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nf-test-datasets-1's Introduction

Nextflow test datasets for CI

This repo contains small viral sequencing datasets for different sequencing platforms (Illumina, Ion Torrent, Nanopore).

Workflows using test datasets will specify the URL to a test dataset as input and Nextflow will figure out how to get the data to execute the workflow on it, e.g. in a test profile specified in a test.config

params.input = https://github.com/peterk87/nf-test-datasets/raw/iontorrent/ampliseq/a.bam

nf-test-datasets-1's People

Contributors

peterk87 avatar nhhaidee avatar

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