martinjvickers Goto Github PK
Name: Martin Vickers
Type: User
Company: John Innes Centre
Bio: Senior Scientist and former SysAdmin
Location: Norwich
Name: Martin Vickers
Type: User
Company: John Innes Centre
Bio: Senior Scientist and former SysAdmin
Location: Norwich
Read a 16bit 31channel 3dsimTIFF image
A complete web platform for visualizing and disseminating time series data
Alignment-Free Sequence Comparison
Biodiversity Genomics Academy 2023: Gene prediction with BRAKER3
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Simple data "munges" to get certain things done.
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
Messing around with cloudpool
Bioinformatics containers
CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search
Implementation of Xiao., Y. 2014. A novel significance score for gene selection and ranking.
Perl Script to convert CUFFDIFF output for use with edgeR and Trinity DE analysis
This is a backup of https://code.google.com/archive/p/d2-tools/
Some Datastructures for solving problems when working with very large GFF files.
A program to comprehensively compare several BAM files
DISMISS is an R script, which as an additional step in MeDIP-Seq data analysis workflow, enables the allocation of strands to methylated DNA regions. It does this by analyzing the proportions of first mate reads aligning to the methylated locus from the plus and minus strands.
Docker Image for the Lachesis Hi-C Scaffolder
Mirror of Daniel Zilberman Lab's bioinformatics tools
Ansible script for provisining expVIP
A program to quickly search the first read header of a fastq file to match an instrument ID and a run number
Trim a fastq or fastq.gz file to a fixed length
Worldwide building footprints derived from satellite imagery
forf from HMMlib at http://www.cs.au.dk/~asand/?page_id=152
My Various scripts for home monitoring
Once a SysAdmin, always a SysAdmin. Scripts for installing software
A fast multi-threaded k-mer counter
Perform Alignment-free k-tuple frequency comparisons from sequences. This can be in the form of two input files (e.g. a reference and a query) or a single file for pairwise comparisons to be made.
docker image for kast
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.