pemistahl / grex Goto Github PK

[src/grapheme.rs:154] &sorted_repetitions = [
    Some((["A", "A", "A"], 0..6, 2)),
    Some((["A", "A"], 0..5, 4)),
    Some((["A"], 0..6, 6)),
]

λ scoop install grex
Installing 'grex' (1.2.0) [64bit]
grex-v1.2.0-x86_64-pc-windows-msvc.zip (792,6 KB) [==========================================================================================================================] 100%
Checking hash of grex-v1.2.0-x86_64-pc-windows-msvc.zip ... ERROR Hash check failed!
App:         main/grex
URL:         https://github.com/pemistahl/grex/releases/download/v1.2.0/grex-v1.2.0-x86_64-pc-windows-msvc.zip
First bytes: 50 4B 03 04 14 00 00 00
Expected:    d075efdbccb01c8b093b6c5120d064cc5ead534dec483c1a3d43cc4543d940ea
Actual:      da9c50a4e19cbf7b1c4a001a9252c1a097b8eebbb9ec0bbf3f88bc79030e7d73

$ sudo cargo install grex
    Updating crates.io index
error: process didn't exit successfully: `rustc -vV` (exit status: 127)
--- stderr
rustc: relocation error: /lib64/librustc_driver-eaa0856b54809337.so: symbol _ZNK4llvm18DiagnosticLocation15getAbsolutePathEv, version LLVM_11 not defined in file libLLVM-11.so with link time reference

            Mean        Std.Dev.    Min         Median      Max
real        0.072       0.014       0.051       0.070       0.096       
user        0.058       0.011       0.046       0.062       0.075       
sys         0.015       0.010       0.005       0.008       0.030       

            Mean        Std.Dev.    Min         Median      Max
real        16.872      0.171       16.699      16.853      17.190      
user        14.745      0.178       14.541      14.745      15.062      
sys         2.125       0.019       2.104       2.126       2.157       

warning: unused return value of `std::mem::replace` that must be used
  --> src/regexp/regexp.rs:47:9
   |
47 | /         std::mem::replace(
48 | |             test_cases,
49 | |             test_cases.iter().map(|it| it.to_lowercase()).collect_vec(),
50 | |         );
   | |__________^
   |
   = note: `#[warn(unused_must_use)]` on by default
   = note: if you don't need the old value, you can just assign the new value directly

warning: 1 warning emitted

$ grex _001715_1406309_.pdf
^_001715_1406309_\.pdf$

$ grex -r _001715_1406309_.pdf
^_0{2}1715_1406309_\.pdf$

^_[0-9]*_[0-9]_\.pdf$

^_[0-9]*_[0-9]_\.pdf$

^_[0-9]*_[0-9]_\.[a-z]*$
^_[0-9]{6}_[0-9]{7}_\.[a-z]{3}$

error: The following required arguments were not provided:
    <INPUT>...
    --file <FILE>

<iframe src="//player.bilibili.com/player.html?aid=303065226&bvid=BV1dP411n7bc&cid=833485551&page=1" scrolling="no" border="0" frameborder="no" framespacing="0" allowfullscreen="true"> </iframe>

<iframe src="//player.bilibili.com/player.html?aid=261233537&bvid=BV1xe411j7EQ&cid=851171461&page=1" scrolling="no" border="0" frameborder="no" framespacing="0" allowfullscreen="true"> </iframe>

<iframe src="//player.bilibili.com/player.html?aid=558528772&bvid=BV1Ee4y1r7wX&cid=848823074&page=1" scrolling="no" border="0" frameborder="no" framespacing="0" allowfullscreen="true"> </iframe>


<iframe src="//player.bilibili.com/player.html?aid=455751094&bvid=BV1U5411s7RU&cid=383073940&page=1" scrolling="no" border="0" frameborder="no" framespacing="0" allowfullscreen="true"> </iframe>

aid=303065226&bvid=BV1dP411n7bc&cid=833485551
aid=261233537&bvid=BV1xe411j7EQ&cid=851171461
aid=558528772&bvid=BV1Ee4y1r7wX&cid=848823074
aid=455751094&bvid=BV1U5411s7RU&cid=383073940

aid=([0-9]+)&bvid=([0-9a-zA-Z]+)&cid=([0-9]+)

grex --file names.txt  49.84s user 14.48s system 89% cpu 1:12.25 total

% grex "- Input starting with a hyphen" 
error: Found argument '- ' which wasn't expected, or isn't valid in this context

USAGE:
    grex [FLAGS] <INPUT>... --file <FILE>

For more information try --help

[lots of errors]
error: aborting due to 204 previous errors

For more information about this error, try `rustc --explain E0277`.
error: could not compile `ndarray`.

→ cat groups  | grex --file -
error: the specified file could not be found

timeit ()
{
    if [ $# -ge 1 ]; then
        local info_color=$(printf "${info_color}");
        local reset_colors=$(printf "${reset_colors}");
        command time -f "\nTime output:\n------------\n\n  * Command: ${info_color}%C${reset_colors}\n  * Elapsed wall time: ${info_color}%E${reset_colors} = ${info_color}%e seconds${reset_colors}\n  * Elapsed CPU time:\n     - User: ${info_color}%U${reset_colors}\n     - Sys: ${info_color}%S${reset_colors}\n  * CPU usage: ${info_color}%P${reset_colors}\n  * Context switching:\n     - Voluntarily (e.g.: waiting for I/O operation): ${info_color}%w${reset_colors}\n     - Involuntarily (time slice expired): ${info_color}%c${reset_colors}\n  * Maximum resident set size (RSS: memory) (kiB): ${info_color}%M${reset_colors}\n  * Number of times the process was swapped out of main memory: ${info_color}%W${reset_colors}\n  * Filesystem:\n     - # of inputs: ${info_color}%I${reset_colors}\n     - # of outputs: ${info_color}%O${reset_colors}\n  * Exit status: ${info_color}%x${reset_colors}\n" "${@}";
        return 0;
    else
        printf "${help_color}Usage:${reset_colors}   timeit <command> <args>\n\n${help_color}Purpose:${reset_colors} Get information about run time, CPU usage, memory usage, ... of a command.\n\n";
        return 1;
    fi
}

for collection in  $(awk -F '__' '{ print $1 }' input.txt | sort -u) ; do
     echo ${collection};
     timeit grex -c --file <(grep "$collection" input.txt);
     echo;
done > output.txt 2>&1

❯ grep -E '^\w|Elapsed wall time|RSS' output.txt |grep -v output
bergman
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 4276
c2h2_zfs
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 3460
cisbp
  * Elapsed wall time: 0:00.08 = 0.08 seconds
  * Maximum resident set size (RSS: memory) (kiB): 20628
dbcorrdb
  * Elapsed wall time: 0:01.97 = 1.97 seconds
  * Maximum resident set size (RSS: memory) (kiB): 895680
elemento
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Maximum resident set size (RSS: memory) (kiB): 7436
factorbook
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Maximum resident set size (RSS: memory) (kiB): 5592
flyfactorsurvey
  * Elapsed wall time: 0:11.83 = 11.83 seconds
  * Maximum resident set size (RSS: memory) (kiB): 4917700
hdpi
  * Elapsed wall time: 0:00.12 = 0.12 seconds
  * Maximum resident set size (RSS: memory) (kiB): 42020
hocomoco
  * Elapsed wall time: 0:00.93 = 0.93 seconds
  * Maximum resident set size (RSS: memory) (kiB): 127308
homer
  * Elapsed wall time: 0:04.16 = 4.16 seconds
  * Maximum resident set size (RSS: memory) (kiB): 1257744
idmmpmm
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 3536
jaspar
  * Elapsed wall time: 0:00.02 = 0.02 seconds
  * Maximum resident set size (RSS: memory) (kiB): 6296
neph
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 3028
predrem
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 3920
scertf
  * Elapsed wall time: 0:00.04 = 0.04 seconds
  * Maximum resident set size (RSS: memory) (kiB): 7600
stark
  * Elapsed wall time: 0:00.06 = 0.06 seconds
  * Maximum resident set size (RSS: memory) (kiB): 40160
swissregulon
  * Elapsed wall time: 0:00.24 = 0.24 seconds
  * Maximum resident set size (RSS: memory) (kiB): 62404
taipale
memory allocation of 66336431728 bytes failedCommand terminated by signal 6
  * Elapsed wall time: 1:40.82 = 100.82 seconds
  * Maximum resident set size (RSS: memory) (kiB): 45748
taipale_cyt_meth
  * Elapsed wall time: 0:17.88 = 17.88 seconds
  * Maximum resident set size (RSS: memory) (kiB): 8250552
taipale_tf_pairs
  * Elapsed wall time: 0:13.25 = 13.25 seconds
  * Maximum resident set size (RSS: memory) (kiB): 6866384
tfdimers
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 5524
tiffin
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Maximum resident set size (RSS: memory) (kiB): 3216
transfac_pro
  * Elapsed wall time: 0:00.15 = 0.15 seconds
  * Maximum resident set size (RSS: memory) (kiB): 43884
transfac_public
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Maximum resident set size (RSS: memory) (kiB): 5076
yetfasco
  * Elapsed wall time: 0:00.06 = 0.06 seconds
  * Maximum resident set size (RSS: memory) (kiB): 31096

bergman
^bergman__(?:s(?:hn\-ZFP[12]|na|d)|(?:dif_)?Rel|S(?:tat92E|u_H_)|E(?:cR_usp|ip74EF)|p(?:r(?:d\-[HP]D|os)|ho)|A(?:bd\-B|ef1)|croc|d(?:l\-[AB]|sx)|Hr46|TFAM|mirr|retn|e(?:sg|ve|n)|Cf2|Ubx|ftz|g(?:cm|rh)|ovo|ems|tll|(?:bc|ca)d|vnd|(?:pn|K)r|(?:b[iy]|pa|ti|ze)n|srp|usp|hb|oc)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 88%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 4276
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


c2h2_zfs
^c2h2_zfs__M(?:0(?:4(?:0[0146]|[68][29])|369)|(?:03[79]|184|201)3|1808|3(?:269|383|9(?:1[13]|28))|(?:0(?:38|41)|38[37])5|4(?:205|021|331)|(?:382|4(?:29|44))7|3984|(?:243|380)0|5(?:1(?:0[37]|1[146-8]|2[035]|47|84)|280))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 3460
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


cisbp
^cisbp__M(?:0(?:(?:(?:0(?:0[479]|1[178]|3[367]|6[36]|8[2-5])|1(?:3[0-357]|6[2-46-8]|7[24-9])|2(?:2[0-58]|6[013-689]|8[347])|3(?:2[0-467]|3[0-38]|4[124679]|5[257-9]|6[1-37]|8[346])|12[68]|4(?:5[68]|74)|5(?:0[06-8]|3[02-58]|4[46])|15[0-4689]|6(?:1[03]|2[289]|3[0-4689]|6[589]|7[0-2479]|8[5-9])|7(?:8[2-8]|9[25-8])|8(?:0[1-39]|2[039]|3[278]|5[057-9]|6[02-489]|7[0-249]))|495)|022)|0(?:75|81)[0-7]|1(?:0(?:7[0-479]|8[0346-9])|1(?:0[0-3569]|1[79]|3[5-79]|5[13-9]|6[03467]|7[0135-8]|8[0279])|2(?:0[0-25]|1[179]|2[023568]|4[0-35-7]|9[689])|3(?:5[3-9]|75)|30[01]|4(?:1[89]|22|5[0-7]|6[59]|7[01]|9[14579])|5(?:5[0-4]|7[37-9])|04[0-59]|6(?:1[125]|3[0-59]|6[458])|8(?:4[0137-9]|7[0-589])|94[24-6])|0(?:04|46|64)1|119[1347-9]|127[23]|011[0145]|(?:0(?:07|58)|150)6|0099|125[12]|183[6-9]|2(?:0(?:6[013-59]|8[369]|9[0134])|1(?:0[0-358]|1[124589]|2[0-24]|4[2-467]|5[018]|6[29]|7[0467]|8[1348]|91)|2(?:1[134]|2[38]|4[579])|3(?:3[0489]|4[1347-9]|5[1459]|6[1-3]|7[378]|8[14-9])|4(?:2[1-48]|3[78]|6[457]|7[1-47]|[89][34])|5(?:1[23]|2[2-6]|3[0-268]|5[013-7]|8[124-8]|9[0145])|136|459|6(?:06|[17]9|8[12])|238|768|863|91[6-9])|044[0-48]|160[0-5]|(?:024|200)[0-8]|(?:0(?:10|41)|205)[02-9]|114[0-6]|154[0135-9]|3(?:0(?:2[0-35-8]|3[1-79])|1(?:1[2-46-9]|2[0-48])|4(?:0[1-47-9]|7[0-246-9]|8[0-5])|56[0-25-9]|(?:[23]9|50)[0-8]|(?:13|25)[02-9]|6(?:1[0-8]|[25][02-9]|6[0-6])|19[0135-9]|7(?:6[0135-9]|9[124-69])|80[013-8]|73[02-689]|9(?:2[02-467]|7[02-689]))|(?:025|389)[0-357-9]|(?:18|31)5[014-9]|(?:088|372)[0-36-9]|(?:023|186|298|336)[0-57-9]|(?:027|386)[0-68]|(?:164|239)[0-2]|2207|2(?:07|40)[26]|052[0-278]|244[1-5]|(?:193|2(?:02|56)|3(?:00|32))[013-9]|4(?:0(?:4[0-357-9]|6[04-9]|7[014-9]|9[0-36-9])|1(?:0[0-57-9]|1[0-68]|6[0135-79]|8[0689])|2(?:0[1568]|1[1267]|3[35]|4[129]|5[35-9]|6[01568]|7[034679]|8[0-3]|9[0-2])|3(?:07|1[26]|3[056]|4[2-4]|5[13568]|6[04-6]|7[05-8])|[13]9[09]|4(?:0[05]|1[09]|2[2-47-9])|7(?:1[0-29]|5[0-69])|8(?:0[4-79]|[12][0-278]|4[013-69]|5[0-46-8]|6[1-5]|7[014-79]|8[47-9])|9(?:0[03-9]|1[013-9]|7[0-37-9]|8[0-489]))|(?:0(?:51|72)|126|3(?:49|54|85))[1-9]|(?:106|3(?:14|88))[0-689]|(?:084|136|262|432)0|(?:060|151|417)[7-9]|(?:189|226|38[37]|476)[0-24-9]|472[014-7]|(?:112|400)[1-689]|(?:2(?:01|9[69])|305|492)[0-35-9]|(?:074|3[01]6|4(?:05|14))[0-46-9]|(?:162|394)[2-9]|188[0-47-9]|5(?:0(?:2[1-9]|[34][0-689]|80|9[7-9])|1(?:0[0-24-9]|4[014-7]|6[1-689]|9[0-35-9])|2(?:2[0-46-9]|4[013-6]|5[2-9]|6[0-47-9]|8[024-9]))|(?:2(?:32|95)|3(?:04|23)|415)[0-79]|(?:0(?:1[89]|2[019]|3[019]|4[023]|69|7[013]|89)|1(?:0[0-359]|23|4[34]|5[2389]|9[0-25-9])|2(?:0[34]|2[57-9]|3[01]|5[47]|9[2-47])|3(?:0[17-9]|1[078]|2[0-246-8]|3[013-578]|4[1-6]|5[1-357-9]|6[0347-9]|7[014578]|8[124]|9[0135689])|4(?:0[1-38]|1[23]|4[3-9]|7[03489]|8[39]|9[3-69])|5(?:0[015-7]|1[1-3578]|2[01379])|(?:09|4[56]|5[3-9])[0-9])[0-9]|6(?:07[0-79]|(?:0[0-689]|[1-4][0-9])[0-9]|5[0-5][0-9]))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.08 = 0.08 seconds
  * Elapsed CPU time:
     - User: 0.07
     - Sys: 0.00
  * CPU usage: 98%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 2
  * Maximum resident set size (RSS: memory) (kiB): 20628
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


