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followers: 32.0 following: 16.0 repos: 124.0 gists: 1.0

Name: Mark E. Madsen

Type: User

Company: University of Washington

Mark E. Madsen's Projects

rmarkdown-template

Example template for an R package with R markdown paper which compiles to elsarticle latex article cleanly, using vanilla TexLive installation and Pandoc. Adapted and fixed from cboettig's lab notebook.

roam-css-system

Roam CSS System 2.0

roam-to-git

Automatic RoamResearch backup to Git

rocker

R configurations for Docker

rq

Simple job queues for Python

rvest

Simple web scraping for R

s3_website

Manage an S3 website: sync, deliver via CloudFront, benefit from advanced S3 website features.

s3plz

A polite, minimal interface for sending python objects to and from Amazon S3.

saa2012

Analysis and raw data for Safi CT symposium paper (Arxiv.org:1204.2043)

saa2015-open-methods

Presentation for Marwick/Lake/Bevan symposium: "m Open Methods in Archaeology: How to Encourage Reproducible Research as the Default Practice"

saa2015-open-methods-1

Materials relating to the SAA2015 session on Open Methods in Archaeology

saa2016-multiple-seriation-algorithms

Paper for an electronic symposium at the 2016 Society for American Archaeology conference, Orlando FL

scholar.py

A parser for Google Scholar, written in Python

scikit-learn

scikit-learn: machine learning in Python

seriation-combinatorics

Working paper on the combinatorial issues involved in deterministic frequency seriation

seriation-datasets

Datasets for frequency, occurrence, and continuity seriation methods

seriation-graph-state-space

Analyses of state space issues with seriations and seriation graphs

seriationct

Multiscale simulation of cultural transmission in a regional metapopulation, measured via seriation

sklearn-mmadsen

Additional classes and tools for ML and statistics built on top of scikit-learn, numpy, scipy, and various DNN libraries

skll

SciKit-Learn Laboratory (SKLL) makes it easy to run machine learning experiments.

slatkin-exact-tools

Command line tools and Python module for Montgomery Slatkin's "Exact" test of neutrality in a set of gene or trait counts

smart_open

Utils for streaming large files (S3, HDFS, gzip, bz2...)

storm

Distributed and fault-tolerant realtime computation: stream processing, continuous computation, distributed RPC, and more

sublimeknitr

Plugin that adds knitr Markdown and LaTeX support in Sublime Text 2 and 3

temporalnetworks

An Open Source library for the analysis and visualization of dynamic network structures, so-called temporal or time-varying networks.

textract

extract text from any document. no muss. no fuss.

the-art-of-linear-algebra

Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"

time-series-classification-and-clustering

Time series classification and clustering code written in Python. Mostly based on the work of Dr. Eamonn Keogh at University of California Riverside

transmissionframework

Framework library for creating flexible cultural transmission simulations

transmissionlab

Agent-based simulation framework for computational modeling of cultural transmission processes

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Mark E. Madsen's Projects

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