odavalos / merced-weather Goto Github PK

This project forked from jdjohn215/milwaukee-weather

Use Github Actions to automatically update a weather graph every day

R 100.00%

merced-weather's Introduction

Automated Tufte-style weather graphs

This repository creates the weather graph below (inspired by Edward Tufte) using R's {{ggplot2}} package. Updated data is pulled directly from NOAA's servers in CSV format. The entire process is automated using Github Actions.

This repo may be useful in three ways.

replicating or adapting this graph for a different weather station
learning more about data viz with ggplot2
learning more about Github Actions with R

Full disclosure: Original author is John Johnson

About this data

NOAA provides daily data for weather stations in the Global Historical Climatological Network (GHCN).

Citation:

Menne, M.J., I. Durre, B. Korzeniewski, S. McNeal, K. Thomas, X. Yin, S. Anthony, R. Ray, R.S. Vose, B.E. Gleason, and T.G. Houston, 2012: Global Historical Climatology Network - Daily (GHCN-Daily), Version 3.26. NOAA National Climatic Data Center. http://doi.org/10.7289/V5D21VHZ [February 21, 2022].

Accessing data for a different station

For every weather station in the daily GHCN, NOAA maintains a file with the station's entire daily history. Each day, they append a new record. In my observation, records are typically lagged by a few days.

Each weather station is assigned a unique indicator. The full list of station names, coordinates, and unique IDs is available here.

I use a merged file (data/GHCN_USC00045532_USW00023257.csv) that contains daily weather reports from Merced Regional Airport stations (GHCN:USC00045532 & GHCN:USW00023257). The start date is June 1, 1899.

GHCN:USC00045532
- Historical data starting from June 1, 1899

GHCN:USW00023257
- More recent up to date data starting from August 1, 1998

Refer to R/Retrieve_GHCN_USC00045532_USW00023257.R for a demonstration of downloading and processing this dataset. See NOAA's documentation for detailed descriptions of the original variable definitions.

Replicating or altering the graph

The image graphs/DailyHighTemp_USC00045532_USW00023257.png is created by R/BuidlDailyHigh.R. See the README in /graphs for a step-by-step tutorial.

Automatic Updating with Github Actions

At a high level, the automated workflow:

(1) runs the script to retrieve the updated data

(2) commits the updated dataset to the repository

(3) runs the script to build the graph

(4) commits the graph to the repository. All this takes less than 1 minute per run.

See the README in /.github/workflows for a line-by-line discussion of the workflow file.

merced-weather's People

Contributors

merced-weather's Issues

MASS installation failing

Here is the log.

Installing MASS [7.3-54] ...
    FAILED
Error installing package 'MASS':
Error: Error: install of package 'MASS' failed [error code 1]
================================