dbcorrdb
^dbcorrdb__(?:POLR2A(?:phosphoS2__ENCSR000DYF_1__m(?:1[0-2]|[2-9])|__ENCSR000AOJ_1__m(?:1[0-2]|[2-9]))|POLR2A(?:phosphoS2__ENCSR000DYF|__ENCSR000AOJ)_1__m1|(?:POLR2AphosphoS2__ENCSR000EHF|SETDB1__ENCSR000EWD|CHD1__ENCSR000EFC)_1__m[1-8]|(?:POLR(?:2A(?:phosphoS5__ENCSR000BOV|__ENCSR000ALT)|3G__ENCSR000EHQ)|POLR2AphosphoS2__ENCSR000EGF|S(?:MARCC2__ENCSR000EDL|IN3A__ENCSR000BOW)|TBL1XR1__ENCSR000EGA|ARID3A__ENCSR000EFY|(?:POLR2A__ENCSR000EU|ATF3__ENCSR000BN)U|ZNF384__ENCSR000DYP|STAT3__ENCSR000DZV|E(?:P300__ENCSR000(?:B(?:HB|LM|MA|PW)|DZD)|ZH2__ENCSR000A(?:R[EKR]|SW|TA))|HDAC(?:1__ENCSR000AQF|2__ENCSR000AQG)|(?:SAP30__ENCSR000AQ|HDAC6__ENCSR000AT)J|IKZF1__ENCSR000EUJ|NANOG__ENCSR000BMT|BRF2__ENCSR000DNV|CHD1__ENCSR000(?:AQD|EBU)|MXI1__ENCSR000EIA|RFX5__ENCSR000ECF|IRF3__ENCSR000DZX|TBP__ENCSR000ECB)_1__m[1-4]|(?:(?:POLR2AphosphoS2__ENCSR000ED|SIX5__ENCSR000BG)X|PPARGC1A__ENCSR000EEQ|Z(?:C3H11A__ENCSR000EFR|NF(?:143__ENCSR000DZL|274__ENCSR000EWE))|(?:SUPT20H__ENCSR000DN|ZNF(?:143__ENCSR000EG|384__ENCSR000EF))P|POLR2A__ENCSR000E(?:FB|ZQ)|POLR2A__ENCSR000AKZ|S(?:R(?:EBF1__ENCSR000EEO|F__ENCSR000BGE)|TAT(?:5A__ENCSR000BQZ|1__ENCSR000FAV|2__ENCSR000FBC|3__ENCSR000DO[UX])|I(?:N3A__ENCSR000(?:BOY|EBO)|X5__ENCSR000B(?:IQ|JE)))|T(?:CF7L2__ENCSR000E(?:UV|WT)|AF1__ENCSR000BPF|BP__ENCSR000EDD)|(?:POLR3(?:A__ENCSR000DN|G__ENCSR000EY)|FOXM1__ENCSR000BR|TAF7__ENCSR000BL)U|NFATC1__ENCSR000BQL|(?:ZNF143__ENCSR000EB|RFX5__ENCSR000DZ)W|G(?:TF2F1__ENCSR000EBP|ATA2__ENCSR000EVW)|MYBL2__ENCSR000BRO|C(?:EBPB__ENCSR000BRX|TCF__ENCSR000D(?:LW|TI|UU))|E(?:P300__ENCSR000(?:DZ[GT]|E[DH]V)|LK4__ENCSR000EVB|TS1__ENCSR000B(?:KQ|PU)|ZH2__ENCSR000ASZ)|HCFC1__ENCSR000ECH|R(?:AD21__ENCSR000BLY|E(?:LA__ENCSR000E(?:AW|B[AI])|ST__ENCSR000B(?:MN|QS)))|(?:SIN3A__ENCSR000BL|HDAC2__ENCSR000BN|MXI1__ENCSR000EB|PBX3__ENCSR000BG)R|M(?:AFK__ENCSR000EEB|YC__ENCSR000D(?:LI|OM))|ATF3__ENCSR000B(?:JY|KC)|BDP1__ENCSR000DNX|MAFK__ENCSR000DYV|(?:MTA3__ENCSR000BR|JUN__ENCSR000EG)H)_1__m[1-3]|(?:P(?:OLR2A(?:phosphoS5__ENCSR000B(?:IC|PL)|__ENCSR000(?:BHZ|D(?:K[MT]|L[MQV]|MZ)|E(?:EM|FK|HL|XO|Z[AL])|FA[JWY]))|AX5__ENCSR000BHJ)|(?:POLR2AphosphoS2__ENCSR000DZ|S(?:TAT1__ENCSR000EZ|P1__ENCSR000BH)|BDP1__ENCSR000DO)K|(?:POLR2AphosphoS2__ENCSR000EC|STAT2__ENCSR000FA|TCF12__ENCSR000BI|CHD2__ENCSR000EB|ELF1__ENCSR000BP)T|(?:POLR2AphosphoS5__ENCSR000BQ|STAT3__ENCSR000ED|RAD21__ENCSR000EA)C|T(?:BL1XR1__ENCSR000EGB|CF7L2__ENCSR000E(?:UY|VF)|EAD4__ENCSR000BRY|AF1__ENCSR000BH[OT])|(?:S(?:MARCA4__ENCSR000EH|P1__ENCSR000BK)|POLR2A__ENCSR000DY)O|Z(?:KSCAN1__ENCSR000ECJ|NF(?:143__ENCSR000ECO|217__ENCSR000EWU)|MIZ1__ENCSR000EFQ)|A(?:RID3A__ENCSR000EDP|TF(?:1__ENCSR000DNZ|2__ENCSR000BQU|3__ENCSR000BKE))|(?:POLR2A__ENCSR000BQ|S(?:IN3A__ENCSR000B|TAT3__ENCSR000D)P)B|(?:POLR2A__ENCSR000DN|HNF4A__ENCSR000BL|YY1__ENCSR000EW)F|(?:STAT5A__ENCSR000BR|E2F4__ENCSR000DO)R|(?:POU5F1__ENCSR000BM|HNF4A__ENCSR000EE|CTCF__ENCSR000AQ|ELK1__ENCSR000EF|RXRA__ENCSR000BH)U|(?:POLR2A__ENCSR000EY|MBD4__ENCSR000BQ|BRF1__ENCSR000DN)W|G(?:TF2F1__ENCSR000EHC|A(?:BPA__ENCSR000BIW|TA(?:1__ENCSR000EFT|3__ENCSR000EW[SV])))|(?:TCF7L2__ENCSR000EX|SI(?:N3A__ENCSR000BG|X5__ENCSR000BR)|E2F4__ENCSR000EV)L|(?:BCL11A__ENCSR000BH|JUN__ENCSR000EC)A|S(?:TAT3__ENCSR000DOQ|RF__ENCSR000BLV)|(?:TCF12__ENCSR000BJ|SP2__ENCSR000BQ)G|E(?:P300__ENCSR000(?:BKK|EGY)|ZH2__ENCSR000ARO)|H(?:DAC2__ENCSR000BMC|MGN3__ENCSR000DOB)|(?:FOXA1__ENCSR000BP|SP1__ENCSR000BJ)X|THAP1__ENCSR000BNN|(?:SIRT6__ENCSR000DO|PHF8__ENCSR000AQ|BCL3__ENCSR000BQ)H|(?:FOSL1__ENCSR000BN|JUND__ENCSR000DY|TAF1__ENCSR000B[GK])S|(?:MEF2A__ENCSR000BN|CEBPB__ENCSR000EB)V|N(?:R(?:2(?:C2__ENCSR000EWH|F2__ENCSR000BRS)|3C1__ENCSR000(?:B(?:HG|JC)|EEV))|F(?:E2__ENCSR000FAF|IC__ENCSR000B(?:QX|RN)|Y(?:A__ENCSR000(?:DNS|EGR)|B__ENCSR000DN[MR])))|(?:CEBPB__ENCSR000EF|YY1__ENCSR000EU)M|R(?:AD21__ENCSR000E[CD]E|BBP5__ENCSR000AQI|E(?:LA__ENCSR000E(?:A[GINQ]|BM)|ST__ENCSR000B(?:HM|J[LOP]|OT))|FX5__ENCSR000ECX)|(?:TCF12__ENCSR000BQ|RCOR1__ENCSR000ED|BCL3__ENCSR000BN)Q|(?:HNF4G__ENCSR000BN|BRF1__ENCSR000DO|E2F6__ENCSR000EW)J|KDM5(?:A__ENCSR000AQL|B__ENCSR000AQA)|(?:JUND__ENCSR000EB|MAFK__ENCSR000ED|FOS__ENCSR000EY|TBP__ENCSR000DZ)Z|JUND__ENCSR000BKP|CTCF__ENCSR000(?:A(?:LJ|MA|N[ES]|OO|PF)|BHW|D(?:L[DK]|P[MPSY]|Q[IW]|S[UZ]|T[FLW]|U[GP]|VA|W[QY]|X[DQW])|EFI)|IRF1__ENCSR000EG[KU]|(?:MXI1__ENCSR000EF|CHD1__ENCSR000DZ)E|JUN__ENCSR000E(?:FS|Z[TWX])|YY1__ENCSR000EXG|FOS__ENCSR000FAI)_1__m[12]|(?:P(?:OLR2A(?:phosphoS5__ENCSR000B(?:I[AFL]|OA|P[AI])|__ENCSR000(?:B(?:G[DO]|H[HIN])|D(?:L[JY]|M[KNT]|P[AC])|E(?:A[DJMRUY]|B[CGK]|EP|HP|XX)|FA[LX]))|AX5__ENCSR000B(?:HD|J[HI])|ML__ENCSR000BQ[MY])|(?:POLR2AphosphoS5__ENCSR000BM|E2F4__ENCSR000EW|MAZ__ENCSR000EC|SP2__ENCSR000BN)L|(?:POLR2A(?:phosphoS5__ENCSR000BK|__ENCSR000BM)|CHD2__ENCSR000DZ|MYC__ENCSR000EH|SP1__ENCSR000BI)R|(?:BHLHE40__ENCSR000D[YZ]|C(?:EBPD__ENCSR000BQ|TCF__ENCSR000BP)|SPI1__ENCSR000BI|E2F1__ENCSR000EV|IRF3__ENCSR000EE|NRF1__ENCSR000ED)J|(?:B(?:HLHE40__ENCSR000ED|ATF__ENCSR000BG)|TCF3__ENCSR000BQ)T|(?:BHLHE40__ENCSR000EG|FOSL1__ENCSR000BM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__ENCSR000EAA_1__m[1-3]|(?:GTF3C2__ENCSR000DN|E(?:2F4__ENCSR000DY|SR1__ENCSR000BI))Y_1__m[12]|(?:ZBTB7A__ENCSR000BQ|C(?:CNT2__ENCSR000DO|EBPB__ENCSR000ED)|EGR1__ENCSR000BJ|RFX5__ENCSR000EE|MAZ__ENCSR000DZ)A_1__m1|E(?:ZH2__ENCSR000AQE_1__m(?:10|[2-9])|P300__ENCSR000AQB_1__m[1-8])|KAT2A__ENCSR000DNO_1__m[1-9]|EZH2__ENCSR000AQE_1__m1|CTCF__ENCSR000DR[FH-L]_[12]__m1)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:01.97 = 1.97 seconds
  * Elapsed CPU time:
     - User: 1.75
     - Sys: 0.21
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 2
  * Maximum resident set size (RSS: memory) (kiB): 895680
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 16
  * Exit status: 0


elemento
^elemento__(?:A(?:TTTGCATA|A(?:(?:CCGG|ATA)|TTAA)TT|CTTCCG)|A(?:A(?:[AG]ATGGC|CAGCT)|C(?:CTGT|A(?:GG|TA))T)G|(?:(?:AATTATG|CA(?:TGCG|ACAA))C|(?:A(?:TCAA|GCTG)|C(?:AAG|CAC)G)TC|CTAATT|(?:A(?:CCGG|TGCA)|C(?:CCGG|TGTC))A)A|CGGAAGTGA|(?:C(?:GCATGCG|ACGTGA)|A(?:AGGTCA|TGGCGG))C|CCCTCCCCC|(?:A(?:ATTTAT|GGGG)G|C(?:G(?:C(?:C(?:TGCG|C[AC])|AGGCG)|TCAT)|(?:AGCT|CCAC)G)|AC(?:TTCCT|GTG[ACG])|ATGACGT|ATCTTAT|ACGCCCA|T(?:TGTTT|G(?:GCA|TTT))A)C|GCC(?:ACGCCC?|CCGCCC)|ATTTGCAT|C(?:GCATGCG|ACGTGA)|CCCTCCCC|C(?:A(?:GGTGAG|CGTG[CG])|C(?:AATC|GGA)AG)|T(?:(?:GAC(?:[AG])?TC|AATTA)|CTCGCG)A|(?:C(?:C(?:TCCT|CGC)|A(?:(?:CGC|TGA)|CTT))|TT?GGCG)CC|CC(?:CCT|GC)CCC|A(?:AGGTCA|TGGCGG)|AGATAAG)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Elapsed CPU time:
     - User: 0.01
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 7436
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


factorbook
^factorbook__(?:Z(?:NF(?:143\-ext|2(?:63|81))|EB1)|(?:SOX2\-OCT|ELK)4|(?:GATA1|C(?:REB|TCF))\-ext|B(?:HLHE40|ARHL2|\-Box)|ZNF143|(?:(?:SR)?EBF|NR(?:3C|F)|P(?:RDM|U)|T(?:EAD|AL)|MEIS|RUNX|NFKB|E(?:GR|LF|TS)|GFI|HSF|SP|YY)1|(?:POU2F|N(?:R2C|FE)|TCF1|MEF)2|TCF7L2|GATA1|S(?:TAT[12]|RF)|CEBPB|GA(?:TA3|BP)|(?:ESRR|FOX)A|A\-Box|v\-(?:JUN|Maf)|SOX2|C(?:REB|TCF)|M(?:Y(?:OG|C)|AX)|U(?:A(?:1[0-2]|[2-9])|SF)|E(?:2F[14]|SR1)|HNF4|PAX5|R(?:EST|FX5|XRA)|UA1|NFY|AP[12]|TBP)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Elapsed CPU time:
     - User: 0.01
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 5592
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


