Light

Davi Marcon photo

mxrcon Goto Github PK

followers: 58.0 following: 188.0 repos: 91.0 gists: 3.0

Name: Davi Marcon

Type: User

Company: UFPA - Universidade Federal do Pará

Bio: Masters student at PPGBPA - UEPA/IEC working with whole genome sequencing of drug resistant tuberculosis

Twitter: mxrcon_

Location: Belém, PA

Blog: mxrcon.github.io

Hi, I'm Davi 🧑🏻‍🎓.

@@Biotechnologist and Bioinformatician@@
+ Living in Ananindeua, Brazil 🇧🇷.
+ Masters student at PPGBPA - UEPA/IEC
- 21 years old
! Programmer focused on Bioinformatics tools and pipelines
# Main Focus: Bash, Powershell, Linux,HPC, Nextflow, Python and Bioinformatics

About me

My name is Davi Marcon, my main interests are: Bioinformatics specially focused on bacterial resistance genes prediction, Metagenomics for interest genes discovery and everything related to bacteriology 🔬, I also a terminal ui fan.

Academic info

I'm a Biotechnologist graduated at UFPA - Federal University of Pará (Pará, Brazil). Currently working at Instituto Evandro Chagas with academic guidance of Phd. Karla Valéria Lima, more information here

Experience with:

NGS data processing, Microbial Genomic Assembly, Metagenomics using 16s rRNA, microbial antibiotic resistance and Phylogenetic inference.

Programming Languages:

Currently I'm using Python with Biopython package focusing on scripting, I'm also learning how to implement pipelines on Nextflow.

My tools for the moment:

My stats

⭐ Starred loro-dev/loro-prosemirror
⭐ Starred MVesuviusC/primerTree
⭐ Starred HeyPuter/puter
⭐ Starred zenodotus280/apl-md
⭐ Starred MW55/Natrix

Last Updated: Saturday, June 29th, 2024, 8:09:23 AM

Other stuff:

On my free time i solve Katas at Codewars using Python

Davi Marcon's Projects

gaas

Genome Assembly and Annotation Service code

githubgraduation-2022

Join the GitHub Graduation Yearbook and "walk the stage" on June 11.

gustavo_protein_anotation_nf

a simple pipeline to help gustavo finding new proteins using prokka and a python script

helloword-nextflow

a simple project trying to run all Hello words from different languages using nextflow

instrain

Bioinformatics program inStrain

latex-snippets-st

Custom LaTeX snippets for use in Sublime Text.

level-up-your-notes-with-org

Start getting compliments on your notes!

licenses

Licenses approved by Team Digitale, ready to use in your repository

mantis

A package to annotate protein sequences

metagem

An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

mg-evaluation

modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

monografiacbccufpa

Modelo em LaTeX de Monografia do Bacharelado em Ciência da Computação da Universidade Federal do Pará

mpgap

Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads

mtb_mono_inh_nf

multiomics-configs

Set of config files for species, taxonomies, etc

mxrcon

mxrcon.github.io

My personal site

ncbi_genomes_update

Script to sync ncbi genomes to a local directory

nextflow-gotchas

A collection of unexpected challenges and learnings with nextflow and nf-core.

nextflow-hello

Classic hello world script in Nextflow language

nextflow-idioms

Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.

nextflow-mode

Emacs major mode for Nextflow

nextflow-module-pattern

nextflow-study

A repository to mantain my own study sessions of nextflow

nextflow-vim

Nextflow plugin for VIM

nf-phdcourse20

Nextflow training material for CRG PhD course 2020

nf-snippets

my simple nf snippets

nf-tower-docs

Nextflow Tower Documentation

oneliners

Useful bash one-liners for bioinformatics.

1
2
3
4

Recommend Projects

React

A declarative, efficient, and flexible JavaScript library for building user interfaces.
Vue.js

🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript

TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
TensorFlow

An Open Source Machine Learning Framework for Everyone
Django

The Web framework for perfectionists with deadlines.
Laravel

A PHP framework for web artisans
D3

Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

javascript

JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
web

Some thing interesting about web. New door for the world.
server

A server is a program made to process requests and deliver data to clients.
Machine learning

Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Visualization

Some thing interesting about visualization, use data art
Game

Some thing interesting about game, make everyone happy.

Recommend Org

Facebook

We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft

Open source projects and samples from Microsoft.
Google

Google ❤️ Open Source for everyone.
Alibaba

Alibaba Open Source for everyone
D3

Data-Driven Documents codes.
Tencent

China tencent open source team.