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echarts

Enterprise Charts 【Baidu Hi : 1379172 | Email : [email protected]】

every-programmer-should-know

A collection of (mostly) technical things every software developer should know

exomepipe

g4analysis

gatk

The process of GATK

getzlab-signatureanalyzer

Updated SignatureAnalyzer-GPU with mutational spectra & RNA expression compatibility.

ggbiplot

A biplot based on ggplot2 to upload into bioconda for a statble version

gridss

GRIDSS: the Genomic Rearrangement IDentification Software Suite

idea

Interactive Differential Expression Analyzer

interactivevenny

likelet.github.io

lab site

likelet.github.io_deprecated

http://seqworld.com

lncpipe

A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets

lncpipetestdata

A test data repo for LncPipe

lohhlaenvfastbuild

Build LOHHLA run env with a simple script

maftools

Summarize, Analyze and Visualize MAF files from TCGA or in house studies.

megahit

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

meripseqpipe

MeRIPseqPipe：An integrated analysis pipeline for MeRIP-seq data based on Nextflow.

meskit

methylkit

R package for DNA methylation analysis

methylumi

mirnaanalysis

A collection of miRna Analysis pipes

mptevol

A practical computational framework for comprehensively exploring the MPT from multiregional sequencing (MRS) experiments.

nf-co.re

Files for the main nf-core website >>>

nf-gatk_exome_preprocess

Adapted from the GATK best practice guide to preprocess whole exome sequencing (WES) data

ngi-chipseq

Nextflow ChIP-seq data analysis pipeline, National Genomics Infrastructure, Science for Life Laboratory in Stockholm

ny-shao.utilities

Utilities for myself

oviz-bio-demo

Documents of Oviz-Bio, a Platform for Bioinformatics Visualization

pcaonline

pcgr

Personal Cancer Genome Reporter (PCGR)