Tutorials and code for CRI bioinformatics workshop.

1. Install R

• Visit this link and download the latest R version.

2. Install RStudio

• Visit this link and download the latest RStudio.

3. Clone tutorial repository. Open a terminal and confirm that Git is installed.

git --help

Create a directory to house data and tutorial code.

mkdir ~/cri_bootcamp/
cd ~/cri_bootcamp/

Clone current repo

git clone https://github.com/crigrants/CRI_bioinformatics_workshop.git

4. Download data (~36 Gb) Download Data

wget https://zenodo.org/record/6325603/files/utility.zip .
unzip utility.zip

1. Open RStudio and set the current working directory setwd(~/cri_bootcamp)
2. Open the file CRI_bioinformatics_workshop/tutorials/package_installation.qmd

To begin, we will load several T cell datasets from the ...

1. Open the file CRI_bioinformatics_workshop/tutorials/data_exploration.qmd.