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We well know GANs for success in the realistic image generation. However, they can be applied in tabular data generation. We will review and examine some recent papers about tabular GANs in action.

Home Page: https://towardsdatascience.com/review-of-gans-for-tabular-data-a30a2199342

License: Apache License 2.0

Python 100.00%

tabular-data-generation's Introduction

CodeFactor Code style: black License Downloads

GANs and TimeGANs, Diffusions, LLM for tabular data generation

Generative Networks are well-known for their success in realistic image generation. However, they can also be applied to generate tabular data. Here will give opportunity to try some of them.

How to use library

  • Installation: pip install tabgan
  • To generate new data to train by sampling and then filtering by adversarial training call GANGenerator().generate_data_pipe:
from tabgan.sampler import OriginalGenerator, GANGenerator, ForestDiffusionGenerator, LLMGenerator
import pandas as pd
import numpy as np


# random input data
train = pd.DataFrame(np.random.randint(-10, 150, size=(150, 4)), columns=list("ABCD"))
target = pd.DataFrame(np.random.randint(0, 2, size=(150, 1)), columns=list("Y"))
test = pd.DataFrame(np.random.randint(0, 100, size=(100, 4)), columns=list("ABCD"))

# generate data
new_train1, new_target1 = OriginalGenerator().generate_data_pipe(train, target, test, )
new_train2, new_target2 = GANGenerator(gen_params={"batch_size": 500, "epochs": 10, "patience": 5 }).generate_data_pipe(train, target, test, )
new_train3, new_target3 = ForestDiffusionGenerator().generate_data_pipe(train, target, test, )
new_train4, new_target4 = LLMGenerator(gen_params={"batch_size": 32, 
                                                          "epochs": 4, "llm": "distilgpt2", "max_length": 500}).generate_data_pipe(train, target, test, )

# example with all params defined
new_train4, new_target4 = GANGenerator(gen_x_times=1.1, cat_cols=None,
           bot_filter_quantile=0.001, top_filter_quantile=0.999, is_post_process=True,
           adversarial_model_params={
               "metrics": "AUC", "max_depth": 2, "max_bin": 100, 
               "learning_rate": 0.02, "random_state": 42, "n_estimators": 100,
           }, pregeneration_frac=2, only_generated_data=False,
           gen_params = {"batch_size": 500, "patience": 25, "epochs" : 500,}).generate_data_pipe(train, target,
                                          test, deep_copy=True, only_adversarial=False, use_adversarial=True)

All samplers OriginalGenerator, ForestDiffusionGenerator, LLMGenerator and GANGenerator have same input parameters.

  1. GANGenerator based on CTGAN
  2. ForestDiffusionGenerator based on Forest Diffusion (Tabular Diffusion and Flow-Matching)
  3. LLMGenerator based on Language Models are Realistic Tabular Data Generators (GReaT framework)
  • gen_x_times: float = 1.1 - how much data to generate, output might be less because of postprocessing and adversarial filtering
  • cat_cols: list = None - categorical columns
  • bot_filter_quantile: float = 0.001 - bottom quantile for postprocess filtering
  • top_filter_quantile: float = 0.999 - top quantile for postprocess filtering
  • is_post_process: bool = True - perform or not post-filtering, if false bot_filter_quantile and top_filter_quantile ignored
  • adversarial_model_params: dict params for adversarial filtering model, default values for binary task
  • pregeneration_frac: float = 2 - for generation step gen_x_times * pregeneration_frac amount of data will generated. However in postprocessing (1 + gen_x_times) % of original data will be returned
  • gen_params: dict params for GAN training

For generate_data_pipe methods params:

  • train_df: pd.DataFrame Train dataframe which has separate target
  • target: pd.DataFrame Input target for the train dataset
  • test_df: pd.DataFrame Test dataframe - newly generated train dataframe should be close to it
  • deep_copy: bool = True - make copy of input files or not. If not input dataframes will be overridden
  • only_adversarial: bool = False - only adversarial filtering to train dataframe will be performed
  • use_adversarial: bool = True - perform or not adversarial filtering
  • only_generated_data: bool = False - After generation get only newly generated, without concatenating input train dataframe.
  • @return: -> Tuple[pd.DataFrame, pd.DataFrame] - Newly generated train dataframe and test data

