openanalytics/r-base Docker Image
To pull the image made in this repository from Docker Hub, use
sudo docker pull openanalytics/r-base
The relevant Docker Hub repository can be found at
https://hub.docker.com/r/openanalytics/r-base
To build the image from the Dockerfile, navigate into the root directory of this repository and run
sudo docker build -t openanalytics/r-base .
(c) Copyright Open Analytics NV, 2016-2020.
Would it be possible to update the image to 4.1 or 4.2 to get the native pipe?
Not sure if you're aware but Ubuntu image seems to be broken. If you try to update or install anything it throw error:
GPG error: https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/ InRelease:
The following signatures were invalid: EXPKEYSIG 51716619E084DAB9
Michael Rutter <[email protected]>
Here is article how to solve it:
https://www.bentoh.my/post/gpg-key-problem/
maybe it will be solved upstream but then the image need to be updated (rebuild).
I could not successfully build the openanalytics/r-base image using sudo docker build -t openanalytics/r-base .. Could you please look into this:
Get:1 http://archive.ubuntu.com/ubuntu focal InRelease [265 kB]
Get:2 https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/ InRelease [3,622 B]
Get:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB]
Get:4 http://archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB]
Get:5 http://security.ubuntu.com/ubuntu focal-security InRelease [114 kB]
Get:6 https://cloud.r-project.org/bin/linux/ubuntu focal-cran40/ Packages [42.3 kB]
Get:7 http://archive.ubuntu.com/ubuntu focal/universe amd64 Packages [11.3 MB]
Get:8 http://archive.ubuntu.com/ubuntu focal/main amd64 Packages [1,275 kB]
Get:9 http://archive.ubuntu.com/ubuntu focal/restricted amd64 Packages [33.4 kB]
Get:10 http://archive.ubuntu.com/ubuntu focal/multiverse amd64 Packages [177 kB]
Get:11 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [1,245 kB]
Get:12 http://archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [299 kB]
Get:13 http://archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [29.8 kB]
Get:14 http://archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [973 kB]
Get:15 http://archive.ubuntu.com/ubuntu focal-backports/universe amd64 Packages [4,305 B]
Get:16 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [829 kB]
Get:17 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [274 kB]
Get:18 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [27.6 kB]
Get:19 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [716 kB]
Fetched 17.9 MB in 3s (5,321 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:
The following packages have unmet dependencies:
r-recommended : Depends: r-cran-cluster (>= 1.9.6-2) but it is not going to be installed
Depends: r-cran-mgcv (>= 1.1.5) but it is not going to be installed
Depends: r-cran-rpart (>= 3.1.20) but it is not going to be installed
Depends: r-cran-survival (>= 2.13.2-1) but it is not going to be installed
Depends: r-cran-mass but it is not going to be installed
Depends: r-cran-class but it is not going to be installed
Depends: r-cran-nnet but it is not going to be installed
Depends: r-cran-matrix but it is not going to be installed
E: Unable to correct problems, you have held broken packages.
The command '/bin/sh -c apt-get update && apt-get install -y --no-install-recommends littler r-cran-littler r-base=${R_BASE_VERSION}* r-base-core=${R_BASE_VERSION}* r-base-dev=${R_BASE_VERSION}* r-recommended=${R_BASE_VERSION}* && echo 'options(repos = c(CRAN = "https://cloud.r-project.org/"), download.file.method = "libcurl")' >> /etc/R/Rprofile.site && echo 'source("/etc/R/Rprofile.site")' >> /etc/littler.r && ln -s /usr/share/doc/littler/examples/install.r /usr/local/bin/install.r && ln -s /usr/share/doc/littler/examples/install2.r /usr/local/bin/install2.r && ln -s /usr/share/doc/littler/examples/installGithub.r /usr/local/bin/installGithub.r && ln -s /usr/share/doc/littler/examples/testInstalled.r /usr/local/bin/testInstalled.r && install.r docopt && rm -rf /tmp/downloaded_packages/ /tmp/*.rds && rm -rf /var/lib/apt/lists/*' returned a non-zero code: 100
Docker shows a warning because AMD images are not well supported on Apple Sillicon. Newer versions of ubuntu images are multiarchitecture and support ARM better.
@Data-Mastery: available now on Docker Hub: https://hub.docker.com/repository/docker/openanalytics/r-base
I am working in a project where I am using the echarts4r package. But it depends on R (≥ 4.1.0). Do you have a plan to update this in near future?
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