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License: Apache License 2.0
Code for "Identification of the Mode of Evolution in Incomplete Carbonate Successions"
License: Apache License 2.0
Preservation of stasis, Brownian motion, and weak & strong Brownian drift at different distances from shore in scenario A and B. See supplementary materials folder in onedrive for captions
Make figure showing variable effects of strat. architectures on preservation of modes. Use scenario A, 6 km offshore
Make a fists sketch of the figure with stratigraphic completeness and hiatus duration vs. basin position.
Make one plot for each scenario, name it scenarioX_strat_info.pdf
The plot should contain:
Add dashed line to figures 4,5,and 6 at AIC = 0.9 to indicate good model fit
Rewrite section "Carbonate Platform B" in results section after adjustment of sea level curve.
Start sketching the author contribution statement in the manuscript. Have a look at https://www.elsevier.com/authors/policies-and-guidelines/credit-author-statement and the guidelines by the journal: https://www.biomedcentral.com/getpublished/editorial-policies#authorship
Implement functions get_AIC_scenario, get_AIC_time, and get_AIC_no_of_sampl_loc in code/make_plots.R
Make figure displaying spatial variability in preservation. Use strong Brownian drift in scenario A
renv::restore()
tries to compile Matrix from sources, but crashes. Attached the log - as much as I could capture from the termninal. This follows the step where you agree to install missing packages. R 4.3.1
It is resolved by changing the version to 1.6-5
in renv.lock
but I am yet to check if that breaks anything down because of other packages that won't load either
CarbonateStratPalEvo/code/visualize_data.R
Lines 4 to 6 in 93bd104
CarbonateStratPalEvo/code/make_plots.R
Lines 11 to 13 in 93bd104
This cannot work because the data
folder is empty
Figure should compare preservation of strong Brownian drift 2 km offshore in scenario A (left) vs 6 km offshore in scenario B (right). Both locations have comparable completeness, but scenario A has longer gaps
renv.lock
requires fs 1.6.2 and R attempts to compile it from source and fails, but changing the required version of fs to 1.6.4 resolves the problem
Make a figure with 2 rows (one for each scenario) and 5 rows (one for each distance from shore)
Each subfigure is a histogram of the time elapsed between successive samples taken in the stratigraphic domain. The y axis is number (dimensionless), the x axis is time difference (myr). Make sure the x axis limits are the same for each subplot and start at 0
When ms is in final stage
As figure 6, but for the tests that cover the time interval of scenario B
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