liangdp1984 Goto Github PK
Name: dapeng Liang
Type: User
Bio: Cancer cell biology
Location: Dalian Medical University DaLian China
Name: dapeng Liang
Type: User
Bio: Cancer cell biology
Location: Dalian Medical University DaLian China
Code related to the 2023 AC-ICAM manuscript in Nature Medicine.
Microarray analysis of agilent data
Absolute Inference of Patient Signatures
A list of alternative splicing analysis resources
R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al. (https://doi.org/10.1038/s41467-020-14286-0)
Tiny python script to generate MAF files from output generated by standard annotation programs
A survey on identification and quantification of alternative polyadenylation sites from RNA-seq data
decorate a plot with associated information
Basic workflow for ATAC-seq analysis
ATAC-seq peak-calling, QC and differential analysis pipeline
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
A list of bioinformatic tools for working with Ribo-Seq data
tools and notes for spatial omics
A benchmark of batch-effect correction methods for single-cell RNA sequencing data
The MBatch R package and Docker image are designed to help assess and correct for batch effects.
Automated differential expression analysis for Illumina beadarrays (HT12 V4 arrays).
An R package to interpret biological trends from DNA methylation data
Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.
Pseudotime Analysis for Bulk Data
This is a pipeline for calculating weights for TWAS
A continually expanding collection of cancer genomics notes and data
CASTIN: CAncer-STromal INteractome analysis
R scripts for bioRxiv submission
mutation(barcode) caller for 10x single cell data
CDSeq R Package
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.