main.cpp
sh ../../build/generate_tbbvars.sh
echo "INPUT (libtbb.so.2)" > libtbb.so
g++ -E -x c++ ../../src/tbb/lin64-tbb-export.def -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -fpic -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -DTBB_NO_LEGACY=1 -I../../src -I../../src/rml/include -I../../include > tbb.def
g++ -fpic -o libtbb.so.2 concurrent_hash_map.o concurrent_queue.o concurrent_vector.o dynamic_link.o itt_notify.o cache_aligned_allocator.o pipeline.o queuing_mutex.o queuing_rw_mutex.o reader_writer_lock.o spin_rw_mutex.o x86_rtm_rw_mutex.o spin_mutex.o critical_section.o mutex.o recursive_mutex.o condition_variable.o tbb_thread.o concurrent_monitor.o semaphore.o private_server.o rml_tbb.o tbb_misc.o tbb_misc_ex.o task.o task_group_context.o governor.o market.o arena.o scheduler.o observer_proxy.o tbb_statistics.o tbb_main.o -ldl -lpthread -lrt -shared -Wl,-soname=libtbb.so.2 -m64 -Wl,--version-script,tbb.def
make[2]: Leaving directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/build/lib_release'
make -e -C "../build/lib_release" -r -f ../../build/Makefile.tbbmalloc cfg=release malloc
make[2]: Entering directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/build/lib_release'
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/backend.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/large_objects.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/backref.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/tbbmalloc.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -o itt_notify_malloc.o -I../../src -I../../src/rml/include -I../../include ../../src/tbb/itt_notify.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -fpic -flifetime-dse=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc -I. ../../src/tbbmalloc/frontend.cpp
echo "INPUT (libtbbmalloc.so.2)" > libtbbmalloc.so
g++ -E -x c++ ../../src/tbbmalloc/lin64-tbbmalloc-export.def -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -DTBB_NO_LEGACY=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -I../../src -I../../src/rml/include -I../../include > tbbmalloc.def
gcc -fpic -o libtbbmalloc.so.2 backend.o large_objects.o backref.o tbbmalloc.o itt_notify_malloc.o frontend.o -ldl -lpthread -lrt -shared -Wl,-soname=libtbbmalloc.so.2 -m64 -Wl,--version-script,tbbmalloc.def
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -DTBB_NO_LEGACY=1 -fpic -flifetime-dse=1 -D__TBBMALLOC_BUILD=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/proxy.cpp
g++ -c -MMD -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -DTBB_NO_LEGACY=1 -fpic -flifetime-dse=1 -D__TBBMALLOC_BUILD=1 -I../../src -I../../src/rml/include -I../../include -I../../src/tbbmalloc -I../../src/tbbmalloc ../../src/tbbmalloc/tbb_function_replacement.cpp
echo "INPUT (libtbbmalloc_proxy.so.2)" > libtbbmalloc_proxy.so
g++ -E -x c++ ../../src/tbbmalloc/lin64-proxy-export.def -DDO_ITT_NOTIFY -g -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -DTBB_NO_LEGACY=1 -I../../src -I../../src/rml/include -I../../include > tbbmallocproxy.def
g++ -fpic -o libtbbmalloc_proxy.so.2 proxy.o tbb_function_replacement.o -ldl -lpthread -lrt libtbbmalloc.so -shared -Wl,-soname=libtbbmalloc_proxy.so.2 -m64 -Wl,--version-script,tbbmallocproxy.def
make[2]: Leaving directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/build/lib_release'
make[1]: Leaving directory '/tmp/RtmpvTAh5t/R.INSTALLa394997c44f/RcppParallel/src/tbb/src'
g++ -I"/usr/local/lib/R/include" -DNDEBUG -std=gnu++11 -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -I"/usr/local/lib/R/site-library/BH/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.cpp -o init.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -std=gnu++11 -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -I"/usr/local/lib/R/site-library/BH/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c options.cpp -o options.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o RcppParallel.so init.o options.o -L/usr/local/lib/R/lib -lR
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ accepts -g... (cached) yes
checking whether g++ version is sufficient... yes, with OpenMP as version 6.3.0
checking for macOS... checking LAPACK_LIBS... R-supplied partial LAPACK found
checking for OpenMP... found and suitable
configure: creating ./config.status
config.status: creating inst/include/RcppArmadilloConfigGenerated.h
config.status: creating src/Makevars
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fopenmp -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppArmadillo.cpp -o RcppArmadillo.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fopenmp -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -I../inst/include -fopenmp -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastLm.cpp -o fastLm.o
g++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o RcppArmadillo.so RcppArmadillo.o RcppExports.o fastLm.o -fopenmp -L/usr/local/lib/R/lib -lRlapack -lblas -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data2hill.c -o data2hill.o
f95 -fpic -g -O2 -c decorana.f -o decorana.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c getF.c -o getF.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c goffactor.c -o goffactor.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
f95 -fpic -g -O2 -c monoMDS.f -o monoMDS.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nestedness.c -o nestedness.o
f95 -fpic -g -O2 -c ordering.f -o ordering.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnpoly.c -o pnpoly.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stepacross.c -o stepacross.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c vegdist.c -o vegdist.o
gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o vegan.so data2hill.o decorana.o getF.o goffactor.o init.o monoMDS.o nestedness.o ordering.o pnpoly.o stepacross.o vegdist.o -L/usr/local/lib/R/lib -lRlapack -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c external.cpp -o external.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmFamily.cpp -o glmFamily.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mcmcsamp.cpp -o mcmcsamp.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optimizer.cpp -o optimizer.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c predModule.cpp -o predModule.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppEigen/include" -I/usr/local/include -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c respModule.cpp -o respModule.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o lme4.so external.o glmFamily.o mcmcsamp.o optimizer.o predModule.o respModule.o -L/usr/local/lib/R/lib -lR
Warning in install.packages :
installation of package ‘btergm’ had non-zero exit status
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tnam.cpp -o tnam.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o tnam.so RcppExports.o tnam.o -L/usr/local/lib/R/lib -lR
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Corr_to_Part.cpp -o Corr_to_Part.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Extended_Metropolis_Hastings_Sampler.cpp -o Extended_Metropolis_Hastings_Sampler.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Metropolis_Hastings_Sampler.cpp -o Metropolis_Hastings_Sampler.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c frobenius_norm.cpp -o frobenius_norm.o
g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/RcppArmadillo/include" -I"/usr/local/lib/R/site-library/RcppParallel/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c weighted_mple_objective.cpp -o weighted_mple_objective.o
g++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o GERGM.so Corr_to_Part.o Extended_Metropolis_Hastings_Sampler.o Metropolis_Hastings_Sampler.o RcppExports.o frobenius_norm.o weighted_mple_objective.o -L/usr/local/lib/R/lib -lRlapack -lblas -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lR
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
gcc -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rem.cpp -o rem.o
g++ -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c temp.cpp -o temp.o
g++ -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o rem.so RcppExports.o registerDynamicSymbol.o rem.o temp.o -L/usr/local/lib/R/lib -lR
Warning in install.packages :
installation of package ‘xergm’ had non-zero exit status
Any idea where to hunt to figure out the problem?
installing xergm using R version 4.0
I am having trouble installing xergm on RStudio. Using RSwitch, I tried reverting to an older version of R (trying versions 3.3.3 and 3.6.3) and the install still did not work. I assume there is a problem with CRAN.
install.packages("xergm")
Warning in install.packages :
package ‘xergm’ is not available (for R version 4.0.0)
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