lemonjust Goto Github PK

3d-unet

A pytorch implementation of 3D UNet for 3D MRI Segmentation.

3dcellseg

Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (However, I think the title should be "3DCellSeg - a robust deep learning-based 3D cell instance segmentation pipeline".)

acsn_v1.5

advanced-deep-learning-and-reinforcement-learning-deepmind

🎮 Advanced Deep Learning and Reinforcement Learning at UCL & DeepMind | YouTube videos 👉

birl

BIRL: Benchmark on Image Registration methods with Landmark validations

bisc577

building-data-science-applications-with-fastapi

Building Data Science Applications with FastAPI, Published by Packt

cellpose

a generalist algorithm for cellular segmentation

cellpose3d

3D Extension of the Cellpose Algorithm by Stringer et al., 2021.

cookiecutter-pypackage

Cookiecutter template for a Python package.

coscmos

cosCMOS ( "correct sCMOS", pronounced as cosmos ) is a Python package designed to cancel the fixed-pattern noise of sCMOS cameras.

deep-learning-project-template

Pytorch Lightning code guideline for conferences

deeplift

Public facing deeplift repo

demo_box

a central place for demos and code snippets of how to use some third-party tools

docs

TensorFlow documentation

dognet

A Deep Architecture for Synapse Detection in Multiplexed Fluorescence Images

fear-review

This is a collection of chaotic notes and references to everything about fear memory formation and corresponding synaptic changes, with some focus on zebrafish.

fieldtrip

The MATLAB toolbox for MEG and EEG analysis

inhipy

Python Utils for Inhibitory Synapses and Threat Circuit Analysis

keras-unet-collection

The Tensorflow, Keras implementation of U-net, V-net, U-net++, UNET 3+, Attention U-net, R2U-net, ResUnet-a, U^2-Net, and TransUNET with optional ImageNet-trained backbones.

magicgui

build GUIs from python functions, using magic.

matlab

Some useful matlab scripts.

mesa

Mesa is an agent-based modeling framework in Python

mingpt_pytorchexamples

A minimal PyTorch re-implementation of the OpenAI GPT (Generative Pretrained Transformer) training

mnist-pytorch_pytorchexamples

PyTorch implementation for training a LeNet-5 like Convnet on MNIST digits

models

Models and examples built with TensorFlow

mycelite

Mycelite is a SQLite extension that allows you to synchronize changes from one instance of SQLite to another.

napari-points-with-features

napari-u01

napari-vodex