Comments (2)
HiC-Pro contact statistics generated by version 1.0.0
HiC-Pro contact statistics generated by version 2.0.0
from hic.
I think this issue has been solbed. To keep track of the solution, the v.1.0.0
did not remove duplicates by default.
This has been changed in the v2.0.0
where duplicates are now removed by default.
from hic.
Related Issues (20)
- Change bwt2_index input to take input tar/tar.gz file rather than path + base name
- Bowtie2 Mapping Alignment exceeded running time limit error HOT 3
- Fastqc in MultiQC report HOT 2
- Default insulation methods HOT 1
- Include pairtools protocol HOT 3
- Certain sample names produce a missing header error on INPUT_CHECK:SAMPLESHEET_CHECK step HOT 2
- Put FastQ File Splitting in a Dedicated Process HOT 8
- Exit error 140 HOT 2
- COOLTOOLS_INSULATION creates invalid software version on Azure Batch
- sort extreme large pairs files
- samplesheet error HOT 3
- java error HOT 1
- NFCORE_HIC:HIC:CUSTOM_DUMPSOFTWAREVERSIONS (1) terminated with an error exit status (1) HOT 4
- NFCORE_HIC:HIC:FASTQC error: fastqc tmp dir on HPC
- add parameter to tune balancing HOT 1
- add calder2 module
- Add loop calling tools HOT 1
- Improve multiQC report
- [Question] Mad-max filter HOT 1
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