ocxtal Goto Github PK

libpsort

pthread-parallel, write-combining integer radixsort

libptask

pthreads-based parallel task dispatcher

libsr

sequence reader, wrapper of libfna and libgref

libtree

wrapper of ngx_rbtree red-black-tree implementation in nginx core library

libzf

wrapper of stdio / zlib / bzip2, providing zlib-compatible apis

lmm.h

malloc wrapper with context-local naive memory allocation

minialign

[IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads

miura

Miura-fold pattern generator

multiplicationtable

nanosim

Nanopore sequence read simulator

nd

streamed blob manipulator

ocxtal.github.io

ohayo

Manipulating PC power button via CH340 relay module

opa64

Armv8 A64 Assembly & Intrinsics Guide Server

opts.h

simple and powerful option parser library in C99

pbsim

This is an updated mirror of the original PacBio Read Simulator

qr

print QR code on terminal

rbread

Header-only, gzread-like reader for gzip, bz2, and xz.

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

seqlib

A codebase for sequence analysis projects. Highly experimental and in development.

smith-waterman-simd

sushi

sw

simple Smith-Waterman

tinymasker

ultrasensitive alignment for masking repeats on assembly contigs

udon

BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing

unittest.h

simple, single-header unittesting framework for pure C99 codes

vfdc

table clock with NEC LD8035 VFD tubes on PSoC5LP

vg

tools for working with genome variation graphs

worthless

for testing effective coding and version control

xbyak_aarch64