* installing *source* package ‘MASS’ ...
** package ‘MASS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/usr/share/R/include" -DNDEBUG       -fpic  -g -O2 -ffile-prefix-map=/build/r-base-JhpCKt/r-base-4.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -c MASS.c -o MASS.o
MASS.c:37:23: error: unknown type name ‘Sint’; did you mean ‘uint’?
   37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
      |                       ^~~~
      |                       uint
MASS.c:37:33: error: unknown type name ‘Sint’; did you mean ‘uint’?
   37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
      |                                 ^~~~
      |                                 uint
MASS.c:37:54: error: unknown type name ‘Sint’; did you mean ‘uint’?
   37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
      |                                                      ^~~~
      |                                                      uint
MASS.c:38:27: error: unknown type name ‘Sint’; did you mean ‘uint’?
   38 |           double *stress, Sint *trace, double *aa, double *tol)
      |                           ^~~~
      |                           uint
MASS.c:168:8: error: unknown type name ‘Sint’
  168 | static Sint *ord;               /* ranks of dissimilarities */
      |        ^~~~
MASS.c:169:8: error: unknown type name ‘Sint’
  169 | static Sint *ord2;              /* inverse ordering (which one is rank i?) */
      |        ^~~~
MASS.c:170:8: error: unknown type name ‘Sint’
  170 | static Sint n;                  /* number of  dissimilarities */
      |        ^~~~
MASS.c:171:8: error: unknown type name ‘Sint’
  171 | static Sint nr;                 /* number of data points */
      |        ^~~~
MASS.c:172:8: error: unknown type name ‘Sint’
  172 | static Sint nc;                 /* # cols of  fitted configuration */
      |        ^~~~
MASS.c:181:31: error: unknown type name ‘Sint’; did you mean ‘uint’?
  181 | VR_mds_fn(double *, double *, Sint *, double *, Sint *,
      |                               ^~~~
      |                               uint
MASS.c:181:49: error: unknown type name ‘Sint’; did you mean ‘uint’?
  181 | VR_mds_fn(double *, double *, Sint *, double *, Sint *,
      |                                                 ^~~~
      |                                                 uint
MASS.c:182:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
  182 |           double *, Sint *, Sint *, double *, Sint *, double *);
      |                     ^~~~
      |                     uint
MASS.c:182:29: error: unknown type name ‘Sint’; did you mean ‘uint’?
  182 |           double *, Sint *, Sint *, double *, Sint *, double *);
      |                             ^~~~
      |                             uint
MASS.c:182:47: error: unknown type name ‘Sint’; did you mean ‘uint’?
  182 |           double *, Sint *, Sint *, double *, Sint *, double *);
      |                                               ^~~~
      |                                               uint
MASS.c:188:18: error: unknown type name ‘Sint’; did you mean ‘uint’?
  188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
      |                  ^~~~
      |                  uint
MASS.c:188:28: error: unknown type name ‘Sint’; did you mean ‘uint’?
  188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
      |                            ^~~~
      |                            uint
MASS.c:188:38: error: unknown type name ‘Sint’; did you mean ‘uint’?
  188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
      |                                      ^~~~
      |                                      uint
MASS.c:188:48: error: unknown type name ‘Sint’; did you mean ‘uint’?
  188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
      |                                                ^~~~
      |                                                uint
MASS.c:189:18: error: unknown type name ‘Sint’; did you mean ‘uint’?
  189 |                  Sint *ordee, double *xx, double *p)
      |                  ^~~~
      |                  uint
MASS.c: In function ‘fminfn’:
MASS.c:240:5: error: unknown type name ‘Sint’; did you mean ‘uint’?
  240 |     Sint  do_derivatives = 0;
      |     ^~~~
      |     uint
MASS.c:243:5: warning: implicit declaration of function ‘VR_mds_fn’; did you mean ‘VR_mds_unload’? [-Wimplicit-function-declaration]
  243 |     VR_mds_fn(y, yf, &n, &ssq, ord2, x, &nr, &nc, 0, &do_derivatives,
      |     ^~~~~~~~~
      |     VR_mds_unload
MASS.c: In function ‘fmingr’:
MASS.c:252:5: error: unknown type name ‘Sint’; did you mean ‘uint’?
  252 |     Sint  do_derivatives = 1;
      |     ^~~~
      |     uint
MASS.c: At top level:
MASS.c:263:26: error: unknown type name ‘Sint’; did you mean ‘uint’?
  263 | VR_mds_dovm(double *val, Sint *maxit, Sint *trace, double *xx, double *tol)
      |                          ^~~~
      |                          uint
MASS.c:263:39: error: unknown type name ‘Sint’; did you mean ‘uint’?
  263 | VR_mds_dovm(double *val, Sint *maxit, Sint *trace, double *xx, double *tol)
      |                                       ^~~~
      |                                       uint
MASS.c:280:34: error: unknown type name ‘Sint’; did you mean ‘uint’?
  280 | VR_mds_fn(double *y, double *yf, Sint *pn, double *pssq, Sint *pd,
      |                                  ^~~~
      |                                  uint
MASS.c:280:58: error: unknown type name ‘Sint’; did you mean ‘uint’?
  280 | VR_mds_fn(double *y, double *yf, Sint *pn, double *pssq, Sint *pd,
      |                                                          ^~~~
      |                                                          uint
MASS.c:281:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
  281 |           double *x, Sint *pr, Sint *pncol, double *der,
      |                      ^~~~
      |                      uint
MASS.c:281:32: error: unknown type name ‘Sint’; did you mean ‘uint’?
  281 |           double *x, Sint *pr, Sint *pncol, double *der,
      |                                ^~~~
      |                                uint
MASS.c:282:11: error: unknown type name ‘Sint’; did you mean ‘uint’?
  282 |           Sint *do_derivatives, double *p)
      |           ^~~~
      |           uint
MASS.c:356:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |            ^~~~
      |            uint
MASS.c:356:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                     ^~~~
      |                     uint
MASS.c:356:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                               ^~~~~~
      |                               float
MASS.c:356:42: error: unknown type name ‘Sint’; did you mean ‘uint’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                          ^~~~
      |                                          uint
