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imagej.github.io

The ImageJ wiki

inbase

Cache inteins.com InBase database locally as Pandas DataFrame.

inbaser

InBase Intein Database

intein_finder

Detect putative inteins in a given genome.

iq-frappa-plugin

Plugin for Andor iQ OpenSource (iQos) Python IDE

journals

Metamorph 7 journals

library-quality

mcb5429-final-project

ChIP-seq and RNA-seq pipelines for final project of Next Generation Sequencing class

mellone-rnai-screen

Colocalization analysis of RNAi ectopic centromeres using ImageJ

metamos

A metagenomic and isolate assembly and analysis pipeline built with AMOS

micromanager

Micro-Manager Open Source Microscopy Software (http://valelab.ucsf.edu/~MM/MMwiki/). SVN-tracking Git repository

micropoint-util

Andor MicroPoint motorized attenuator power conversion utility, to help support different software applications using different power scales

microscope-optical-input

Calculates power, etc of laser scanning photo-activation device

microscopy-overlay

Packages for Gentoo GNU/Linux for biological image acquisition and storage.

mpiboostunit

Toy MPI program using Boost MPI and GoogleTest

mpithread

Toy MPI programs with threading to debug SLURM scheduler misbehavior

openzfs-docs

OpenZFS Documentation

org-kanban

Kanban table for org-mode

osctc-planning.github.io

experiment

pages-gem

A simple Ruby Gem to bootstrap dependencies for setting up and maintaining a local Jekyll environment in sync with GitHub Pages

physcomitrellopsis_africana5074

podget

Podcast aggregator optimized for running as a scheduled job (i.e. cron) on Linux

poretools

a toolkit for working with Oxford nanopore data

publicfilesdemo

pyabc

distributed, likelihood-free inference

pyalc

Laser sled driver. Clone of Andor's Laser Combiner SDK freeing the hardware to respond to any Analog source

quickpalm

Automatically exported from code.google.com/p/quickpalm

quickpalm.future

Automatically exported from code.google.com/p/quickpalm.future

r-ecology-lesson

Data Carpentry R lessons on ecology

r-in-git