nhhaidee Goto Github PK

bertviz

BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)

bioconda-recipes

Conda recipes for the bioconda channel.

connected-unets-and-more

Basic UNet, AUNet, and ResNet architecture models and new variations: Connected-UNets, Connected-AUNets, and Connected-ResUNets architecture models

coursera-webpages

covarplot

CoVarPlot - Covarage Variant Plots for viral whole genome sequencing

d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

d3-hierarchy

2D layout algorithms for visualizing hierarchical data.

d3-scale

Encodings that map abstract data to visual representation.

datascience_capstone

IBM Data Science Capstone

datasets

TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...

dnabert

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

echarts

Apache ECharts is a powerful, interactive charting and data visualization library for browser

embedded_course1_finalassessment

embeddedcoursera

embeddedcoursera_assigment2

end2end-all-conv

Deep Learning to Improve Breast Cancer Detection on Screening Mammography

evomil

Prediction of virus-host association using protein language models and multiple instance learning

fasta2lmdb

Quickly save FASTA sequences to an LMDB key-value database for rapid retrieval.

flu-cnn

dataset and code for paper "FluCNN: Predicting host tropism of influenza A viruses via character-level convolutional networks"

ggtree

:christmas_tree:Visualization and annotation of phylogenetic trees

influenza-subtyping

a deep learning method for Influenza Subtyping

intarna

Efficient target prediction incorporating accessibility of interaction sites

kaggle_rsna_breast_cancer

1st place of Kaggle's RSNA Screening Mammography Breast Cancer Detection competition

mirai

This repository was used to develop Mirai, the risk model described in: Towards Robust Mammography-Based Models for Breast Cancer Risk.

multi-package-containers

Testing building mulled containers for multi-requirement tools.

nf-flu

Influenza genome analysis Nextflow workflow

nf-ionampliseq

nf-test-datasets

This repository contains test data for nextflow

nf-test-datasets-1

Nextflow workflow test datasets for CI

nf-villumina

Generic viral Illumina sequence analysis pipeline