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Mayo Radiology Informatics Lab Demo

Workflow is an important component of the Quantative Imaging Network(QIN). For the face-to-face meeting in April 2017, this demonstration project will show the utility of grunt and TACTIC to store, process and orchestrate workflow. Using Docker and Docker Compose, a "cluster" of machines is created containing a DICOM ingestion system, TACTIC, Consul, and several grunt-enabled processing algorithms.

Start up

docker-compose up

Tutorial

To execute the tutorial follow the steps:

Start up the infrastructure described in the yml file of docker compose. The services that have been implemented in this demo are:

  • Tactic (CMS)(port: 9907)
  • Dicom receiver (dcmtk)(port: 9902)
  • Slicer (port: 9904)
  • riipl (port: 9901)
  • dcmqi (port: 9905)
  • Python machine learning (port: 9908)

send data.

We choose to use dcm4che (DCMTK although it was used as a receiver could not handle the DCO object)

./dcmsnd receiver@localhost:9902 {folder or file}

Tactic

Tactic has been preconfigured with the triggers used for the QIN demo.

To access Tactic visit 0.0.0.0:9907

User: admin

Password: admin

Extra Information

https://docs.google.com/presentation/d/1SBiw6VlwhgZorq9ahHbf4ZfTi_JvyZnz4oDjOJy0qN4/edit?usp=sharing

Acknowledgement

Supported by the NCI Grant CA160045

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