flyfactorsurvey
^flyfactorsurvey__(?:(?:CG(?:4360(?:_F1\-3_SANGER_2\.5|\-F1\-3_SOLEXA)_FBgn003878|33557_da_SANGER_5_FBgn005355)|g(?:ce_Clk_SANGER_5_FBgn003062|sb\-n_SOLEXA_5_FBgn000114)|salr\-F3\-5_SOLEXA_FBgn000028|(?:Eip74EF_(?:SANGER_5|FlyReg)_FBgn00005|slp2_SANGER_5_FBgn00045)6|(?:Fer3_da_SANGER_5_FBgn00379|SuH_FlyReg_FBgn00048)3|a(?:se_da_SANGER_10_FBgn000013|op_SANGER_10_FBgn000009)|(?:foxo_SANGER_10_FBgn00381|phol_S(?:ANGER|OLEXA)_5_FBgn00359)9|srp_(?:SANGER_5|FlyReg)_FBgn000350|pnr_SANGER_5_FBgn000311|Dll_(?:SOLEXA|Cell)_FBgn000015|R(?:o_(?:SOLEXA|Cell)_FBgn000326|x_(?:SOLEXA|Cell)_FBgn002061))7|(?:(?:CG3065_F1\-(?:3_S(?:ANGER|OLEXA)|5_SOLEXA)_2\.5_FBgn00349|E5_(?:SOLEXA|Cell)_FBgn00086)4|(?:(?:shn\-F1\-2_S(?:ANGER_5|OLEXA)_FBgn0003|CrebA_SANGER_5_FBgn0004)3|onecut_(?:SOLEXA|Cell)_FBgn00289)9|(?:Cf2\-(?:P(?:A_S(?:ANGER_2\.5|OLEXA)_FBgn00002|B_S(?:ANGER_5|OLEXA)_FBgn00002)|II_FlyReg_FBgn00002)|cic_SANGER_5_FBgn00283)8|C(?:lk_cyc_SANGER_5_FBgn002307|G7745_SANGER_5_FBgn003361)|(?:CG12361_(?:SOLEXA_(?:2_)?FBgn02507|Cell_FBgn02507)|Doc2_SANGER_5_FBgn00359)5|tgo_sim_SANGER_5_FBgn000466|(?:(?:gce|tai)|Met)_Clk_SANGER_5_FBgn002307|ken_S(?:ANGER_10|OLEXA_5)_FBgn001123|tup_SOLEXA_10_FBgn000389|EcR_SANGER_5_FBgn000054|H(?:r4_SANGER_5_FBgn002354|bn_(?:SOLEXA|Cell)_FBgn000863)|v(?:ri_SANGER_5_FBgn001607|nd_FlyReg_FBgn000398)|Exex_(?:SOLEXA|Cell)_FBgn004115|bcd_FlyReg_FBgn000016|Bcd_SOLEXA_FBgn000016|Tup_(?:SOLEXA|Cell)_FBgn000389|Eve_(?:SOLEXA|Cell)_FBgn000060|eve_FlyReg_FBgn000060|Vnd_(?:SOLEXA|Cell)_FBgn000398|(?:Ems_(?:SOLEXA|Cell)_FBgn00005|ems_FlyReg_FBgn00005|Ind_Cell_FBgn00257)7|sens2_SOLEXA_F4\-)6|(?:Blimp\-1(?:\-F1\-CG4360F2\-3_SOLEXA_2\.|_(?:S(?:ANGER_5|OLEXA)_FBgn003562|NAR_FBgn003562))|H(?:LHmgamma_SANGER_(?:5_2|10)_FBgn000273|th_(?:SOLEXA|Cell)_FBgn000123)|Fer1_(?:da_SANGER_10|SANGER_5)_FBgn003747|CG(?:31670_S(?:OLEXA|ANGER)_5_FBgn00313|4136_(?:SOLEXA|Cell)_FBgn00297)7|CG16899_SANGER_5_FBgn003773|M(?:ax_Mnt_SANGER_5_FBgn002321|ed_FlyReg_FBgn001165)|(?:(?:(?:(?:herF1\-ZifF1_herF34|Sug_F3\-5\-2|s(?:na_F2\-4|ob\-F1\-3))|sob\-F3\-5)|ci_F3\-5)|lmd\-F3\-5)_SOLEXA_|Eip78C_SANGER_5_FBgn000486|(?:Ets96B_SANGER_5_FBgn00392|Kr_(?:S(?:ANGER_5|OLEXA)_FBgn00013|(?:FlyReg|NAR)_FBgn00013))2|fd64A_SANGER_5_FBgn000489|luna_S(?:ANGER|OLEXA)_5_FBgn004076|(?:retn_SANGER_5_FBgn00047|Antp_(?:(?:FlyReg|Cell)|SOLEXA)_FBgn00000)9|her_S(?:OLEXA|ANGER)_10_FBgn000118|(?:prd_(?:SOLEXA_5|(?:FlyReg|NAR))_FBgn00031|sd_FlyReg_FBgn00033)4|hth_SOLEXA_2_FBgn000123|Abd(?:\-B_FlyReg|B_(?:SOLEXA|Cell))_FBgn000001|odd_N(?:BT_(?:[12]\.)?5_FBgn000298|AR_FBgn000298)|CG8319\-F3\-5\-SOLEXA_|jim_F1\-4_SOLEXA_2\.)5|(?:(?:disco\-r\-(?:Cl1_SANGER_5|F1\-2_SOLEXA)_FBgn00426|gt_(?:FlyReg|NAR)_FBgn00011)5|(?:l_3_neo38_S(?:OLEXA|ANGER)_2\.5_FBgn00869|CG9895_S(?:ANGER_10|OLEXA_5)_FBgn00348|Ets97D_SANGER_10_FBgn00045|Atf6_SANGER_5_FBgn00330)1|Mio_bigmax_SANGER_5_FBgn003294|(?:Crc_CG6272_SANGER_5_FBgn00003|sc_da_SANGER_10_FBgn00041|H2\.0_(?:SOLEXA|Cell)_FBgn00011)7|HLH54F_da_SANGER_5_FBgn002274|t(?:ap_da_SANGER_5_(?:2_)?FBgn001555|wi_(?:da_SANGER_5|FlyReg)_FBgn000390|ll_(?:FlyReg|NAR)_FBgn000372|oy_FlyReg_FBgn001965)|amos_da_SANGER_10_FBgn000327|(?:CG13424_(?:SOLEXA_(?:2_)?FBgn00345|Cell_FBgn00345)|Atf\-2_SANGER_5_FBgn00504|kni_(?:SANGER_5|(?:FlyReg|NAR))_FBgn00013)2|(?:Ets21c_SANGER_5_FBgn00056|Optix_(?:SOLEXA|Cell)_FBgn00253|So_(?:SOLEXA|Cell)_FBgn00034)6|(?:Poxn_SOLEXA_5_FBgn00031|slp1_NAR_FBgn00034)3|run_Bgb_NBT_FBgn000330|eg_SANGER_5_FBgn000056|Tin_(?:SOLEXA|Cell)_FBgn000411)0|Xrp1_CG6272_SANGER_5_FBgn0(?:036126|261113)|(?:HLH4C_(?:da_SANGER_5_(?:[34]_)?FBgn00112|SANGER_5_FBgn00112)|ftz_FlyReg_FBgn00010|Ftz_(?:SOLEXA|Cell)_FBgn00010)77|(?:CG33980_(?:SOLEXA_(?:2_1?0_FBgn00539|FBgn00539)|Cell_FBgn00539)|scrt_S(?:OLEXA_2\.5_[12]_FBgn00048|ANGER_2\.5_FBgn00048)|hb_(?:S(?:ANGER_2\.|OLEXA_)5_FBgn00011|(?:FlyReg|NAR)_FBgn00011))80|(?:(?:jim_(?:F1\-9_SOLEXA|SANGER)_2\.5_FBgn00273|lmd_S(?:ANGER|OLEXA)_5_FBgn00390|Dfd_(?:(?:FlyReg|Cell)|SOLEXA)_FBgn00004|Scr_(?:SOLEXA|Cell)_FBgn00033)3|(?:crol(?:_F7\-16_SANGER_5|\-F7\-16_SOLEXA)_FBgn00203|H(?:and_da_SANGER_5_FBgn00322|LHm3_SANGER_5_FBgn00026)|dpn_SANGER_10_FBgn00101)0|Mio_bigmax_SANGER_5_FBgn003950|(?:cato_da_SANGER_10_FBgn00242|dei_da_SANGER_5_FBgn00086|ERR_SANGER_5_FBgn00358|Achi_(?:SOLEXA|Cell)_FBgn00337)4|CG7368_S(?:OLEXA_2\.|ANGER_)5_FBgn003617|Ets98B_SANGER_10_FBgn000565|Bt(?:eb2_S(?:ANGER|OLEXA)_2\.5_FBgn002567|n_(?:SOLEXA|Cell)_FBgn001494)|(?:disco_S(?:ANGER|OLEXA)_5_FBgn00004|bin_(?:SANGER_5|FlyReg)_FBgn00457|Ci_SANGER_5_FBgn00048|ci_SOLEXA_FBgn00048)5|(?:Poxm_SOLEXA_5_FBgn00031|Bsh_(?:SOLEXA|Cell)_FBgn00005)2|Hr(?:39_SANGER_5_FBgn001022|78_SANGER_5_FBgn001523)|Pph13_SOLEXA_FBgn002348|(?:Deaf1_FlyReg_FBgn00137|Her_SANGER_5_FBgn00308|sr_S(?:ANGER|OLEXA)_5_FBgn00034)9|Caup_(?:SOLEXA|Cell)_FBgn001591|Ap_(?:SOLEXA|Cell)_FBgn000009|ap_FlyReg_FBgn000009|fkh_NAR_FBgn000065)9|(?:H(?:LH(?:mdelta_SANGER_10_FBgn000273|106_SANGER_(?:5_[1-3]_FBgn001523|10_FBgn001523))|nf4_SANGER_(?:10|5)_FBgn000491)|(?:tgo_(?:(?:sima_SANGER_5_FBgn001|(?:s(?:im|s)_SANGER_5_FBgn001|cyc_SANGER_5_FBgn001))50|t(?:ai|rh)_SANGER_5_FBgn00150)|(?:(?:dys_tgo_SANGER_5|ss_tgo_SANGER_10)_FBgn0015|Abd(?:\-A_FlyReg|A_(?:SOLEXA|Cell))_FBgn0000)0)1|C(?:lk_cyc_SANGER_5_FBgn002309|G4328_(?:SOLEXA|Cell)_FBgn003627)|tgo_cyc_SANGER_5_FBgn002309|CG17181_S(?:ANGER|OLEXA)_5_FBgn003514|(?:pdm2_SOLEXA_5_FBgn00043|crp_SANGER_10_FBgn00019|Aef1_(?:S(?:ANGER_5|OLEXA)_FBgn00056|FlyReg_FBgn00056))9|Six4_(?:SOLEXA_(?:2_)?FBgn00273|Cell_FBgn00273)6|(?:dsx\-[FM]_FlyReg_FBgn00005|hkb_NAR_FBgn00012)0|nub_(?:SOLEXA_5|(?:FlyReg|NAR))_FBgn008542|usp_SANGER_5_FBgn000396|PhdP_SOLEXA_FBgn002533|U(?:nc4_(?:SOLEXA|Cell)_FBgn002418|bx_(?:(?:FlyReg|Cell)|SOLEXA)_FBgn000394)|tj_SANGER_5_FBgn000096|Ara_(?:SOLEXA|Cell)_FBgn001590|Otp_(?:SOLEXA|Cell)_FBgn001552|(?:l_3_neo38|(?:(?:her|rn)|klu))_SOLEXA_F2\-)4|Crc_CG6272_SANGER_5_FBgn0036126|(?:peb\-F(?:1\-3_S(?:ANGER_2\.5|OLEXA)|5\-7_SOLEXA)_FBgn000305|(?:HLHm(?:beta_SANGER_10_FBgn00027|7_SANGER_5_FBgn00026)|CG15696_(?:SOLEXA|Cell)_FBgn00388|btd_NAR_FBgn00002)3|C(?:G3(?:407_S(?:ANGER|OLEXA)_2\.5_FBgn003157|1670_SOLEXA_F1\-)|15_(?:SOLEXA|Cell)_FBgn000486)|ato_da_SANGER_(?:5_[23]_FBgn001043|10_FBgn001043)|M(?:et_(?:Clk_)?SANGER_5_FBgn000272|irr_(?:SOLEXA|Cell)_FBgn001434)|sens_S(?:ANGER_10|OLEXA_5)_FBgn000257|(?:G(?:ATAd_SANGER_5_FBgn00322|sc_(?:SOLEXA|Cell)_FBgn00103)|knrl_SANGER_5_FBgn00013|Lim3_(?:SOLEXA|Cell)_FBgn00020)2|wor_S(?:ANGER|OLEXA)_2\.5_FBgn000198|bowl_S(?:ANGER_5|OLEXA)_FBgn000489|run_Bgb_NBT_FBgn001375|Zen_(?:SOLEXA|Cell)_FBgn000405|byn_FlyReg_FBgn001172|(?:sens|(?:Sqz|pho))_SOLEXA_F1\-)3|(?:(?:(?:CG33557_da_SANGER_5_FBgn000|H(?:LH(?:4C_da_SANGER_5_(?:[34]_)?FBgn000|54F_da_SANGER_5_FBgn000)|and_da_SANGER_5_FBgn000)|(?:cato_da_SANGER_10|sage_da_SANGER_5)_FBgn000|Oli_da_SANGER_5_[1-3]_FBgn000|tap_da_SANGER_5_(?:2_)?FBgn000|Fer(?:(?:1_da_SANGER_10|2_da_SANGER_5)|3_da_SANGER_5)_FBgn000|d(?:imm_da_SANGER_5|a_SANGER_10)_FBgn000)0|(?:(?:l_1_sc_da_SANGER_5|sc_da_SANGER_10)|dei_da_SANGER_5)_FBgn0000|n(?:et_da_SANGER_10|au_da_SANGER_5)_FBgn0000|twi_da_SANGER_5_FBgn0000)4|a(?:(?:to_da_SANGER_(?:5_[23]_FBgn0000|10_FBgn0000)|(?:se_da_SANGER_10|c_da_SANGER_5)_FBgn0000)|mos_da_SANGER_10_FBgn0000)4|ss_tgo_SANGER_10_FBgn00035|tgo_ss_SANGER_5_FBgn00035|Sox15_SANGER_5_FBgn00056)13|(?:l_1_sc_da_SANGER_5_FBgn000256|(?:Oli_da_SANGER_5_[1-3]_FBgn0032|svp_SANGER_5_FBgn0003)65|(?:CG12605_S(?:ANGER_10|OLEXA_5)_FBgn00354|dsf_SANGER_5_FBgn00153|Pb_(?:SOLEXA|Cell)_FBgn00514)8|(?:dimm_da_SANGER_5_FBgn00230|E_spl__SANGER_5_FBgn00005)9|(?:net_da_SANGER_10_FBgn00029|CG34031_SOLEXA_FBgn00540)3|(?:(?:dys_tgo_SANGER_5_FBgn0039|D_NAR_FBgn0000)4|lim_SOLEXA_2_FBgn00264|Usf_SANGER_5_FBgn00297|Lim1_(?:SOLEXA|Cell)_FBgn00264|grh_FlyReg_FBgn02592)1|e(?:sg(?:\-F3\-5_SOLEXA|_SANGER_2\.5)_FBgn000198|xd_(?:SOLEXA_2|FlyReg)_FBgn000061)|GATAe_SANGER_5_FBgn003839|HLHm5_SANGER_5_FBgn000263|S(?:ide_SANGER_5_FBgn003274|lou_(?:SOLEXA|Cell)_FBgn000294)|Repo_(?:SOLEXA|Cell)_FBgn001170|sv_SOLEXA_5_FBgn000556|Unpg_(?:SOLEXA|Cell)_FBgn001556|(?:Awh_(?:SOLEXA|Cell)_FBgn00137|cad_FlyReg_FBgn00002|Cad_(?:SOLEXA|Cell)_FBgn00002)5|Lbl_(?:SOLEXA|Cell)_FBgn000865|Exd_(?:SOLEXA|Cell)_FBgn000061|Al_(?:SOLEXA|Cell)_FBgn000006)1|(?:(?:sens(?:\-2_SANGER_2\.5|2_SOLEXA)_FBgn00516|pan_FlyReg_FBgn00854)3|t(?:go_(?:sima_SANGER_5_FBgn001554|tai_SANGER_5_FBgn004109)|ai_Clk_SANGER_5_FBgn004109)|(?:sage_da_SANGER_5_FBgn00376|rn_S(?:ANGER_10|OLEXA_5)_FBgn02591)7|dm_Max_SANGER_10_FBgn000047|Fer2_da_SANGER_5_FBgn003840|(?:Sox14_SANGER_10_FBgn00056|Hr51_SANGER_5_FBgn00340|Ptx1_(?:SOLEXA|Cell)_FBgn00209)1|CG(?:32532_(?:SOLEXA|Cell)_FBgn005253|11617_(?:SOLEXA|Cell)_FBgn003123|7056_(?:SOLEXA|Cell)_FBgn003885)|(?:CG18599_(?:SOLEXA|Cell)_FBgn00385|sob_S(?:ANGER_10|OLEXA_5)_FBgn00048|Dr_(?:SOLEXA|Cell)_FBgn00004)9|Mitf_SANGER_5_FBgn026311|sug_S(?:ANGER|OLEXA)_5_FBgn003378|(?:O(?:pa_SANGER_5_FBgn00030|c_(?:SOLEXA|Cell)_FBgn00041)|opa_(?:SOLEXA|NAR)_FBgn00030)0|Bap_(?:SOLEXA|Cell)_FBgn000486|dl_(?:FlyReg|NBT)_FBgn000046)2|(?:CG8319_SOLEXA_2\.5_FBgn00377|nau_(?:da_)?SANGER_5_FBgn00029|Hsf_FlyReg_FBgn00012|Lab_(?:SOLEXA|Cell)_FBgn00025)22|CG(?:2052_S(?:ANGER|OLEXA)_2\.5_FBgn00399|32105_(?:SOLEXA|Cell)_FBgn00521)05|(?:CG12029_S(?:ANGER_10|OLEXA_5)_FBgn00354|BH2_(?:SOLEXA|Cell)_FBgn00048)54|kay_Jra_SANGER_5_FBgn000129[17]|(?:(?:Eip93F_SANGER_10_FBgn00139|sna_(?:S(?:ANGER_10|OLEXA_5)_FBgn0003|FlyReg_FBgn0003)4|H(?:r46_(?:SANGER_5|FlyReg)_FBgn00004|mx_(?:SOLEXA|Cell)_FBgn00854)|gsb_SOLEXA_5_FBgn00011|Vis_(?:SOLEXA|Cell)_FBgn00337)4|dm_Max_SANGER_10_FBgn001757|Ma(?:x_Mnt_SANGER_5_FBgn001757|d_FlyReg_FBgn001164)|Eip75B_SANGER_5_FBgn000056|(?:ftz\-f1_(?:SANGER_5|FlyReg)_FBgn00010|Sp1_S(?:OLEXA_2\.|ANGER_)5_FBgn00203|Lbe_(?:SOLEXA|Cell)_FBgn00112)7|C(?:G11085_(?:SOLEXA|Cell)_FBgn003040|t_(?:SOLEXA|Cell)_FBgn000419)|(?:slbo_SANGER_5_FBgn00056|cwo_SANGER_5_FBgn02599)3|pdm3_SOLEXA_5_FBgn003328|acj6_SOLEXA_5_FBgn000002|(?:sqz_S(?:ANGER|OLEXA)_5_FBgn00107|h_(?:SANGER_5|NAR)_FBgn00011)6|Hey_SANGER_5_FBgn002778|(?:pnt_SANGER_5_FBgn00031|Rel_SANGER_5_FBgn00140|Hgtx_(?:SOLEXA|Cell)_FBgn00403)1|ovo_(?:S(?:ANGER|OLEXA)_5_FBgn0003|FlyReg_FBgn0003)02|Lag1_(?:SOLEXA|Cell)_FBgn004091)8|(?:Ets65A_SANGER_10_FBgn00056|CG11294_(?:SOLEXA|Cell)_FBgn00300|Odsh_(?:SOLEXA|Cell)_FBgn00260|BH1_(?:SOLEXA|Cell)_FBgn00117)58|(?:CG5669_S(?:ANGER_10|OLEXA_5)_FBgn00391|klu_S(?:ANGER_10|OLEXA_5)_FBgn00134)69|ac_da_SANGER_5_FBgn0000022|(?:pho_(?:S(?:ANGER_10|OLEXA_5)|FlyReg)_FBgn00025|CG9876_(?:SOLEXA|Cell)_FBgn00348)21|N(?:FAT_SANGER_5_FBgn0030505|K7\.1_(?:SOLEXA|Cell)_FBgn0024321)|zen2_SOLEXA_2_FBgn0004054|vvl_(?:SOLEXA_5|FlyReg)_FBgn0086680|inv_SOLEXA_[25]_FBgn0001269|e(?:n_(?:SOLEXA_2|FlyReg)_FBgn0000577|y_(?:SOLEXA_5|FlyReg)_FBgn0005558)|Zen2_(?:SOLEXA|Cell)_FBgn0004054|En_(?:SOLEXA|Cell)_FBgn0000577|Inv_Cell_FBgn0001269)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:11.83 = 11.83 seconds
  * Elapsed CPU time:
     - User: 10.46
     - Sys: 1.36
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 23
  * Maximum resident set size (RSS: memory) (kiB): 4917700
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 32
  * Exit status: 0


hdpi
^hdpi__(?:H(?:IST(?:1H2BN|2H2BE)|NRP(?:A[01]|C)|SPA5|2AF[YZ]|OXB9|1FX|H(?:AT|EX)|LCS)|(?:HIST2H2A|P(?:PP2R3|4H)|FAM1(?:19|27)|C(?:KMT1|SNK2)|MEF2|UQCR|ETF)B|R(?:NASEH2C|B(?:M(?:35[AB]|[79])|BP[59])|A(?:B1[48]|R[ABG]|[NX])|FX[34]|PL6)|(?:TIMELES|CYC)S|K(?:IAA0907|LF[34])|(?:FLJ3707|MAGEA|RNF13|DGCR|UTP1|HDAC)8|(?:C(?:1orf17|9orf15|CDC1|NOT)|THRAP|D(?:HX3|LX)|PSMA|MYF|LSM)6|(?:M(?:GC1043|SRB|EIS)|N(?:UP13|KX2\-|FIL|XPH)|PO(?:U4F|LE)|PIK3C|EXOSC|GTF2H|H(?:NRPH|OX(?:B1|D))|(?:H(?:IRI|P1B)|SSB|VAM)P|D(?:DX5|IS)|RUFY|T(?:MSL|CF|P7)|ING)3|(?:C19orf4|PPP1R1|SNRP7|TRIP1|DDX2|RPS1)0|(?:C(?:19orf|CDC)2|LOC5103|RP(?:S6KA|L3|P2)|P(?:DLIM|RDX)|MRPS2|THAP|HES)5|(?:M(?:GC1033|AGED)|(?:TSC22|MX)D|TIMM4|ZNF(?:30|12)|CPSF|FOXP|LASS|OTUD|BAT|AFF|IL2|ETV)4|B(?:RUNOL[4-6]|A[DX])|(?:T(?:GIF2L|SNA)|RPS4|CAN|SMP|ML)X|JARID1[AD]|(?:GADD45|BCL11|DNMT3|PHOX2|SEMA4|T(?:IMM8|AF1)|HMG20|R(?:AB[27]|BM8)|ESRR|RXR)A|(?:S(?:LC18A|UCLG|CMH|F3B|TUB|MUG|[NO]D)|(?:ASPSC|CYB5)R|(?:CREB3|DDEF|NMRA|PLAG|RUVB|TBP)L|(?:(?:(?:ARFG|CDK2)|DAZ)A|P(?:AXI|QB)|TUL)P|LRRFIP|M(?:A(?:GEF|PK)|OR[GN])|P(?:DCD1|ICK)|(?:ADAR|NUC)B|CENTG|(?:AKR1|COBR|NOL)A|T(?:RIM2|IA|PI)|UBE2V|NAP1L|F(?:IP1L|OXM|OSL|LI)|(?:PTP|TR)MT|(?:NANO|CHE)S|KCNIP|(?:M(?:THF|YO)|S(?:FT2|RB)|PTC|TEA)D|RBMS|(?:AGG|NR2|PHT|U2A)F|E(?:WSR|BF|DN|NO|SX|TS)|G(?:RHL|OT|PD)|H(?:CLS|SF)|(?:XR|AS)CC|(?:BAR|P(?:IT|RR)|EV)X|ACO|DR\-|NME|CLK|ODC|VSX)1|Z(?:C(?:CHC1[47]|3H7A)|DHHC1?5|NF(?:32[36]|2(?:0[57]|38|6)|7(?:66|06|1)|19[23]|313|(?:25|72|16)0|5(?:03|10))|BTB4[36]|(?:NF(?:38|6[59])|BTB2)5|(?:NF(?:13|67)|BED)1|SWIM1|MAT[24]|(?:FP|HX)3)|(?:S(?:C(?:C\-11|AND)|PATS|NRPB|TAU)|CBFA2T|P(?:K(?:NOX|M)|SMC)|(?:MAP4|PC)K|R(?:3HDM|BM2|IOK)|MBTPS|T(?:AGLN|ROVE|OB)|(?:POU3|ABC|CST|MYE)F|PHLDA|E(?:IF5A|LF)|Z(?:BTB1|RSR)|APEX|(?:PGA|MD)M|RKHD|FEZF|KIF2|HCFC|DAB|GIT|HIP|(?:CF|FH)L|V(?:AX|IL)|ID)2|(?:HTATI|M(?:CT|EC)|NCB|UG|JD)P2|A(?:NXA11|CF)|DIABLO|S(?:NAPC[45]|MAD[2-4]|F1|PR)|DUSP2[26]|T(?:CEAL[26]|F(?:A(?:P2[AC]|M)|E[3B])|GIF1|AF9|PPP)|(?:TRIM6|USP3|CD5|SRP)9|PRKRIR|(?:RFXAN|MYL)K|G(?:T(?:F(?:3C[25]|2B)|PBP[16])|LYCTK|RHPR|PAM)|(?:NFATC|SOX1)[34]|(?:NUP10|RBM1|SPAG|CBX)7|(?:SM(?:AP1|CR7)|H(?:SPA1|NRPL)|ARNT|D(?:US3|T)|NOC2|BOL)L|Y(?:EATS4|WHA[EZ])|ANXA1|Z(?:NF(?:76|3)|BTB4)|C(?:REB1|BFB|AT)|DDX43|CEBPG|MAGOH|P(?:DE6H|AX3|OLI|URG|IR|LG)|PPP5C|(?:NCAL|IV)D|EEF1D|F(?:GF19|EZ1)|(?:ECSI|NN)T|(?:M(?:RPL|SI)|NR4A|USF)[12]|L(?:A(?:RP[14]|S1L)|UZP[12])|OLIG[13]|VPS4B|INSM1|W(?:HSC|ISP)2|SOCS4|DDX4|RBM3|T(?:HRA|SN)|MSRA|N(?:FI[BX]|ONO|MI|RL)|PRNP|IRF[16]|AVEN|(?:RFC|SSX)[23]|LHX[24]|UBB|XG)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.12 = 0.12 seconds
  * Elapsed CPU time:
     - User: 0.12
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 3
  * Maximum resident set size (RSS: memory) (kiB): 42020
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