MASS.c:356:51: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                   ^~~~~~
      |                                                   float
MASS.c:356:62: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                              ^~~~~~
      |                                                              float
MASS.c:373:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |            ^~~~
      |            uint
MASS.c:373:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                     ^~~~
      |                     uint
MASS.c:373:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                               ^~~~~~
      |                               float
MASS.c:373:42: error: unknown type name ‘Sint’; did you mean ‘uint’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                          ^~~~
      |                                          uint
MASS.c:373:51: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                   ^~~~~~
      |                                                   float
MASS.c:373:62: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                              ^~~~~~
      |                                                              float
Traceback (most recent calls last):
12: renv::restore()
11: renv_restore_run_actions(project, diff, current, lockfile, rebuild)
10: renv_install_impl(records)
 9: renv_install_staged(records)
 8: renv_install_default(records)
 7: handler(package, renv_install_package(record))
 6: renv_install_package(record)
 5: withCallingHandlers(renv_install_package_impl(record), error = function(e) {
        vwritef("\tFAILED")
        writef(e$output)
    })
 4: renv_install_package_impl(record)
 3: r_cmd_install(package, path)
 2: r_exec_error(package, output, "install", status)
 1: stop(error)
Execution halted
MASS.c:391:13: error: unknown type name ‘Sint’; did you mean ‘uint’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |             ^~~~
      |             uint
MASS.c:391:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                      ^~~~
      |                      uint
MASS.c:391:32: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                ^~~~~~
      |                                float
MASS.c:391:43: error: unknown type name ‘Sint’; did you mean ‘uint’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                           ^~~~
      |                                           uint
MASS.c:391:52: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                    ^~~~~~
      |                                                    float
MASS.c:391:63: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                               ^~~~~~
      |                                                               float
MASS.c:409:13: error: unknown type name ‘Sint’; did you mean ‘uint’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |             ^~~~
      |             uint
MASS.c:409:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                      ^~~~
      |                      uint
MASS.c:409:32: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                ^~~~~~
      |                                float
MASS.c:409:43: error: unknown type name ‘Sint’; did you mean ‘uint’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                           ^~~~
      |                                           uint
MASS.c:409:52: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                    ^~~~~~
      |                                                    float
MASS.c:409:63: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
      |                                                               ^~~~~~
      |                                                               float
MASS.c:428:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
  428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
      |            ^~~~
      |            uint
MASS.c:428:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
  428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
      |                     ^~~~
      |                     uint
MASS.c:428:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
      |                               ^~~~~~
      |                               float
MASS.c:428:42: error: unknown type name ‘Sfloat’; did you mean ‘float’?
  428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
      |                                          ^~~~~~
      |                                          float
MASS.c:428:53: error: unknown type name ‘Sint’; did you mean ‘uint’?
  428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
      |                                                     ^~~~
      |                                                     uint
MASS.c:466:31: error: ‘VR_bcv_bin’ undeclared here (not in a function)
  466 |     {"VR_bcv_bin", (DL_FUNC) &VR_bcv_bin, 6},
      |                               ^~~~~~~~~~
MASS.c:467:31: error: ‘VR_den_bin’ undeclared here (not in a function)
  467 |     {"VR_den_bin", (DL_FUNC) &VR_den_bin, 5},
      |                               ^~~~~~~~~~
MASS.c:468:32: error: ‘VR_mds_dovm’ undeclared here (not in a function); did you mean ‘VR_mds_unload’?
  468 |     {"VR_mds_dovm", (DL_FUNC) &VR_mds_dovm, 5},
      |                                ^~~~~~~~~~~
      |                                VR_mds_unload
MASS.c:469:30: error: ‘VR_mds_fn’ undeclared here (not in a function); did you mean ‘VR_mds_unload’?
  469 |     {"VR_mds_fn", (DL_FUNC) &VR_mds_fn, 11},
      |                              ^~~~~~~~~
      |                              VR_mds_unload
MASS.c:470:37: error: ‘VR_mds_init_data’ undeclared here (not in a function)
  470 |     {"VR_mds_init_data", (DL_FUNC) &VR_mds_init_data, 7},
      |                                     ^~~~~~~~~~~~~~~~
MASS.c:472:32: error: ‘VR_phi4_bin’ undeclared here (not in a function)
  472 |     {"VR_phi4_bin", (DL_FUNC) &VR_phi4_bin, 6},
      |                                ^~~~~~~~~~~
MASS.c:473:32: error: ‘VR_phi6_bin’ undeclared here (not in a function)
  473 |     {"VR_phi6_bin", (DL_FUNC) &VR_phi6_bin, 6},
      |                                ^~~~~~~~~~~
MASS.c:474:30: error: ‘VR_sammon’ undeclared here (not in a function)
  474 |     {"VR_sammon", (DL_FUNC) &VR_sammon, 9},
      |                              ^~~~~~~~~
MASS.c:475:31: error: ‘VR_ucv_bin’ undeclared here (not in a function)
  475 |     {"VR_ucv_bin", (DL_FUNC) &VR_ucv_bin, 6},
      |                               ^~~~~~~~~~
make: *** [/usr/lib/R/etc/Makeconf:191: MASS.o] Error 1
ERROR: compilation failed for package ‘MASS’
* removing ‘/home/runner/work/_temp/Library/.renv/1/MASS’
Error: Process completed with exit code 1.

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