Giter VIP home page Giter VIP logo

laura's Introduction

laura: Local Auto-Regressive Average

This repository contains the source code for the Local AUto-Regressive Average (LAURA) inverse solution as described by de Peralta Menendez et al. (2001, 2004). The code is based on mne-python, a powerful EEG library for python.

Personally, I think this linear inverse solution finds the neural sources underlying M/EEG measurements with great success and is a valuable option among other inverse solutions such as minimum norm estimates and (e)LORETA.

Dependencies

That's it!

Installation from PyPi

Use pip to install laura and all its dependencies from PyPi:

pip install laura

Quick Start

The following code demonstrates how to use this package:

from laura import compute_laura

stc = compute_laura(evoked, forward)
stc.plot()

, where evoked is an instance of mne.Evoked and forward is an instance of mne.Forward. For further explanation on mne and its objects please refer to the mne website.

For a more comprehensive tutorial hop over to this notebook!

Feedback

Please leave your feedback and bug reports at [email protected].


References

Please cite the authors of the LAURA inverse solution appropriately:

[1] Menendez, R. G. D. P., Andino, S. G., Lantz, G., Michel, C. M., & Landis, T. (2001). Noninvasive localization of electromagnetic epileptic activity. I. Method descriptions and simulations. Brain topography, 14(2), 131-137.

[2] de Peralta Menendez, R. G., Murray, M. M., Michel, C. M., Martuzzi, R., & Andino, S. L. G. (2004). Electrical neuroimaging based on biophysical constraints. Neuroimage, 21(2), 527-539.


I would be happy if you would cite this package, too:

LAURA was calculated using the laura python package available at https://github.com/LukeTheHecker/laura.

Limitations

The current implementation is limited to:

  • fixed dipole orientations
  • time-domain EEG data

Feel free to modify the code and start a pull request!

Troubleshooting

laura's People

Contributors

lukethehecker avatar

Stargazers

 avatar  avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.