hocomoco
^hocomoco__(?:(?:(?:(?:(?:(?:(?:NR1D1_HUMAN\.H11MO\.0|FOXJ3_MOUSE\.H11MO\.1|(?:(?:(?:FOXJ3|MAF)|MEIS1)|NANOG)_HUMAN\.H11MO\.1|SOX10_HUMAN\.H11MO\.0|SOX10_MOUSE\.H11MO\.0|(?:(?:NR1H3|(?:N(?:R1H4|FAC1|KX61)|OLIG2|P(?:PAR|TF1)A|RFX1|MAFF))|SOX9)_HUMAN\.H11MO\.[01]|(?:TWST1|P[67]3|SP4)_MOUSE\.H11MO\.[01]|KAISO_MOUSE\.H11MO\.[0-2]|RARG_HUMAN\.H11MO\.[01]|ATF2_HUMAN\.H11MO\.[01]|COT2_MOUSE\.H11MO\.[12]|COT1_MOUSE\.H11MO\.0|BRAC_(?:HUMAN\.H11MO\.1|MOUSE\.H11MO\.0)|RXRG_MOUSE\.H11MO\.[01]|SP2_(?:HUMAN\.H11MO\.1|MOUSE\.H11MO\.0)|WT1_(?:HUMAN\.H11MO\.1|MOUSE\.H11MO\.0)|ZFX_MOUSE\.H11MO\.[01])|(?:(?:(?:(?:(?:(?:(?:(?:ATF6A|RXRG)|MZF1)|GLI3)|RFX3)_H|N(?:R6A1|FAC2)_H|(?:E(?:PAS1|RR3|2F7)|HNF4G|NFKB2)_H|(?:CEBPG|F(?:OXO3|EV)|M(?:EIS2|AFB|BD2)|NFAC3|S(?:R(?:BP2|Y)|MAD3|P3)|(?:ATOH|FOXI|EVI|STF)1|THA11|A(?:LX1|P2B|TF1|HR)|E(?:2F[25]|LK1|TV4|HF)|HXA9|DBP)_H|Z(?:N322|IC1)_H|SOX3_H|ARNT_H)|REL_H)|(?:B(?:ATF3|HA15)|FOXA3|N(?:R(?:2C|5A)2|KX25|DF2)|PKNX1|S(?:TAT6|ALL4|MAD4|OX4)|TF(?:7L1|E3)|Z(?:KSC1|IC3)|ETV2|H(?:NF6|XB4)|IRF[38]|MYOG|ETS2|CRX)_H)|KLF3_H)UMAN\.H11MO\.0)|(?:(?:(?:(?:(?:(?:(?:CEBPD|NKX32|RORG|ITF2)|PDX1)|TBX3)|PRD16)|ARNT)|(?:CEBPG|F(?:OXO3|EV)|M(?:EIS2|AFB|BD2)|NFAC3|S(?:R(?:BP2|Y)|MAD3|P3)|(?:ATOH|FOXI|EVI|STF)1|THA11|A(?:LX1|P2B|TF1|HR)|E(?:2F[25]|LK1|TV4|HF)|HXA9|DBP))_M|Z(?:(?:FP57|IC1)|N322)_M)OUSE\.H11MO\.0)|(?:N(?:R4A1|FYC)|PO2F2|SRBP1|ZBT7A|EL(?:F3|K4)|IRF2|KLF6)_MOUSE\.H11MO\.0)|(?:FOXM|ZEB)1_MOUSE\.H11MO\.0)|LEF1_MOUSE\.H11MO\.0)\.B|(?:NR1D1_MOUSE\.H11MO\.0|FOXJ3_MOUSE\.H11MO\.0|(?:(?:(?:FOXJ3|MAF)|MEIS1)|NANOG)_HUMAN\.H11MO\.0|SOX10_HUMAN\.H11MO\.1|SOX10_MOUSE\.H11MO\.1|(?:(?:(?:(?:(?:GATA2|PBX3)|(?:(?:RXRA|COT2)|PDX1))|TAL1)|(?:TWST1|P[67]3|SP4))|RFX5)_HUMAN\.H11MO\.[01]|(?:(?:(?:MEIS1|(?:ANDR|MAF))|NANOG)_M|P(?:RDM5|O3F2)_M|(?:N(?:R1H4|FAC1|KX61)|OLIG2|P(?:PAR|TF1)A|RFX1|MAFF)_M|SOX9_M)OUSE\.H11MO\.[01]|(?:G(?:ATA1|CR)|H(?:NF1B|SF1)|(?:M(?:YOD|XI)|FLI)1|P(?:O5F1|PARG|53)|S(?:TAT|P)1|RFX2|E(?:2F4|GR2|SR[12])|MA(?:F[GK]|Z)|NFIC|PRGR|VDR)_(?:HUMAN\.H11MO\.[01]|MOUSE\.H11MO\.[01])|Z(?:N(?:263_HUMAN\.H11MO\.[01]|335_(?:HUMAN\.H11MO\.[01]|MOUSE\.H11MO\.[01]))|FX_HUMAN\.H11MO\.[01])|(?:NR1H3|RXRA)_MOUSE\.H11MO\.[0-2]|KAISO_HUMAN\.H11MO\.[0-2]|RARA_MOUSE\.H11MO\.[0-3]|COT2_MOUSE\.H11MO\.0|PBX1_(?:HUMAN\.H11MO\.0|MOUSE\.H11MO\.[01])|BRAC_HUMAN\.H11MO\.0|(?:BATF|SOX2)_(?:HUMAN\.H11MO\.[01]|MOUSE\.H11MO\.[01])|(?:RARA|ANDR)_HUMAN\.H11MO\.[0-2]|SP2_HUMAN\.H11MO\.0|WT1_MOUSE\.H11MO\.1)\.A|(?:(?:(?:(?:(?:(?:(?:BACH1|PO3F2)|(?:BC11A|FOX[HP]1|HXB13|MEF2B|DUX4|ETV1|SIX1))|TFAP4)|ZN274)|(?:N(?:R4A1|FYC)|PO2F2|SRBP1|ZBT7A|EL(?:F3|K4)|IRF2|KLF6))|(?:FOXM|ZEB)1)|LEF1)_HUMAN\.H11MO\.0\.A|(?:(?:(?:(?:(?:(?:(?:(?:(?:(?:FOXP|ATF)2|HNF1A)|NKX22)|(?:NR1D2|CDX4))|SP7)|(?:GATA2|PBX3))|TAL1)|REL)|(?:B(?:ATF3|HA15)|FOXA3|N(?:R(?:2C|5A)2|KX25|DF2)|PKNX1|S(?:TAT6|ALL4|MAD4|OX4)|TF(?:7L1|E3)|Z(?:KSC1|IC3)|ETV2|H(?:NF6|XB4)|IRF[38]|MYOG|ETS2|CRX))|KLF3)_MOUSE\.H11MO\.0\.A|(?:R(?:UNX[1-3]|EST)|A(?:SCL1|P2[AC]|TF[34])|B(?:ACH2|HE40)|C(?:REB1|TCFL|EBP[ABE]|DX2)|FO(?:X(?:A[12]|O1)|SB)|G(?:FI1B|A(?:BPA|TA[346])|RHL2)|H(?:NF4A|SF2|TF4)|M(?:EF2[ACD]|YCN|ITF|AX)|N(?:F(?:KB1|Y[AB])|KX21|DF1)|P(?:RD(?:14|M1)|AX5)|NF2L2|S(?:TA(?:5[AB]|T[2-4])|MAD2|NAI2|PI[1B]|IX2|RF|UH)|T(?:B(?:X21|P)|EAD[14]|F(?:7L2|65|E2)|CF7)|(?:T(?:GIF|YY)|ISL)1|Z(?:FP42|N(?:143|281)|BT17)|KLF(?:15|[45])|(?:FOXK|COE|NRF|TAF)1|BMAL1|E(?:R(?:R[12]|G)|2F[136]|GR1|LF[15]|VX2)|IRF[14]|JUN[BD]|ETS1|OTX2|NFE2|L(?:HX2|YL1))_(?:HUMAN|MOUSE)\.H11MO\.0\.A|FOSL[12]_(?:HUMAN|MOUSE)\.H11MO\.0\.A|(?:NR1D1_HUMAN\.H11MO\.1|N(?:R1I[23]|FIA)_MOUSE\.H11MO\.1|(?:N(?:R1I[23]|FIA)_H|TH[AB]_H)UMAN\.H11MO\.1|HAND1_HUMAN\.H11MO\.[01]|Z(?:N(?:(?:350|418|394|554)|708)_HUMAN\.H11MO\.1|BTB4_HUMAN\.H11MO\.[01])|RARG_HUMAN\.H11MO\.2)\.D|(?:(?:(?:(?:(?:(?:(?:(?:(?:(?:(?:NR6A1|GLI3)|M(?:YF5|SX3))|SALL1)|THB)|(?:SOX17|TFDP1|ETV5))_M|ZBT(?:18|B6)_M)|(?:HXB1|TBX2)_M)|(?:A(?:RNT2|P2D|TF7)|B(?:ARX2|HE41)|CEBPZ|FOX(?:C2|D1|P3)|G(?:LI(?:S3|2)|ATA5)|H(?:X(?:D(?:1[03]|[49])|A[57]|B6|C[68])|LTF|E(?:S1|Y2))|CDC5L|M(?:LXPL|AFA|YBB|SX2|CR)|N(?:R(?:1H2|2F6|4A3)|FAT5)|O(?:NEC2|TX1)|ARI3A|P(?:ITX2|RRX1|O(?:4F2|6F1)|PARD|AX[238]|URA)|S(?:OX1[358]|MAD1)|T(?:E(?:AD3|F)|FCP2|BX5)|(?:FOXF|HMGA)[12]|Z(?:FHX3|N(?:148|423)|EP[12])|RARB|DLX2|E(?:GR[34]|LK3)|IRF5|GCM1)_M)|(?:BRCA|CXXC|HESX|RREB|NR0B|PLAG|E4F|SPZ|TLX)1_M)|(?:FU|H)BP1_M)|UBIP1_M)OUSE\.H11MO\.0\.D|(?:(?:(?:(?:(?:(?:(?:(?:NKX22_|(?:S(?:HOX|OX1)_|TBX1_|(?:(?:ML|R)X|GSC)_))|(?:B(?:CL6B|SH)|CREB[35]|E(?:OMES|2F8|TV[37])|FOX(?:D2|L1|O6)|G(?:LIS[12]|RHL1)|H(?:X(?:A(?:11|2)|C1[0-3]|D(?:1[12]|[38])|B[23])|OMEZ|E(?:S[57]|Y1)|IC2|MX[1-3]|SF4)|BHE2[23]|M(?:EIS3|YNN|GAP|SX1)|N(?:R(?:2E1|L)|KX(?:23|62)|OTO)|O(?:LIG[13]|NEC3)|CENPB|P(?:5F1B|ITX3|RDM4|O(?:2F3|3F[34]|4F[13]|6F2)|AX[147])|S(?:P(?:DEF|IC)|HOX2|OX(?:11|21|[78]))|T(?:BX(?:1[59]|4)|F2LX)|(?:BARH|CR3L|SCRT|GSX|HME)[12]|(?:MEO|EM|GB)X[12]|V(?:ENTX|AX[12]|SX1)|FIGLA|(?:T(?:GIF|YY)|ISL)2|(?:RHXF|CPEB|FOX[BG]|HSFY|[DH]MBX|M(?:IXL|ESP|NX)|P(?:ROX|LAL)|ESX|TBR)1|Z(?:F64A|N(?:2(?:19|82)|333|410|5(?:24|89)|7(?:13|40))|B(?:ED1|T(?:49|7B))|KSC3|SC16|IC4)|KLF1[346]|(?:GMEB|ZN(?:23|65)|RAX|JDP)2|PHX2[AB]|L(?:MX1[AB]|BX2|HX[489])|RFX4|A(?:LX[34]|RX)|D(?:LX[146]|UXA)|I(?:RX[23]|SX)|GCM2|BPTF|GSC2|D(?:PR|RG)X)_)|(?:Z(?:N78|SCA)|ID)4_)|(?:HXB1|TBX2)_)|(?:A(?:RNT2|P2D|TF7)|B(?:ARX2|HE41)|CEBPZ|FOX(?:C2|D1|P3)|G(?:LI(?:S3|2)|ATA5)|H(?:X(?:D(?:1[03]|[49])|A[57]|B6|C[68])|LTF|E(?:S1|Y2))|CDC5L|M(?:LXPL|AFA|YBB|SX2|CR)|N(?:R(?:1H2|2F6|4A3)|FAT5)|O(?:NEC2|TX1)|ARI3A|P(?:ITX2|RRX1|O(?:4F2|6F1)|PARD|AX[238]|URA)|S(?:OX1[358]|MAD1)|T(?:E(?:AD3|F)|FCP2|BX5)|(?:FOXF|HMGA)[12]|Z(?:FHX3|N(?:148|423)|EP[12])|RARB|DLX2|E(?:GR[34]|LK3)|IRF5|GCM1)_)|(?:BRCA|CXXC|HESX|RREB|NR0B|PLAG|E4F|SPZ|TLX)1_)|(?:FU|H)BP1_)H|U(?:BIP1|NC4)_H)UMAN\.H11MO\.0\.D|(?:NR1D1_MOUSE\.H11MO\.1|N(?:R1I[23]|FIA)_MOUSE\.H11MO\.0|(?:N(?:R1I[23]|FIA)_H|TH[AB]_H)UMAN\.H11MO\.0|(?:(?:(?:(?:(?:HAND1|RARG)|RFX3)|NFAC2)|(?:RFX6|SP5))_MOUSE|T(?:F2L1|HA)_MOUSE)\.H11MO\.[01]|(?:PATZ|VEZF)1_HUMAN\.H11MO\.[01]|ZN(?:(?:(?:350|418|394|554)|708)_HUMAN\.H11MO\.0|(?:F85|134|F41|341|563|770)_HUMAN\.H11MO\.[01]|816_HUMAN\.H11MO\.[01])|ATF2_HUMAN\.H11MO\.2|PBX1_(?:HUMAN\.H11MO\.1|MOUSE\.H11MO\.2)|COT1_MOUSE\.H11MO\.1|BRAC_MOUSE\.H11MO\.1|COT1_HUMAN\.H11MO\.[01]|SP2_MOUSE\.H11MO\.1|WT1_HUMAN\.H11MO\.0)\.C|(?:(?:(?:(?:(?:(?:(?:(?:FOXP2|HNF1A)|(?:CEBPD|NKX32|RORG|ITF2))|TBX3)|(?:SOX17|TFDP1|ETV5))_H|ZBT(?:18|B6)_H|(?:PRDM6|SMCA1|(?:FEZF|THAP)1|Z(?:FP28|N(?:F76|1(?:36|40)|2(?:14|5[07]|6[04])|3(?:2[09]|31|8[24])|4(?:36|49)|5(?:28|4[79]|8[26])|(?:31|46)7|490|6(?:67|80)|F18|768)|3[25]4A|BT(?:14|48)|(?:FP8|N50)2|N121|SC(?:22|31)|IM3)|HXC9|OSR2|OZF)_H|KLF(?:12|9)_H|ZNF8_H)|(?:GFI|HXA)1_H)|(?:C(?:LOCK|REM|DX1)|FOX(?:C1|J2|O4)|H(?:I(?:F1A|NFP|C1)|X(?:A1[03]|B[78])|LF)|(?:FOXQ|INSM|HEN)1|IKZF1|M(?:ECP2|YF6|TF1)|N(?:R(?:2(?:C1|E3)|4A2)|FAC4|OBOX|KX(?:28|31))|OVOL1|ARI5B|P(?:RRX2|O[23]F1|AX6|BX2|EBB|IT1)|NF2L1|S(?:(?:MCA|OX)5|NAI1)|R(?:(?:XR|EL)B|ORA)|AIRE|DLX3|ELF2|IRF[79]|CUX1|TFEB|KLF8)_H)|LHX3_H)UMAN\.H11MO\.0\.C|(?:(?:(?:(?:(?:(?:(?:BACH1|(?:E(?:PAS1|RR3|2F7)|HNF4G|NFKB2))|SOX3)|(?:DMRTB|FOXL2|MSGN1|PRDM9|SIX4))|ZN431)|(?:GFI|HXA)1)|(?:C(?:LOCK|REM|DX1)|FOX(?:C1|J2|O4)|H(?:I(?:F1A|NFP|C1)|X(?:A1[03]|B[78])|LF)|(?:FOXQ|INSM|HEN)1|IKZF1|M(?:ECP2|YF6|TF1)|N(?:R(?:2(?:C1|E3)|4A2)|FAC4|OBOX|KX(?:28|31))|OVOL1|ARI5B|P(?:RRX2|O[23]F1|AX6|BX2|EBB|IT1)|NF2L1|S(?:(?:MCA|OX)5|NAI1)|R(?:(?:XR|EL)B|ORA)|AIRE|DLX3|ELF2|IRF[79]|CUX1|TFEB|KLF8))|LHX3)_MOUSE\.H11MO\.0\.C|(?:ASCL2|BARX1|D(?:MRT1|LX5)|FOXD3|DDIT3|N(?:FI(?:L3|B)|GN2)|OVOL2|PITX1|T(?:BX20|EAD2)|E(?:TV6|VX1)|GLI1|MYBA|CUX2|VSX2|ZIC2|LHX6)_(?:HUMAN\.H11MO\.0\.D|MOUSE\.H11MO\.0\.C)|PROP1_(?:HUMAN\.H11MO\.0\.D|MOUSE\.H11MO\.0\.C)|(?:(?:(?:(?:BCL6|CTCF)|FOS)|JUN)_|KLF1_|MY[BC]_)(?:HUMAN|MOUSE)\.H11MO\.0\.A|USF[12]_(?:HUMAN|MOUSE)\.H11MO\.0\.A|XBP1_(?:HUMAN\.H11MO\.0\.D|MOUSE\.H11MO\.0\.C))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.93 = 0.93 seconds
  * Elapsed CPU time:
     - User: 0.88
     - Sys: 0.04
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 35
  * Maximum resident set size (RSS: memory) (kiB): 127308
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 16
  * Exit status: 0