Thus, you may use this library to improve your dataset quality:

def fit_predict(clf, X_train, y_train, X_test, y_test):
    clf.fit(X_train, y_train)
    return sklearn.metrics.roc_auc_score(y_test, clf.predict_proba(X_test)[:, 1])



dataset = sklearn.datasets.load_breast_cancer()
clf = sklearn.ensemble.RandomForestClassifier(n_estimators=25, max_depth=6)
X_train, X_test, y_train, y_test = sklearn.model_selection.train_test_split(
    pd.DataFrame(dataset.data), pd.DataFrame(dataset.target, columns=["target"]), test_size=0.33, random_state=42)
print("initial metric", fit_predict(clf, X_train, y_train, X_test, y_test))

new_train1, new_target1 = OriginalGenerator().generate_data_pipe(X_train, y_train, X_test, )
print("OriginalGenerator metric", fit_predict(clf, new_train1, new_target1, X_test, y_test))

new_train1, new_target1 = GANGenerator().generate_data_pipe(X_train, y_train, X_test, )
print("GANGenerator metric", fit_predict(clf, new_train1, new_target1, X_test, y_test))

Timeseries GAN generation TimeGAN

You can easily adjust code to generate multidimensional timeseries data. Basically it extracts days, months and year from date. Demo how to use in the example below:

import pandas as pd
import numpy as np
from tabgan.utils import get_year_mnth_dt_from_date,make_two_digit,collect_dates
from tabgan.sampler import OriginalGenerator, GANGenerator


train_size = 100
train = pd.DataFrame(
        np.random.randint(-10, 150, size=(train_size, 4)), columns=list("ABCD")
    )
min_date = pd.to_datetime('2019-01-01')
max_date = pd.to_datetime('2021-12-31')
d = (max_date - min_date).days + 1

train['Date'] = min_date + pd.to_timedelta(pd.np.random.randint(d, size=train_size), unit='d')
train = get_year_mnth_dt_from_date(train, 'Date')

new_train, new_target = GANGenerator(gen_x_times=1.1, cat_cols=['year'], bot_filter_quantile=0.001,
                                     top_filter_quantile=0.999,
                                     is_post_process=True, pregeneration_frac=2, only_generated_data=False).\
                                     generate_data_pipe(train.drop('Date', axis=1), None,
                                                        train.drop('Date', axis=1)
                                                                    )
new_train = collect_dates(new_train)

Experiments

Datasets and experiment design

Check for data generation quality Just use built-in function

compare_dataframes(original_df, generated_df) # return between 0 and 1

Running experiment

To run experiment follow these steps:

  1. Clone the repository. All required dataset are stored in ./Research/data folder
  2. Install requirements pip install -r requirements.txt
  3. Run all experiments python ./Research/run_experiment.py. Run all experiments python run_experiment.py. You may add more datasets, adjust validation type and categorical encoders.
  4. Observe metrics across all experiment in console or in ./Research/results/fit_predict_scores.txt

Experiment design

Experiment design and workflow

Picture 1.1 Experiment design and workflow

Results

To determine the best sampling strategy, ROC AUC scores of each dataset were scaled (min-max scale) and then averaged among the dataset.

Table 1.2 Different sampling results across the dataset, higher is better (100% - maximum per dataset ROC AUC)

dataset_name None gan sample_original
credit 0.997 0.998 0.997
employee 0.986 0.966 0.972
mortgages 0.984 0.964 0.988
poverty_A 0.937 0.950 0.933
taxi 0.966 0.938 0.987
adult 0.995 0.967 0.998

Citation

If you use GAN-for-tabular-data in a scientific publication, we would appreciate references to the following BibTex entry: arxiv publication:

@misc{ashrapov2020tabular,
      title={Tabular GANs for uneven distribution}, 
      author={Insaf Ashrapov},
      year={2020},
      eprint={2010.00638},
      archivePrefix={arXiv},
      primaryClass={cs.LG}
}

References

[1] Lei Xu LIDS, Kalyan Veeramachaneni. Synthesizing Tabular Data using Generative Adversarial Networks (2018). arXiv: 1811.11264v1 [cs.LG]

[2] Alexia Jolicoeur-Martineau and Kilian Fatras and Tal Kachman. Generating and Imputing Tabular Data via Diffusion and Flow-based Gradient-Boosted Trees ((2023) https://github.com/SamsungSAILMontreal/ForestDiffusion [cs.LG]

[3] Lei Xu, Maria Skoularidou, Alfredo Cuesta-Infante, Kalyan Veeramachaneni. Modeling Tabular data using Conditional GAN. NeurIPS, (2019)

[4] Vadim Borisov and Kathrin Sessler and Tobias Leemann and Martin Pawelczyk and Gjergji Kasneci. Language Models are Realistic Tabular Data Generators. ICLR, (2023)

tabular-data-generation's People

Contributors

diyago avatar elmaxpain avatar deepsource-autofix[bot] avatar dayyass avatar dependabot[bot] avatar deepsourcebot avatar gthd avatar savioratharv avatar

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