homer
^homer__(?:(?:A(?:CTYKNATTCGTGNTACTTC_Mouse_Recombination_Hotspo|AYTAGGTCA_RORg|GGTGTGAAM_Tbe)|CTYTCTYTCTCTCTC_GAGA\-repea)t|T(?:GCAGTTCCAANAGTGGCCA_CTCF\-SatelliteElement|TGCCAAG_NF1\-halfsite|BGCACGCAA_Arnt_Ahr)|A(?:TTTGCATAACAATG_OCT4\-SOX2\-TCF\-NANO|CAGGAAGTG_ER|ACAGCTG_Myo)G|A(?:(?:CCGTGACTAATTNN_PAX3_FKHR|ACAGGAAAT_EWS_FLI1)|TTTCCTGTN_EWS_ERG)\-fusion|CACAGCAGGGGG_Unknown\-ESC\-element|A(?:(?:(?:NTTMRCASBNNNGTGYKAAN_Brachyury|AC(?:TACAATTCCCAGAATGC_GFY\-Staf|CGGAAGT_ETS)|GGTGHCAGACA_Tbox_Smad|T(?:GCATAATTCA_Pit1\+1bp|T(?:AACACCT_Eomes|GC(?:ATCAT_Chop|GCAAC_CEBP)|TTCCATT_NFAT))|CTACAATTCCC_GFY|GCCAATCGG_NFY)|GGTCAAGGTCA_RARg)|DGGYAGYAGCATCT_PRDM9)|(?:GG(?:AGCTGTCCATGGTGCTGA_REST\-NRS|TCCCTAGGGA_EB)|A(?:T(?:TTCCCAGVAKSCY_ZNF143_STA|AGTGCCACCTGGTGGCCA_CTC)|V(?:YTATCGATAD_DRE|CAGGAAGT_EH)|CATCCTGGT_SPDE)|N(?:AGTTTCABTHTGACTNW_bZIP_IR|TGGGTGTGGCC_EKL)|CGGAAGTGAAAC_PU\.1\-IR|TTCGCGCGAAAA_E2|GTGCGCATGCGC_NR|RTCATGTGAC_MIT|DATGASTCAT_BAT)F|C(?:GG(?:CTGCNGNNNNCAGATAA_GATA_SCL|TTGCCATGGCAAC_RFX)|NNBRGCGCCCCCTGSTGGC_BORIS|TGGCAGGCTGCCA_Tlx_|C(?:ATATATGGNA_CArG|WGGAATGY_TEAD[24])|AAACCACAG_RUNX)|(?:AG(?:TAAACAAAAAAGAACANA_FOXA1_A|GTCANTGACCTN_FX)|NGAGGTCANNGAGTTCANNN_VD|TAGGGCAAAGGTCA_RX)R|(?:N(?:A(?:AACCGGTTCAAACCGGTT_Tcfcp2l|TTTCCNGGAAAT_STAT)|N(?:TGTTTATTTTGGCA_NF1_FOXA|VVCAGCTGBN_Ascl|ATGASTCATH_Fra)|RYTTCCGGH_Fli)|(?:GA(?:ATGGAAAAAATGAGTCAT_NFAT_|TGACTCATCN_Jun\-)A|N(?:ATGTTGCAA_CEBP_A|YYTGTTTACHN_FOX))P|A(?:(?:A(?:AGTAAACA_FOXA1_GSE2683|CCGGAAGT_ETV)|C(?:TTTCACTTTC_PRDM|AGGAAGTG_ETS)|GGCCTAG_ZNF71|TGMATATDC_Pit)|AACCACAAA_RUNX)|C(?:NCTTCCNGGAAGN_Stat3\+il2|T(?:TGGCACNGTGCCAA_N|GCGCATGCGC_NR)F|AAGATGGCGGC_YY|WGGCGGGAA_E2F|TGTTTAC_Foxo)|G(?:GTTAAACATTAAC_Hn|ATGACGTCA_At)f|G(?:GTTGCCATGGCAA_Rf|KVTCADRTTWC_Si)x|G(?:CCATCTGTT_NeuroD|SCTGTCACTCA_PBX|GCCCCGCCCCC_Sp|NCACGTG_BMAL)|R(?:ACAGCTGTTBH_HLH\-|SCACTYRAG_Nkx2\.)|(?:A(?:AGCACTTAA_Nkx3|GAGGAAGTG_PU)|GKTAATGR_Nkx6)\.|(?:G(?:TCCCCAGGGGA_EB|GTCACGTGA_US)|GAAAGTGAAAGT_IR|AACCGGAAGT_EL)F|DDAAAAATTTTY_SFP|A(?:CTGATAAGA_PQM|TGACTCATC_AP)\-|CAGATAAGGN_Gata|H(?:TTTCCCASG_Rbpj|ACTTCCGGY_Elk)|T(?:CA(?:CGTGAYH_Cbf|TCAATCA_Pdx)|GCGTGGGYG_Egr)|CTAATKGV_Isl)1|GGGRAARRGRMCAGMTG_RBPJ_Ebox|N(?:N(?:N(?:VCTGWGYAAACASN_Fox_Ebox|NNBAGATAWYATCTVHN_GATA)|CACCTGCN_E2A)|AGATWNBNATCTNN_GATA|NNCTTTCCAGGAAA_Bcl6|CTGGAATGC_TEAD|HAACBGYYV_BMYB|TATYGATCH_HNF6)|(?:A(?:GAT(?:STNDNNDSAGATAASN|(?:GKDGAGATAAG|AASR))_GATA|ACATGCCCAGACATGCCCN_p5|CATGCCCGGGCAT_p5)|N(?:NNGCATGTCCNGACATGCC_p6|CYAATAAAA_HOXD1)|GGNTCTCGCGAGAAC_ZBTB3|C(?:C(?:TGTCAATCAN_Pb|WTTGTY_So)x|GTGGGTGGTCC_GLI|TTCCGGGAA_Stat)|CNGTCCTCCC_Znf26|ADBTAATTAR_Lhx|TWGTCTGV_Smad)3|(?:A(?:AACYKGTTWDACMRGTTTB_GRHL|C(?:AGCTGCTG_Tcf1|WTCAAAGG_TCFL)|TATGCAAAT_Oct)|G(?:GGGGAATCCCC_NFkB\-p50_p5|A(?:TGACTCAGCA_NF\-E|AASYGAAASY_IRF)|YCATCMATCAT_HOXA)|(?:GT(?:TGCCATGGCAACM_Rf|CATAAAAN_Cd)|CCCATTGTTC_So|TAATTAGN_Lh)x|C(?:GGTCACGCCAC_Srebp|CCACGTGCT_Pho|TGTCTGG_Smad)|N(?:ATGASTCABNN_Fosl|WAACCACADNN_RUNX|GCGTGGGCGGR_Egr|YTAATCCYB_Otx)|(?:CTTGTTTACATA_Fox|NCCTTATCTC_Gat)a|(?:NRRTGACGTCAT_At|GTCACGTGGT_Us)f|HTGCTGAGTCAT_Nrf|RCCATMTGTT_Olig|TGCTGAGTCA_Bach|TTCAAGGTCA_Nr5a|BTCAAGGTCA_Nr5a)2|(?:CCATTGTATGCAAAT_Oct4_Sox1|N(?:TAATTDGCYAATTANNWWD_Pax|GRTGACGTCAY_Atf)|TGACCTTTNCNT_Nur7|TAATC(?:HGATTAC|AATTA)_Pax)7|(?:A(?:(?:AAGTAAACA_FOXA1_GSE2782|GGTCTCTAACC_PRDM1|TTTGCATAA_Oct)|CTGAAACCA_IRF)|G(?:AGGTCAAAGGTCA_TR|GCGGGAAAH_E2F)|TGATTRATGGCY_Hoxb|N(?:TTTCCAGGAAA_STAT|BWGATAAGR_Gata|RYTTCCGGY_Elk|AHCAGCTGD_Ap)|(?:ACATCAAAGGGA_Tc|GCCACACCCA_Kl)f|MTGATGCAAT_Atf|YCTTTGTTCC_Sox)4|(?:NNTTCTGGAANNTTCTAGAA_H|ATGACGTCATCC_c\-Jun\-C|GGGTTACTANAGGTCA_LX|AGAACAGNCTGTTCTT_A|TGACCTTTGCCCCA_PPA|A(?:AGGTCACNGTGACC_E|GTTTCAGTTTC_IS)|TTCTAGAABNTTCTA_H|CGGTGACGTCAC_C)RE|G(?:G(?:AAATTCCC_NFkB\-p65\-Rel|C(?:CAT(?:AAATCA_H(?:OXA|oxc)9|TAAC_Nanog)|AATTAAA_Unknown)|YCATAAAW_caudal|GGGGGG_Maz)|TCATGCHTGRCTGS_Pax8|CTGASTCAGCA_MafK|HCACGTG_CLOCK)|GT(?:AGGTCACTGGGTCA_Reve|GACCTTGA_Esr)rb|AACAGGAAGT_Ets1\-distal|CCAGGAACAG_AR\-halfsite|(?:(?:(?:A(?:GGAAACAGCTG_ETS|ACAGCTGTTHN)|GCCACGTG)_E|GGTTGCCATGGCAA_X)\-|C(?:TATAAAAGCSV_TATA|CGGTCACGTGA_E)\-)box|(?:ATGCCCTGAGGC_AP\-2alph|CA(?:GAGGNCAAAGTCCA_HNF4|AAGGTCAG_Err)|GGTCANYTGAGGWCA_THR|YTAATYNRATTA_Phox2|A(?:TCACCCCAT_Srebp|CAGCTGTTN_Ptf)1|(?:GCACGTACCC_HIF|CCAAAAATAG_Mef)2|TACGTGCV_HIF\-1)a|SCCT(?:SAGGSCAW_AP\-2gamma|AGCAACAG_Rfx5)|(?:ACAGGATGTGGT_ETS_RUN|GCTAATCC_CR)X|CCTTTTATAGCC_TATA\-Box|(?:AWWNTGCTGAGTCAT_Bac|NNTGTGGATTSS_Fox)h1|(?:A(?:GGGGATTTCCC_NFkB\-p6|TTTCTNAGAAA_STAT|ASCACTCAA_Nkx2\.)|G(?:CAGCCAAGCGTGACC|TCACGCTCNCTGA)_PAX|BAACAGCTGT_Myf|ACVAGGAAGT_ELF|DGGGYGKGGC_KLF)5|HWWGTCAGCAWWTTT_MafF|NAGAACAGNCTGTTCT_GRE|GCTGTGGTTT_RUNX\-AML|V(?:AGRACAK(?:WCTGTYC_GRE|NCTGTBC_PR)|NAVCAGCTGGC_Atoh1|DTTTCCCGCCA_E2F7|BSYGTCTGG_Smad4|GCTGWCAVB_Meis1)|(?:ANTTCTTAAGAA_STAT|TTCCKNAGAA_STAT|CCATTGTTNY_Sox)6|D(?:CYAAAAATAGM_Mef2c|ATGASTCATHN_Atf3)|(?:GGTGYTGACAGS_Tbx2|CCWTTGTYYB_Sox1)0|KC(?:ACGTGMCN_bHLHE40|CACGTGAC_NPAS2)|A(?:GCAGCTGCTGC_Myo|TGACGTCATCN_Jun)D|AAAGRGGAAGTG_SpiB|AAATCACTGC_Gfi1b|A(?:TTCTCGCGAGA_G|GGCCTGG_Z)FX|(?:AACCGGAAGT_GABP|TGCTGACTCA_Maf)A|ACCACGTGGTCN_Max|(?:GNCCACGTGG_[cn]|NCCACGTG_c)\-Myc|R(?:TACGTGC_HIF\-1b|GGATTAR_GSC)|(?:TGGCAGTTGG_A|GGCVGTTR_)MYB|GGCGGGAARN_E2F6|ACATCAAAGG_Tcf3|AGGTGTCA_Tbx5|ANCAGCTG_SCL)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:04.16 = 4.16 seconds
  * Elapsed CPU time:
     - User: 3.76
     - Sys: 0.38
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 339
  * Maximum resident set size (RSS: memory) (kiB): 1257744
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 16
  * Exit status: 0


idmmpmm
^idmmpmm__(?:Eip74EF|abd\-A|Antp|e(?:ms|ve|n)|o(?:vo|c)|Ubx|f(?:kh|tz)|hkb|nub|s(?:hn|na)|kni|t(?:ll|wi)|(?:Df|M[ae]|bc|ca|pr)d|vnd|(?:sr|us)p|hb|Kr|gt|dl|[Dh])$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 75%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 3536
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


jaspar
^jaspar__MA(?:0(?:080\.4|0(?:0[37]|24|35|5[28]|79|83|98)\.3|1(?:05\.4|(?:0[246]|1[2-4]|37|4[1358])\.3|54\.3)|(?:0(?:0[1259]|1[478]|2[78]|3[23679]|4[236-8]|50|6[0258]|7[56]|88|9[03-59])|1(?:0[038]|17|2[24]|3[1268]|4[0467]|5[0367]|62|97)|2(?:16|37|47|58)|4(?:52|6[1469]|7[2-5]|86|98)|5(?:1[0-2]|2[245]|9[28]))\.2|600\.2)|0(?:0(?:0[46]|1[3569]|2[23569]|3[018]|4[019]|5[1679]|6[3679]|7[0-478]|8[124-7]|9[1267])|1(?:0[179]|1[15689]|2[56]|3[059]|4[29]|5[12589]|6[013-9]|9[0-689])|2(?:0[1-4689]|1[0-2457-9]|2[0-24-9]|3[0-24-689]|4[0-35689]|5[0-4679]|6[47]|7[18]|8[14-689]|9[5-8])|3(?:0[03679]|1[034679]|3[17-9]|4[1256]|5[37]|6[459]|8[36])|4(?:0[2689]|18|[23]3|4[0235-9]|5[0146-9]|6[23578]|7[016-9]|8[0-589]|9[0-79])|37[12689]|5(?:1[3-9]|2[0136-9]|3[0-24-6]|4[1568]|5[014-68]|6[12689]|70|8[0458]|9[13-79])|6(?:0[1-9]|1[02-8]|2[0-8])|(?:1[78]|50|6[3-9]|[78][0-9])[0-9]|9(?:[01][0-9]|2[0-47-9]|3[13]|5[6-9]|6[03-8]|76|8[08]|9[278]))\.1|10(?:(?:0[125]|1[12]|21|47|5[1-3]|6[189]|7[04])|99)\.1)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.02 = 0.02 seconds
  * Elapsed CPU time:
     - User: 0.02
     - Sys: 0.00
  * CPU usage: 96%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 6296
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


neph
^neph__UW\.Motif\.0(?:0(?:0[1-57-9]|[34][49]|6[28]|[18][38]|95)|104|3(?:28|60|73)|139|4(?:11|69)|(?:[03]5|57)6|077|6(?:16|57))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 3028
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


predrem
^predrem__nrMotif(?:1(?:30?2|13[68]|41[27]|933|06|5[67]|75)|(?:14|9)95|187[15]|1056|2(?:0(?:[09][06]|8)|3(?:25|3)|(?:02|6)9|1(?:7[15]|89)|416|20|51)|(?:120|2(?:30|5[89]|9))0|(?:1(?:14|4[56])|249)1|(?:135|2(?:21|52|16))7|1(?:[17]1|29)4|(?:1(?:01|77)|2(?:34|11|46|8))8|503|340|7(?:71|[18]7)|8(?:04|18)|51|95|4)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 3920
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


scertf
^scertf__(?:harbison\.(?:DAL80|GLN3|HAP4|MSN[24]|MOT2|THO2|(?:NDD|SUT)1|ZAP1)|badis\.YER130C|morozov\.(?:MET28|CUP9)|pachkov\.(?:SPT1|HAP)5|(?:macisaac\.RTG|spivak\.HAP|badis\.GZF)3|(?:macisaac\.(?:ACE|HAP)|badis\.(?:ABF|FKH))2|(?:m(?:acisaac\.RFX|orozov\.MCM)|(?:macisaac\.(?:CB|SN)|badis\.FZ)F|(?:macisaac\.J|spivak\.P)HD|pachkov\.(?:HSF|ORC)|spivak\.(?:BAS|CRZ|RPH)|(?:spivak\.RL|badis\.HC)M|spivak\.TEC|badis\.REI|badis\.GIS|badis\.YOX|foat\.[DM]IG|foat\.OPI|foat\.FKH|zhu\.FHL|zhu\.GAT)1|morozov\.ARG80|(?:morozov\.PHO|spivak\.GCN)4|(?:morozov\.SM|zhu\.SF)P1|spivak\.(?:TYE7|YAP6)|(?:spivak\.CIN|badis\.SWI)5|badis\.CST6|badis\.TOS8|zhu\.(?:NHP6[AB]|MIG[23])|zhu\.PHO2)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.04 = 0.04 seconds
  * Elapsed CPU time:
     - User: 0.04
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 2
  * Maximum resident set size (RSS: memory) (kiB): 7600
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


stark
^stark__(?:TGGAGGDGGWAHTMATBVRTGWDDDRKKMW|(?:R(?:RAYATTYBKSGVATKVC|AAMGGRTT|TAA(?:A[CT]|M))|AA(?:TTAANNNNNCATN|CTG)|(?:A(?:A(?:NTNTAATGA|HKMTHB)|WNTGGGT)|TGANT|G(?:CAA|GGT))C|TWTKACKTAAN|(?:GNCTANWWA|CAAT)T|S(?:MATAAA|GG)AA|(?:TT(?:CCSGG|AYGT)|A(?:AAT|TCA)T|CAAC|MAAC)A|CACTTR)A|K(?:NVNVBYTAATKRSBHNVD|HGATAASR)|(?:ANHDDBHGATAASSDNN|R(?:BYGTGRGAAMC|TATATRTR|RCAGGTG))B|(?:TNRCGCNYNATTAAT|(?:GGGGAWTCC|CWYBD)C|KYTAATKDN|RA(?:CASCTG|TTAM)|ATGCGGG|YGYGGT)Y|R(?:WWWASWBDYSKNM|(?:CGCMATT|ATTAA))W|(?:TG(?:CATAATTAATTA|GCGC)|G(?:GGGAWYCM|TCANTNAA))C|B(?:YRHBACAAWGTDDB|CATAAATYA)|MGAADMGAADMGAAD|V(?:RGKTYAWTGAMMYY|SNKTDATKRCNV|ATTWGCAT)|(?:SVTAATYGATTAN|MVHTAAKCC|GRGGTCAY|T(?:YAAGTG|TAT))S|(?:RRNNNMCACCT|GAGGAA)GC|Y(?:SAAGGWCRCHRM|TAATGAVS|GATA(?:AG)?C)|(?:MATTAAWNATGC|YTAWWWWTA|CMGGAA|CASGTA|TAATT)R|STATAWAWRSVVV|WHWWWWWWWWKK|TGGCACGTGYYA|(?:R(?:WWNTNRCACY|AGTGAAAG)|(?:CCTTTGATC|TTAA|GCCA)T|TCAWTTAAM|WCYGGTT|CACATG)T|GGGGAMWWCCM|H(?:AATTAYGCR|SWAACHG)H|MRYTTCCGYY|STATAWAWR|T(?:GACGTCAT|AAATAG)|CTCRTAAAW|(?:A(?:WCAGGTG|CATGT)|GCAGSTG)K|BYAATTARH|TGACGTCA|GTACGTG|(?:TTTA|CAG[GS])TG)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.06 = 0.06 seconds
  * Elapsed CPU time:
     - User: 0.06
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 40160
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


swissregulon
^swissregulon__(?:(?:hs__(?:(?:(?:(?:(?:(?:ARNT_ARNT2_BHLHB2_MAX_MYC_US|TGI|EB|M[TZ]|GZ)F|H(?:OXA9_MEIS|IC|MX|ES)|E(?:WSR1\-FL|V)I|P(?:OU[16]F|ATZ|[BD]X)|TFDP|FOX[LNQ]|TEAD|MYOD|NR(?:3C|6A|F)|[CR]REB|SPZ|ALX|YY)1|(?:FOS_FOS_B_L1__JUN_B_D|TAL1_TCF_3_4_12|HOX_A(?:6_A7_B6_B7|4_D4|5_B5)|FOX_(?:F1_F2_J1|(?:(?:C1_C|D1_D)|I1_J)2)|MEF2_A_B_C_D|N(?:ANOG_mouse|FY_A_B_C)|S(?:OX_8_9_10|TAT5_A_B)|TFAP2_A_C)_|DMAP1_NCOR_1_2__SMARC|HBP1_HMGB_SSRP1_UBTF|R(?:FX1\.\.5_RFXANK_RFXAP|XR(?:A_VDR_dimer|_A_B_G)_|BPJ|ORA)|(?:TLX1\.\.3_NFIC|POU5F1_SOX2)_dimer_|(?:LEF1_TCF7_TCF7L|H(?:NF4A_NR2|S)F|SREBF|GTF2A|N(?:KX6\-|R5A|HLH)|HAND|HMGA|(?:PRR|MS)X|E(?:TS|N)|VSX)1_2|A(?:DNP_IRX_SIX_ZHX|IRE|TF[246])|(?:NFKB1_REL_REL|ESRR|H[IN]F1)A|(?:AHR_ARNT_ARNT|TFCP|FOSL|MYBL|BACH|KLF1|NR4A|CUX|LMO)2|N(?:KX2\-3_NKX2\-5|FIX)|(?:CEBPA_B_DDIT|ATF5_CREB|FOX[DP]|NFIL|TP5)3|T(?:CF4_dimer|FAP(?:2B|4)|LX2|BP)|S(?:MAD1\.\.7_9|P(?:I[1B]|1)|OX[25]|RY)|STAT2_4_6|(?:(?:FOXO1_3|(?:CDX|ELF)1_2|LHX3)_|POU3F1\.\.|N(?:KX2\-1_|R1H))4|(?:POU2F|SNAI|PITX|RUNX|EGR|GLI)1\.\.3|NFATC1\.\.3|ONECUT1_2|NKX2\-2_8|GATA1\.\.3|(?:E2F1\.\.|TBX4_)5|Z(?:IC1\.\.3|BTB1?6|FP161|NF(?:14[38]|238|384)|NF423|EB1)|(?:ARID5|TFE)B|P(?:AX(?:3_7|[24-68])|PARG)|N(?:FE2L|KX3\-)[12]|C(?:DC5L|RX)|E(?:OMES|P300)|G(?:FI1B|ATA6|TF2I)|SOX17|IKZF[12]|MA(?:FB|Z)|(?:CTC|EH|HL)F|BPTF|FEV|JUN|DBP)\.|(?:POU5F1\.|N(?:ANOG|FE2)\.|(?:GFI1|(?:MYB|(?:AR|T)))\.))|MYFfamily\.)|bHLH_family\.)p|mm__(?:(?:(?:(?:(?:(?:ARNT_ARNT2_BHLHB2_MAX_MYC_US|TGI|EB|M[TZ]|GZ)F|H(?:OXA9_MEIS|IC|MX|ES)|E(?:WSR1\-FL|V)I|P(?:OU[16]F|ATZ|[BD]X)|TFDP|FOX[LNQ]|TEAD|MYOD|NR(?:3C|6A|F)|[CR]REB|SPZ|ALX|YY)1|(?:FOS_FOS_B_L1__JUN_B_D|TAL1_TCF_3_4_12|HOX_A(?:6_A7_B6_B7|4_D4|5_B5)|FOX_(?:F1_F2_J1|(?:(?:C1_C|D1_D)|I1_J)2)|MEF2_A_B_C_D|N(?:ANOG_mouse|FY_A_B_C)|S(?:OX_8_9_10|TAT5_A_B)|TFAP2_A_C)_|DMAP1_NCOR_1_2__SMARC|HBP1_HMGB_SSRP1_UBTF|R(?:FX1\.\.5_RFXANK_RFXAP|XR(?:A_VDR_dimer|_A_B_G)_|BPJ|ORA)|(?:TLX1\.\.3_NFIC|POU5F1_SOX2)_dimer_|(?:LEF1_TCF7_TCF7L|H(?:NF4A_NR2|S)F|SREBF|GTF2A|N(?:KX6\-|R5A|HLH)|HAND|HMGA|(?:PRR|MS)X|E(?:TS|N)|VSX)1_2|A(?:DNP_IRX_SIX_ZHX|IRE|TF[246])|(?:NFKB1_REL_REL|ESRR|H[IN]F1)A|(?:AHR_ARNT_ARNT|TFCP|FOSL|MYBL|BACH|KLF1|NR4A|CUX|LMO)2|N(?:KX2\-3_NKX2\-5|FIX)|(?:CEBPA_B_DDIT|ATF5_CREB|FOX[DP]|NFIL|TP5)3|T(?:CF4_dimer|FAP(?:2B|4)|LX2|BP)|S(?:MAD1\.\.7_9|P(?:I[1B]|1)|OX[25]|RY)|STAT2_4_6|(?:(?:FOXO1_3|(?:CDX|ELF)1_2|LHX3)_|POU3F1\.\.|N(?:KX2\-1_|R1H))4|(?:POU2F|SNAI|PITX|RUNX|EGR|GLI)1\.\.3|NFATC1\.\.3|ONECUT1_2|NKX2\-2_8|GATA1\.\.3|(?:E2F1\.\.|TBX4_)5|Z(?:IC1\.\.3|BTB1?6|FP161|NF(?:14[38]|238|384)|NF423|EB1)|(?:ARID5|TFE)B|P(?:AX(?:3_7|[24-68])|PARG)|N(?:FE2L|KX3\-)[12]|C(?:DC5L|RX)|E(?:OMES|P300)|G(?:FI1B|ATA6|TF2I)|SOX17|IKZF[12]|MA(?:FB|Z)|(?:CTC|EH|HL)F|BPTF|FEV|JUN|DBP)\.|(?:POU5F1\.|N(?:ANOG|FE2)\.|(?:GFI1|(?:MYB|(?:AR|T)))\.))|MYFfamily\.)|bHLH_family\.)p)2|(?:hs__(?:(?:E(?:LK1_4_GABP_A_B1_|SR1)|R(?:XRG_dimer|EST)|S(?:TAT1_3|RF)|FOXA2|PRDM1|KLF4|XBP1)|IRF1_2_7)\.p|mm__(?:(?:E(?:LK1_4_GABP_A_B1_|SR1)|R(?:XRG_dimer|EST)|S(?:TAT1_3|RF)|FOXA2|PRDM1|KLF4|XBP1)|IRF1_2_7)\.p)3|sacCer__(?:Y(?:ER130C|AP6|OX1)|S(?:PT1|WI)5|DAL80|NHP6[AB]|A(?:BF|CE)2|CUP9|FKH[12]|GCN4|HAP[2-5]|MIG[1-3]|MSN[24]|P(?:DR[13]|HO[24])|G(?:LN|ZF)3|RTG3|CIN5|T(?:OS8|YE7)|CST6|(?:CRZ|FHL|BAS|G(?:AT|IS)|(?:CB|FZ)F|HSF|[HM]CM|R(?:EI|LM|PH)|S(?:IG|[FM]P)|ORC|TEC)1|R[FO]X1))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.24 = 0.24 seconds
  * Elapsed CPU time:
     - User: 0.22
     - Sys: 0.01
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 7
  * Maximum resident set size (RSS: memory) (kiB): 62404
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


taipale
memory allocation of 66336431728 bytes failedCommand terminated by signal 6

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 1:40.82 = 100.82 seconds
  * Elapsed CPU time:
     - User: 100.68
     - Sys: 0.02
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 10
     - Involuntarily (time slice expired): 278
  * Maximum resident set size (RSS: memory) (kiB): 45748
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


taipale_cyt_meth
^taipale_cyt_meth__(?:(?:(?:(?:(?:(?:(?:(?:FOXP1_NTGTTTRNNNNNNNNNNNNNNNNWCAA|RXRB_NRGGTCAAAGGT|TCFL5_NCACGYG)CA|(?:T(?:BX19_NANGTGTKA|_NANGTGTGAN)NNNTNACACC|GRHL1_NAACCGGT|OSR2_NGCTACYG)T|FOXA2_NWNWGTMAATATTKRYNYW|(?:PAX4_NATTTCACGCWTSANYGNN|(?:CEBPE_NRTTGCGYA|ATF6B_TGCCACGTC)A|HAND2_AACACCTG)Y|PAX1_NSGTCACGCWTSANYG|HNF4A_NRG(?:GTCAAAGTCCR|TCCAAAG(?:GT|TC)CR)|(?:P(?:AX(?:7_NSGTCACGSNWR|4_NYACGCTAA)T|OU3F4_NTATGCGCA)T|N(?:FATC4_N(?:TTTCCRYGG|AYGGA)AA|KX6\-3_NTMATTA)|T_NTCACACNTANGTGTG|(?:E2F7_NTTTCCCGCC|HOXC13_NCTCGTA)AA|(?:LBX2_CTMAT|VSX1_Y)TAATT|FOXK1_NWYGTAAAY|RFX7_NGTTGCY|HMX1_NCAMTTA)A|(?:N(?:R3C2_NGNACRNNNYGTN|FKB2_NGGGGAWNYMC)|(?:RFX3_NGTTGCCWAGCA|NFAT5_NYGGAAANNT)A|FOXO3_NTCCCCACA|GSC2_YTAATC)C|CUX2_NTGATCGATYR|NFE2_NATGASTCAT|BARHL1_NTAATTG)N_eDBD_meth|(?:(?:KLF10_RMCACRCCCMYNMCACRCCCMC|FOXD2_NYWANGTAAACAN)_eDBD|SOX3_NGAACAATGN_FL)_meth|(?:(?:(?:(?:(?:(?:(?:(?:ELF3_ACCAGGAAGNNNNNNNNNWWWWW|PRDM4_YRRCRGTTTCRAGKSYNCCC|POU3F2_TAATKANNNNNTAATKA|HES5_NCACACKY)|(?:ETV4_NCAGGAAGGAAGT|MSX1_NTCGTTA)N)|(?:(?:TLX3_NAATTGNNNNNNNNNNNCAAT|(?:IRX1_NACGYGNNNNNNCR|CREB1_NRTGAYG)CG|PAX4_NAATTANNTAAT|PROX1_NAAGRYGTCT|E(?:LF2_NACCM|TV2_NRCA)GGAAG)T|(?:RUNX2_NWAACCACANNNACCACA|(?:POU2F2_NTCATTATG|FOXG1_NAYRTAAA)C|P(?:AX7_NTAATTGAT|OU4F3_NTATGCA)T|NR2C1_NRAGGTC|(?:HOXA6_R|(?:LHX4|EN1)_N)TCGTT)A|GMEB2_NKACGTNNNNTACGTM|FOXN2_NGCATNNNNNNNATGC|POU3F4_NTAATTWATGCG|FOXD2_NWACAATAAYAWW|(?:IRF7_NNGAAANYGAAAN|CLOCK_NMCAYGYG)Y|DMRTC2_WWTYGNTACAT|ONECUT1_NTATTGATY|USF2_MNCAYGTGAY|GATA2_NWGATAAS)N)|(?:IRX5_NCGCGWNNNWCGC|NANOG_TTAAKT)GN)_eDBD|(?:SPDEF_NAMCAGGAT|ELK3_NACCGGAA)GTN_FL)|(?:P(?:OU6F1_TYATTANNNNTYATTA|BX1_KTGATTGAYK)|CREB3L1_TGCCACRYGTACR|ONECUT2_NTATTGATCCGT|KLF12_NGCCGACGCCCW|NR1I3_NYGAACTWW)_FL)|(?:TLX3_NAATTGNNNNNNNNNCAATT|(?:ETS2_NACAGGANNNNNNTCCT|GCM2_RTGNKG)GT|NHLH2_NKGNMKCAGCTGCGYCM|POU5F1_NYTAATTATGCGNR|GMEB1_NKACGTNNNNACGTM|NKX2\-8_NATGTCGTTAYTG|(?:BARX2_NWAAAYCATT|NKX2\-8_NTCGTTS)A|M(?:LX_NNCAYGTGM|AX_RNCATGTG)Y)N_FL)|KLF3_NRCCGCAGCCCN_FL)_meth|(?:(?:TFCP2_AWCCGGWTNNAWCCGGWT|PAX6_NYACGCNTSANYGNNYN)|ESRRG_NYCAAGGTCAN)_eDBD_meth|(?:TCF7L1_(?:WCATCGRGRCGCTGW|ASATCAAAS)|KLF17_NMCCACGCWCCCMYY|(?:TGIF2LY_TGACANNTG|(?:BBX_TGAWCNNNGW|DUXA_TRAYNTAA))TCA|BHLHE40_GTCACGTGAC|S(?:OX7_ACAATNNNATTGT|MAD5_YGTCTAGACA)|PTF1A_NYGTCAGCTGNY)_eDBD_meth|(?:(?:FOX(?:P3_NAWTTGTAYGACAAAT|R2_NYRTAWACATAAATNN)|(?:IRF4_NYGAAASYGAAAS|OVOL1_NRWACCGTTATN|HLF_NRTTRYGYAA)Y|(?:EGR2_NMCGCCCACGC|XPA_NCACCTCAC|HOXC8_NTAATT)A|(?:OTX1_NTAATCCN|RARG_NRGGTCA)Y|TEAD1_NRCATWCC|TGIF2_NTGACAG)N|(?:(?:NR2F6_NRGGTCRNTGACCYN|(?:HOXA10_NGTCGTAAAAN|(?:OLIG3_ACCATATGKT|DLX1_NYAATTAN)))|(?:M(?:AF_NYGCTGACNNNGCR|EF2C_CCWWATWWRG)|LHX8_TRATTGCAATYA|KLF12_NRCCACGCCCW)))_FL_meth|(?:(?:TLX3_NAATTGNNNNNNNNNNCAATT|YY1_NGCCATNTTTGNCNNNNYGTGC|RUNX3_NWAACCGCANNNACCGCAR|POU6F1_NATTATNNNNNNNATAAT|ETV7_NYTTCCSGGAAR|ELF3_NTGTGCGGATGC|MSC_NNACAGCTGTN|ASCL2_ACACGACGC|CDX4_NGYMATAAAA)N|(?:(?:HSF1_NGAANNTTCNNGAA|ELK3_NTCGTAAATGC)N|(?:POU6F1_TATGCNNNGCATA|GATA3_NGATAAGATCW|VENTX_CGATTATCG|NR1I3_NTGAACTWW)))_FL)|(?:(?:KLF10_RMCACRCCCMYNMCACRCCCMC|FOXD2_NYWANGTAAACAN)_eDBD|SOX3_NGAACAATGN_FL))|(?:HSF5_YNGAANNNNNNNNNNNNNAACRTTCNR|POU3F2_TAATTNNNNNNNNAATTA|GLI3_RGACCACCCACRWYG|DMRTC2_RAACGATACA|SREBF1_NTCACGCCAY|E2F2_GCGCGCGCGYW|CREB1_NRTGACGTN)_eDBD)|(?:(?:(?:TLX3_NAATTGNNNNNNNNNNNNNC|PAX4_NAATTANNNNNNNNT)AAT|BCL6_NYGTAATCGAGGAA|JUND_NRTGACGCA)T|(?:IRF3_NCNGTTTCSNSGAAACSGA|GATA2_NYGAT)AAS|(?:HSFY1_NCRTTCGAAWCRTTCG|FOXE1_NSYTAAAYAAAC)AW|FOXN2_NNGCGTSNNNNNSACGCN|(?:TBX20_NAGGTGTGAAGGTGTG|POU4F1_NTGCATWATGC|CREB1_NTGACGCGTC|NR2C1_NRRGGTC)A|(?:IRX1_NACAYGNNNNNNCRT|ELF5_NANNMGGAA)GT|(?:(?:M(?:AX_NCACGTGNNNN|LX_)NCACG|POU2F2_NCATTANNNTAA)T|(?:GLIS2_RCCCCCCRCGW|IRX5_NCRTGTNNNACA)Y|FIGLA_NNCACCT|BARHL1_NTAAAC|NANOG_TTAATK)G|(?:HSF5_NRCGTTCTAGAAYG|(?:BCL6_NTGCTTTCGAGGA|CREB3L4_YGCCACGTC)A|ELF3_NAT(?:(?:AA|R)|KG)CGGATG|JUNB_NATGACGTCA|CUX1_NYATYGAT)Y|POU2F2_NTAATNTATGC|MYBL2_NTAACSGTTR|S(?:PIB_RWWGSGGAAGT|CRT1_NGCAACAGGT|IX6_NSRTATCRY))N_eDBD)|POU3F1_NTAATKAKATGCRN_eDBD)_repr|Z(?:(?:(?:(?:(?:(?:(?:(?:(?:(?:NF(?:177_NTNGRTCKNNNNNNNNAGTCAT|345_TYGCAACNNNNNCAACTGKAC|76_NYWWCCCAYAATGCANYGCR|250_NTAGGCCTA)|BTB(?:33_NRCGCNNWTTTAACATAAY|2_NTTTCCGGTAM))N|(?:B(?:TB(?:37_NYACCGCRNNYACCGYR|12_NGGCCTGCCGTCNN)|ED1_NTRTCGCGAYAN)|NF449_MAGCCCAACC))|IC4_NRCCMCCYGYNGTGN)_eDBD|NF501_NSSCSACGCGAACAM_FL)|NF(?:597_GGCGGCCATYTTG|396_NTGTMCRAAA)N_FL)_meth|NF(?:787_RATGCMNNNNNNNTGCCTCR_FL_meth|(?:684_NYACAGTCCWCCCCTTK|(?:524_NYTCGNACCCK|396_NTGTMCGAAA))N_FL)|(?:BTB22_NKCACTANNNTAGTG|NF343_NYGCTTCACCNCGGY)MN_eDBD_meth|(?:NF(?:660_NYTGATNNCCCAYCCTRN|(?:(?:(?:444_NCRTCCCCCTCCCCC|7(?:5A_NGCTTTTCCCACA|04_NRCCGGCCGGY)|32_NYGTAACNYGAYAC)N|787_TGCCTCMGTTTMCCY)|821_NRGACRGACRGACRN))_FL|BTB(?:14_NTGCRCGTGCACGYG|26_NMTCYAGAAAA)N_FL)_meth|(?:BTB(?:1(?:4_NYGCRCGTGCACGYG|8_NWTCCAGATGTK)|7A_NCGACCMCCG)|NF(?:2(?:74_NRTRTGAGTTCTCRY|96_NASTGGWCAS)|449_NTCGCGNGCMARCA)|NF(?:282_NTTCCCMYNACA|140_NRCAATTCCGCT)C|FP1_NTTTTATACCCAGC)N_eDBD_meth|NF771_NRCGCTAACCATTRN_eDBD_meth)|NF787_RATGCMNNNNNNNTGCCTCR_FL)|(?:NF(?:580_CCTACCCTNNCCTACCCY|281_GCCCCTCCCCCM|449_RCGCCCAACC)|BTB12_NGGCCTGCCGTCNT)_eDBD)|(?:NF(?:276_NTTAAGGNNGTANNNWCSNCCTTA|12_GGKSMTRYTTGTTWYAGCAN)|NF(?:23_NKGKCGCGGNCATGGKN|460_NAACGCCCCCC)G|BTB37_NTGCCGNNTTRGCCGW|IC4_NRCCMCCYGYNGYG)N_eDBD)_repr|(?:(?:NF(?:2(?:76_NTTAAGGNNGWANNNWCSNCCTTAA|81_NCCCCTCCCCC)|12_GGKSMTRCTCGTTATAGCRN)|(?:NF(?:23_NKKKCGCGGNCATGGKN|460_NRMCGCCCCCC)|IC1_NMCCMCCYGCYGW)G|FP42_NGRCRGCCATMTTG)N_eDBD|(?:(?:NF580_CCTACCCTNNCCTACCCT|IC(?:3_NGACCCCCT|5_NGACCCCCY)GCTGTGM)_eDBD|(?:(?:NF(?:684_NYACAGTCCRCCCCTTK|524_NYTCGNACCCR)N_FL|IC(?:1_NRCCM|3_NRCCC)CCYGCTGTGN_FL)|(?:(?:NF7(?:5A_NGCTTTTCCCACMN|40_NYGCCCCCCCCAC)_eDBD|BTB(?:45_NCACCTATAK|7B_NCGACCMCC)N_eDBD)|NF771_NRCGCTAACCATTRN_FL))))_meth|SCAN(?:(?:(?:23_NYCATGTGCTAATTACAMN_eDBD|31_GCATAACYGCCCYGCKKCN_FL)_meth|4_NYGCACACNCTGWAARN_eDBD)_repr|29_MMGYGTAGMCGKCTACACNN_eDBD_(?:meth|repr)|16_NANTGTTAACAGAGCCTCN_eDBD_(?:meth|repr)|9_NRGGATAAGATAAGAANCMN_eDBD_(?:meth|repr)|5A_NYGTCCCYCCCCAAANMN_eDBD_(?:meth|repr)|(?:1(?:6_NANTGTTAACAGAGCCTCN_FL|_NYRCACACMCTGMAAMN_eDBD)|4_NYGCACACMCTGMAAMN_eDBD)_meth|23_NYCATGTGCTAATTACAMN_eDBD|16_NANTGTTAACAGAGCCTCN_FL|31_GCATAACKGCCCTGCKKCN_FL|1_NYRCACACNCTGMAAMN_eDBD)|NF384_TTTTTNNNNNNNNNNNNAAAAA_eDBD_(?:meth|repr)|(?:(?:NF(?:580_(?:NRTTATGTTAAAWWNYTACCNYN|MCTACCCYNNNMCTACCCY)|784_STACYTACCKY)|NF740_NYGCCCCCCCCAC)|FP41_NGCTAACTCTCCRCR)_FL_(?:meth|repr)|(?:BTB(?:43_NGTGCCNNNNNNNYAGCAC|20_NYAAYGTATRK)|BTB(?:32_NRTACAGTNNNACTGTA|12_NGCTGNNCCGCG)Y|NF(?:713_N(?:AGAAAAAAGACWR|MGACGACTGCCAC)GAAA|174_NGNCRATCACTYGNC|4(?:54_(?:NRGCGCCN|TRGCGCC)GGCGCY|10_NYANCCCATAATA)|385D_NCGTCGCGACG|263_NGTGCTCCC))N_eDBD_(?:meth|repr)|(?:(?:NF(?:177_NTYGRTCKNNNNNNNNAGTCAT|345_TTGCAACNNNNNCAACYGKAC|250_NTAGGCCYA)|(?:NF76_NYYWCCCAYAATGCANYGC|IC1_NMCCMCCCGCYGY)G|FP42_NGRCHGCCATMTTG|BTB2_NTTTMCGGTWA)N|(?:IC(?:3_NGACCCCCC|5_NGACCCCCY)GCTGYGM|BED1_NTRTCGCGAYAT))_eDBD|(?:BTB22_NKCACTANNNTAGTG|NF343_NYGCTTCACCNCGGY)MN_eDBD|NF(?:660_NYTGATNNCCCAYCCTRN|(?:(?:(?:444_NCRTCCCCCTCCCCC|7(?:5A_NGCTTTTCCCACA|04_NRCCGGCCGGY)|32_NYGTAACNYGAYAC)N|787_TGCCTCMGTTTMCCY)|821_NRGACRGACRGACRN))_FL|(?:BTB(?:1(?:4_NYGCRCGTGCACGYG|8_NWTCCAGATGTK)|7A_NCGACCMCCG)|NF(?:2(?:74_NRTRTGAGTTCTCRY|96_NASTGGWCAS)|449_NTCGCGNGCMARCA)|NF(?:282_NTTCCCMYNACA|140_NRCAATTCCGCT)C|FP1_NTTTTATACCCAGC)N_eDBD|NF771_NRCGCTAACCATTRN_eDBD|NF7(?:5A_NGCTTTTCCCACMN|40_NYGCCCCCCCCAC)_eDBD|BTB(?:14_NTGCRCGTGCACGYG|26_NMTCYAGAAAA)N_FL|NF771_NRCGCTAACCATTRN_FL|(?:NF5(?:01_NSSCGACGCGAACM|97_NGCCGCCATYTTG)|IC(?:1_NMCCM|3_NRCCC)CCYGCTGYG)N_FL|BTB(?:45_NCACCTATAK|7B_NCGACCMCC)N_eDBD)|(?:(?:(?:(?:HSF5_YNGAANNNNNNNNNNNNNAACRTTCYR|IRF3_NCNGTTTCCNGGAAACYGAAAS|P(?:RDM4_YRRCRGTTTCRAGGGTTACC|OU3F(?:[24]|1)_NTATGCWAATKAG)|P(?:OU3F1_TAATTNNNNNNNAA|ROP1_TAAYNTCG)TTA|UBP1_AWCCGGNNNNNNCCGGWT|BCL6B_RYGTAATCTAGGAATW|(?:HSF5_AACRTTCTAGAAYGY|POU4F3_ATNAATWATGCA|OLIG(?:3_AMCAGCTGT|2_AMCATATGK))T|(?:L(?:EF1_WCATCGNNNCGCTG|MX1B_YTCGTTA)|GATA6_WGATAACGATC)W|GLI(?:2_RGACCACCCACG|3_RGACCACCCACR)WWG|ATF4_GGATGATGTCATCC|SREBF(?:1_RTCA(?:CMCC|GGTG)AY|2_ATCA(?:CMCC|GGTG)AY)|E2F2_NCGCGCGCGCM|CREB1_NRTGAYGTN|NANOG_TTAACGA|EN2_MTCGTTANY)_eDBD|(?:(?:(?:(?:(?:(?:(?:(?:(?:KLF11_NMCACGCCCNNNNCACGCCCMC|CREB3L4_YGCCACGTGGCA|T(?:CF7_(?:WCATCGRGRCGCTGW|ASATCAAAS)|GIF[12]_TGACANNTGTCA)|DMRT(?:A2_NNTTGW|3_NWWTTGN)TACATT|ARGFX_YTAATCTAATTAG|(?:PKNOX2|MEIS3)_TGACANNTGTCA|B(?:HLHE23_ANCATA|ARHL2_NTAAT)TGNY|(?:BHLHE22_ANCATATGN|OLIG2_AACAGCTGT|ATOH1_ANCAGCTGN|ATOH1_ANCATATGN|ATOH7_ANCATATGN)Y|MEIS2_TGACANNYGTCA|BHLHE41_GTCACGTGAC|MEF2[BD]_CCWWATWWRG|SNAI1_NRCAGGTGYR|H(?:ES5_GGCACGTGY|OXB6_YTAATTR)Y|HES1_GGCRCGTGNS|LHX9_CYAATTAR|ISX_CTAATTAN)_e|(?:(?:RORB_NAWNTRGGTCRTGACCYANW|TBX20_NAGGTGTGANNNTCACACC|PAX7_NNATTMGTCACGS|(?:ELF4_NATGCGGAA|OSR1_NGCTACY)G)T|FOXB1_NWNWGTMAATATTRACWYW|(?:GFI1_NMAATCACNGCNNNNCACT|EGR1_NMCGCCCACGC)M|(?:N(?:R(?:1D[12]_NAWNTRGGTCANTRGGTC|(?:5A2_NYCAA|2C2_NR)GGTC)|KX2\-3_NCCACTTR)|R(?:ORC_NWWN|ARA_)NRGGTCANNRGGTC|(?:(?:(?:(?:PPARD_NRRGGTC|RARG_NRGGTCA)|RXRA_NRGGTC)|THRB_NRGGTC)A|ESRRB_NYC)AAGGTC|HNF4A_NRGGTCAAAGGTC|(?:PAX3_N(?:SGTCACGSNN|TAATYG)|VSX2_YTA)ATT|(?:(?:POU4F1_NTNNATWAT|(?:ATF6_NGRTGACGTG|EGR4_NMCGCCCAC))G|FOX(?:I1_NWWNYG|(?:(?:C2_NWAN|Q1_NTAY)R|(?:J3|O4)_NYG))TAAA)C|POU3F2_NTATGCGCAT|TBX(?:(?:15|[36])|21)_NAGGTGTG|(?:NKX6\-2_NY|HOX(?:B[57]_NY|A2_NY|D4_NY)|PRRX2_NY|(?:HOXD1_N|EMX2_Y|PDX1_Y)T|LMX1A_YT|(?:(?:GBX2|EN1)|DLX6)_NY|M(?:SX2_NC|NX1_NY)|TLX2_NC|BSX_NY|RAX_YT)AATT|(?:PHOX2(?:A_C|B_N)|HOX(?:(?:A7|B[28])|D8)_N|ALX4_C|DRGX_Y|E(?:VX|N)2_N|EVX1_N|VAX1_N|NOTO_N|ARX_C)YAATT|(?:ISL2_SCAC|LBX2_CTCG|BSX_NTCG)TT)A|BACH2_NWANCATGASTCATSNTW|(?:NFATC(?:2_NTTTCCRNNNN|3_NTTTCCR)YGGA|(?:HSFY[12]_NTTCGAANNNTTC|TBX18_NRAGGTGT)G|(?:E2F(?:3_NTTTTGGCGCCA|8_NTTTCCCGCC)|HOX(?:(?:(?:(?:C12_GGT|A11_RGY)AA|B(?:13_NC|9_G)TCG)|(?:A11|C12)_NRTCG)TA|D(?:1(?:3_NCC|0_GY)AATA|13_NCTCGTA|12_NRTCGT|10_RTCGTA|9_RTCGTA)))A)AA|(?:PAX(?:2_NSGTC|4_NTY)ACGCWTSANYGNN|PPARD_NRRGGTCRTGACCY|T(?:HRB_NRRGGTCRTGACCY|CF21_NACCATATGK|CF21_NAACAGCTGY|EF_NRTTAYGTAA)|R(?:(?:AR[AG]_NRGGTCR|XRB_NRGGTCR)|ORC_NRGGTCR)TGACC|MSGN1_NRCCAWWTGK|MESP2_NAMCATATGK|ATF(?:6(?:B_NRTGAY|_NRTGAC)GTC|2_NRTGAYGTC)A|CEBP[BD]_NRTTGCGYAA|MYF6_(?:CGTCANNTGT|NAACANNTGW)|ASCL1_NRCAGCTG|HES(?:2_GGCR|7_GGCA)CGTG|SIX2_NCGTATCR)Y|TFCP2L1_NCCGGNNNNNNCCGG|(?:MAFG_NYGCTGA(?:YR|S)TCAGC|GATA4_NWGATAAS|ARGFX_NCTAATTA|NR4A2_NAAAGGTC)R|(?:RFX(?:3_NGTTGCCATGGC|[14]_NGTTRCCATGGY)AA|NR3C1_NGWACANNNYGTW|MAF[AG]_NWWWNTGCTGA|TFAP2B_NGCCNNNGG|SOHLH2_NGCACGTG)C|S(?:KOR[12]_NWNNKKTAATTAA|OX(?:1(?:2_ACCGAACAAT|4_NGAACAATG)|9_MGAACAATR|8_AGAACAATG|30_GAACAAT)|IX4_NCGTATCAT|HOX_CYAATTA)|SP(?:1_NWRG|[89]_N)CCACGCCCMY|KLF14_NRCCACGCCCMY|POU2F2_NTATGCWAAT|BHLHA15_NMCA(?:GC|TA)TGK|NFATC3_NAYGGAAAM|(?:NKX3\-[12]_NCCAC|HMX2_NCAM)TTAA|SP3_NRCCMCGCCCMY|(?:(?:HOXA6_NG|LBX2_NC)YAATT|RARA_NRRGGTC)AN|(?:KLF(?:(?:(?:(?:16_N|2_NR)CCACR|4_NRCCMCG)|5_NMCACG)|6_NRCCACG)C|DMBX1_NTAAT|PITX(?:[12]|3)_NTAAT)CC|TCF12_NCACSTG)N_e|(?:N(?:HLH1_NKGNMKCAGCTGCGYCM|R2F[16]_NRGGTCAAAGGTCA)|FLI1_NACCGGATATCCGGT|MAFF_NYGCTGASTCAGCR|ERG_NACCGGATATCCGGT|(?:HOX(?:(?:A13_NCTCG|C1[01]_NRTCG)TAAA|(?:A10_NGY|C1(?:0_N|1_R)GY)AATAAA|D9_GYAATAAA|A5_NYAATT)|(?:(?:(?:LMX1B_NWWYT|DLX[3-5]_NY|MSX1_NC)AA|ISL1_SCAC)|(?:ALX3_C|DLX2_N|E(?:MX1_N|SX1_Y))YAA)TT)A|EL(?:F2_NATG|K1_NAC)CGGAAGT|ESRRA_NYCAAGGTCA|GSC_YTAATCC)N_e|N(?:R2F1_NRGGTCRNTGACCYN|EUROG2_RNCATATGNY)_e|(?:CREB3L1_TGCCACGTGGCA|T(?:GIF2LX_TGACANNTGTCA|FAP4_A(?:NCATATGN|WCAGCTGW)T)|PKNOX1_TGACANNTGTCA|IRF5_NYGAAACCGAAACY|NEUROG1_RNCATATGNY|LEF1_ASATCAAAS)_e|(?:IRF8_NYGAAASYGAAAS|OVOL2_NWWCCGTTAYN|MYO(?:D1_(?:NAA|YGT)CANNTGT|G_(?:NAA|CGT)CANNTGT)|(?:CEBPG_NRTTGCGY|DBP_NRTTAYGT)AA|(?:CREB5|BATF3)_NRTGAYGTCA|JDP2_NRTGAYGTCA|MSC_NRNCATATGN|ASCL2_NRCAGCTG|HEY2_NGCACGTG)YN_e|(?:(?:HOXA10_NGTCGTAAAAN|(?:(?:ELK3_NACCGGAAGTN|OLIG3_ACCATATGKT)|DLX1_NYAATTAN))|PBX1_KTGATTGAYR)_e|(?:ATF3_NRTGAYGTCA|MSC_NRACAGCTGT)YN_e|S(?:NAI2_NRCAGGTGCR|IX1_NSRTATCRYN)_e|(?:MAF_NYGCTGA|OTX1_NTAATC)CN_e)|(?:KLF13_NRCCACGCCCMYN|GATA5_WGATAACGATCT|PROP1_TAATTNNATTA|(?:GATA5_NWGATAASR|LHX4_NTAATTA)N|HEY1_NGCACGTGYN)_e)DBD|(?:(?:FOXA(?:1_NWR|3_NWN)WGTMAATATTKRYNYW|(?:TBX20_N(?:AGGTGTKARGGYGTK|TNACRCCTANGTGTG)|FOXA3_NSYTAWGTAAACAA|(?:PAX7_NSGTCACGSNNR|MEOX[12]_NTCG)TT|HOX(?:D(?:10_NG(?:YAA|TCG)|9_GTCG)TA|C9_G(?:YAA|TCG)TA)AA|HMX2_NCCAMTTA|(?:HOX(?:A2|D4)_NTM|(?:MEOX[12]_NY|H(?:ESX1_CT|OX(?:(?:B5|A1)_N|D3_Y)T)|GBX2_NC)A|(?:V(?:SX(?:2_SY|1_C)|AX2_N)|LHX(?:5_S|8_C))YA|PRRX2_CYA)ATT)A|POU5F1_NWWTATGCTAATKAR|N(?:FI[BC]_NTTGGCNNNNTGCCAR|(?:KX(?:2\-(?:3_NNCACTTR|8_NNCACTTS)|6\-2_NTCATT)|R5A1_NYCAAGGTC)A)|ETV7_NMGGAARNNYTTCCK|PAX7_NNATTCGTCACGST|RXRG_NRGGTCAAAGGTCA|MAF_NYGCTGA(?:YG|S)TCAGCR|TFAP2A_NSCCYNRGGS|(?:EGR3_NMCGCCCACG|FOXL2_NAYRTMAA)CA|VENTX_NGYAATTAG|HOX(?:A9_RTCGTAA|B7_NGTAATT)AN|TEAD2_NRCATTCCW|RHOXF2_NTAATCC|PITX[12]_YTAATCC|(?:OTX2|CRX)_NTAATCC)N_F|(?:N(?:HLH1_NKGNMKCAGCTGCGYCM|R2F[16]_NRGGTCAAAGGTCA)|FLI1_NACCGGATATCCGGT|MAFF_NYGCTGASTCAGCR|ERG_NACCGGATATCCGGT|(?:HOX(?:(?:A13_NCTCG|C1[01]_NRTCG)TAAA|(?:A10_NGY|C1(?:0_N|1_R)GY)AATAAA|D9_GYAATAAA|A5_NYAATT)|(?:(?:(?:LMX1B_NWWYT|DLX[3-5]_NY|MSX1_NC)AA|ISL1_SCAC)|(?:ALX3_C|DLX2_N|E(?:MX1_N|SX1_Y))YAA)TT)A|EL(?:F2_NATG|K1_NAC)CGGAAGT|ESRRA_NYCAAGGTCA|GSC_YTAATCC)N_F|(?:THRB_NYGACCTNNNNYGACCT|IRF9_NYGAAASYGAAAC|R(?:ARB_NRGGTCRT|XRG_NRGGTCAY)GACC|FOSL1_NRTGAYGTCA|ATF2_NRTGAYGTMA|JDP2_NRTGASTCA|MAFG_TGCTGACG)YN_F|TFCP2_AWCCGGWTNNAWCCGGWT_F|(?:F(?:ERD3L_GYNNCATATGNNAC|OSL1_RATGAYACG)|S(?:OX8_ACAATNNNNNNATTGT|NAI3_NRCAGGTGCR)|(?:POU4F3_ATGCATWATGCA|DMRTA1_WWTTGWTACAT)T|BHLHE23_ANCATATGNT|HOXA13_NCCAATAAAAN|(?:MEIS2_TGACANNTGTC|LHX6_TRATTGCAATY|DMRTC2_GAACGATAC)A|PHOX2B_TAATTAGATTA|NEUROD2_RMCATATGYY|MAFG_TGCTGANNNTGCR|I(?:RF2_YGAAASYGAAAS|SX_CTAATTAR)|MIXL1_TAATYNRATTA|ALX1_TAATTAGATTA|HOXB4_RTMATTAR|LHX9_CYAATTAN)_F|(?:LEF1_WCATCGRGRCGCTGW|DMRTC2_WWTTGNTACATN)_F|P(?:OU4F3_NTNAATWATGC|AX7_NTAATYGATT)AN_F|(?:CREB3L1_TGCCACGTGGCA|T(?:GIF2LX_TGACANNTGTCA|FAP4_A(?:NCATATGN|WCAGCTGW)T)|PKNOX1_TGACANNTGTCA|IRF5_NYGAAACCGAAACY|NEUROG1_RNCATATGNY|LEF1_ASATCAAAS)_F|(?:IRF8_NYGAAASYGAAAS|OVOL2_NWWCCGTTAYN|MYO(?:D1_(?:NAA|YGT)CANNTGT|G_(?:NAA|CGT)CANNTGT)|(?:CEBPG_NRTTGCGY|DBP_NRTTAYGT)AA|(?:CREB5|BATF3)_NRTGAYGTCA|JDP2_NRTGAYGTCA|MSC_NRNCATATGN|ASCL2_NRCAGCTG|HEY2_NGCACGTG)YN_F|KLF15_NCCMCGCCCMYN_F|ESRRG_NYCAAGGTCAN_F|SIX1_NSRTATCRYN_F|BARHL2_NTAATTGN_F)L)|(?:ESR1_NAGGTCANNNYGACCT|MAFF_NYGCTGAYRTCAGCR)N_FL)|NRL_NWWWNTGCTGACN_FL)|NR4A1_NAAAGGTCAN_eDBD)|(?:(?:(?:(?:(?:(?:ELF3_ACMAGGAAGNNNNNNNNNWWWW|GATA3_WGATAAC?GATC)|LMX1B_CTCGTTA)W|YY1_NGCCATYTTTGRCNNWNYGTGCT|NEUROG2_RMCATATGYY|MIXL1_TAAYNKCGTTA|PROP1_TAATTRCGTTA|HOXB4_RTCGTTAR)|(?:(?:(?:(?:(?:(?:CREB(?:3L1_TGCCACR|1_NRTGAYG)TCAY|E(?:(?:LF(?:5_NANNA|1_NATGM)|LF1_NACCM)|TV4_NRCM)GGAAGT|FLI1_NACMGGAART)|(?:ETV4_NCAGGAAGGAAGT|MSX1_NTCGTTA))|(?:H(?:SF[12]_NGAANNTTCYRGA|OX(?:(?:(?:A5_R|B[57]_R)|A2_R)|D4_R)TCGTT)|(?:(?:GBX2_NT|DLX[3-5]_NT)|(?:ALX3_N|LHX9_M|VSX1_N)T)CGTT)A)|NKX2\-3_NTCGTTGA)|(?:ATF3_NRTGAYGTCA|MSC_NRACAGCTGT)Y)N|SNAI2_NRCAGGTGCR))|(?:(?:RUNX3_NWAACCACRNNNACCACRA|FOXA1_NSYTAWGTAAACAA|P(?:OU5F1_NTATGCGCA|RRX2_MTCGT)T|CDX4_NGYAATAAA|(?:(?:HOX(?:A1_R|C[48]_R|D3_R)|LHX(?:5_N|6_M|8_M|4_Y)|VSX2_N|ISX_M)TCG|LHX6_CYAA)TT)A|(?:PAX(?:8_NSGTCRCGCWTSANYGN|6_NYACGCNYSANYGM)N|NR2F1_NRGGTCRNYGACC|SIX2_MCGTATCR)Y|POU6F1_NTAATGAKATGCR|ONECUT2_NTATTGATTW|ETV7_NYTTCCNGGAAR|(?:DMRT1_NNTYGNWACA|ERG_NACMGGAAR|JUN_NATGA[CS]TCA)T|SPIB_RAWWGRGGAAGT|(?:CREB3_NGCCACR|FOSL1_NATGAS)TCAY|CREB3_NRTGAYGTCAY|ELF2_NACCAGGAAGT|XBP1_N(?:KMCACR|RTGAYG)TCAY|CDX4_NGTCGTAAAN|NKX2\-5_NTCGTTGA|E(?:LK4_NRCMGG|TV1_NACMGK)AWGT|USF1_RNCAYGTGAC|KLF3_NRCCACGCCC|RARB_NAAAGGTCR)N)|(?:POU6F1_NTATGYTAATKA|ONECUT1_NTATTGATCS|YY(?:1_NGCSGCCATY|2_NKCSGCCATT)TT)GN)_FL)|(?:(?:(?:(?:CREB(?:3L1_TGCCACR|1_NRTGAYG)TCAY|E(?:(?:LF(?:5_NANNA|1_NATGM)|LF1_NACCM)|TV4_NRCM)GGAAGT|FLI1_NACMGGAART)|(?:H(?:SF[12]_NGAANNTTCYRGA|OX(?:(?:(?:A5_R|B[57]_R)|A2_R)|D4_R)TCGTT)|(?:(?:GBX2_NT|DLX[3-5]_NT)|(?:ALX3_N|LHX9_M|VSX1_N)T)CGTT)A)|NKX2\-3_NTCGTTGA)|SPDEF_NAMCAGGATGT)N_eDBD))|(?:(?:HSFY[12]_NCATTCYAAWCATTCY|FOXE1_NMYTAAAYAAAC)AW|(?:TBX20_NAGGTGTGAASGYGTG|MAFA_NTGCTGA(?:YG|N)TCAGC|POU(?:2F2_NY|3F1_NT)ATGCGCAT|(?:NKX3\-[12]_NT|(?:LHX1|DLX6)_NT|M(?:SX2|NX1)_NT)CGTT|HOXB1_GTAATT|(?:HOXA4_R|(?:(?:GSX2_S|ISX_C)|VSX2_Y))TCGTT|(?:HOX(?:B(?:1_M|6_R)|(?:A7|B[28])_R|D[18]_R)|LMX1A_C|GSX1_M|ALX4_N|EVX2_S|EVX1_R|PDX1_R|SHOX_S|RAX_C)TCGTT|UNCX_NTCGTT)A|(?:IRX3_NACGYRNNNNNNYGC|(?:ETV5_NCAGGAA|E(?:LF4_NAC|TV5_NR)CM|GABPA_NACM|FEV_NACM)GGAA|ETV1_NACMGGAW)GT|(?:M(?:AX_NCATGTGNNNNNCAT|LX_NCAY)G|FIGLA_NMCACC|TCF4_NCACC)TG|(?:BCL6(?:B_NYGCTTTCTAGGA|_N(?:TGCTT|YGTAA)TCTAGGA)A|JUND_N(?:RTGAC|ATGAS)TCA|ERG_NACAGGAAR)T|(?:CREB3L1_NTGCCACGYGTA|TFAP2C_NGCCYNRGG)C|(?:PAX9_NSGTCRCGCWTSANY|POU3F[14]_NTAATGAKATGC|GLIS1_KACCCCCCACGWW|GLIS2_RCCCCCCRCGWW)G|POU(?:3F(?:2_NTAATKAK|1_NTAATTW)ATGCG|1F1_NTAAT(?:GAK|TT)ATGCG|3F2_NTAATTWATGCG|2F3_NYATGCGCATR)|(?:N(?:R2F6_NRGGTCRNYGACC|PAS2_NMCAYGYG)|(?:CREB3L4_(?:YGCCACR|NRTGAYG)|(?:CREM|ATF7)_NRTGAYG|FOSB?_NRTGAYG)TCA|(?:ONECUT3_NT|CUX1_NY)ATTGAT|TFE(?:[3B]|C)_RNCAYGTGA|J(?:UNB|DP2)_NATGASTCA|SIX(?:3_NS|6_NY)RTATCR)Y|(?:NFATC[12]_NTTTCCGCGGA|HSF4_NGAANNTTCYRG|CDX1_NGTCGTAA)AA|ONECUT2_NTATTGATY|KLF1(?:5_RCCACGCCCMY|7_NGCCACRCCCW)|CDX2_NRTCGTAAANN|MYBL2_NTAACSGTTA|S(?:PIB_RWWGRGGAAGT|CRT[12]_NGCRACAGGT)|TBX1_NNAGGTGTGAN|NR4A1_NAAAGGTCR|GCM1_RTRNGGGT)N_eDBD)|ARNTL_RTCAYGTGMN_eDBD)_meth|(?:(?:FOXP1_NTGTTTRNNNNNNNNNNNNNNNNWCAA|RXRB_NRGGTCAAAGGT|TCFL5_NCACGYG)CA|(?:T(?:BX19_NANGTGTKA|_NANGTGTGAN)NNNTNACACC|GRHL1_NAACCGGT|OSR2_NGCTACYG)T|FOXA2_NWNWGTMAATATTKRYNYW|(?:PAX4_NATTTCACGCWTSANYGNN|(?:CEBPE_NRTTGCGYA|ATF6B_TGCCACGTC)A|HAND2_AACACCTG)Y|PAX1_NSGTCACGCWTSANYG|HNF4A_NRG(?:GTCAAAGTCCR|TCCAAAG(?:GT|TC)CR)|(?:P(?:AX(?:7_NSGTCACGSNWR|4_NYACGCTAA)T|OU3F4_NTATGCGCA)T|N(?:FATC4_N(?:TTTCCRYGG|AYGGA)AA|KX6\-3_NTMATTA)|T_NTCACACNTANGTGTG|(?:E2F7_NTTTCCCGCC|HOXC13_NCTCGTA)AA|(?:LBX2_CTMAT|VSX1_Y)TAATT|FOXK1_NWYGTAAAY|RFX7_NGTTGCY|HMX1_NCAMTTA)A|(?:N(?:R3C2_NGNACRNNNYGTN|FKB2_NGGGGAWNYMC)|(?:RFX3_NGTTGCCWAGCA|NFAT5_NYGGAAANNT)A|FOXO3_NTCCCCACA|GSC2_YTAATC)C|CUX2_NTGATCGATYR|NFE2_NATGASTCAT|BARHL1_NTAATTG)N_eDBD|(?:(?:(?:(?:CPSF4_MCCNCCNCCNCCCCNCCCCCNCCA|N(?:EUROD1_AAWTANNNNNNCATATGN|FIX_NTTGGCNNNNTGCCAR|(?:KX2\-5_NCCACTTR|R2E1_NAAAGTC)A)|IRF3_NSGAAANSGAAASSGAAAS|(?:THRB_NTGACCTNNNNNA|RARB_NRGGTCANNR)GGTCA|TFAP2E_(?:TGC|NG)CCNNNGGC|CREB3_NGCCACGTGKM|(?:FOXI1_NANGTAAACA|HOXC4_NTMATT)A|MBNL2_NYGCTTYGCTT|POU6F1_NTAATKAGS|HOXA9_GYAATAAAN|SOX14_CCGAACAAT|BATF_NMATGACAC|RHOXF1_NGGATCA)N|SOX10_AACAATNNNNNNATTGTT|(?:LIN28B_CGCGANNNNNCAGC|MEF2B_TGTTACCATATNNG)G|FERD3L_GYNNCAGCTGNNAC|IRF6_ACCGAWACY)|(?:KLF13_NRCCACGCCCMYN|GATA5_WGATAACGATCT|PROP1_TAATTNNATTA|(?:GATA5_NWGATAASR|LHX4_NTAATTA)N|HEY1_NGCACGTGYN))|SNAI1_NRCAGGTGCR)_FL_(?:meth|repr)|(?:(?:NFATC3_NYGGAAANNNNNNNTTTCC|RFX5_NGTTGCYRNNNGTTGCY)R|ETV3_NNAGGAANNNNNNNTTCCTN|(?:RORB_NAWNTRGGTCANTRGGTC|NFATC1_NTTTCCRNNNNYGGAA|NR6A1_NTCAAGKTCAAGKTC|RFX5_NYRRCAACSGTTGCY|FOX(?:J2_NWWGTTGTAA|A1_NWRTGTAM)AY|(?:POU2F2_NTGCATATG|FOXC2_NYAAAYAAA)C|(?:EOMES|TBX2)_NAGGTGTG)A|(?:(?:NR5A2_NCAAGGTCRNGACCT|(?:PRDM1_NRGNGAAA|DPF1_NCTATAG)G)T|POU1F1_NTATGCWAATKA|SOX18_NACAAT)G|(?:H(?:OXD11_NRTCGTAAAANN|MBOX1_NCTAG)|PRRX2_NTCG)TTA|(?:NR(?:1I2_NYGAACYNNNYGAA|2C1_NRGGTCRYGAC)|SP2_NYWAGYCCCGCCCM)CY|MTF1_NYTTTGCACACGRYNY|E(?:2F2_NWTTTGGCGCCAWWW|TV3_NACCGGATATCCGGT)|P(?:AX3_NYRATTMGTCACGS|OU2F3_NTATGCWAA)T|(?:(?:RFX2_NGTTRCCATGGY|FOXD3_NYWAYRTA)AA|HIC1_NRTGCCAM|DPRX_NGMTAATC)C|SOX4_GAACAAAGR)N_eDBD_(?:meth|repr)|GFI1B_NMAATCACNGCANNNCACTMN_eDBD_(?:meth|repr)|(?:(?:BCL11B_GTGAACRNNNNNNYTACA|GATA1_GATAANNNNNTTAT)C|IRF6_RGTWTCGNNNNNNYGAWACY|NR5A2_YGACCTTGNNNCAAGGTCR|S(?:OX10_AACAATNNNNNATTGTT|RF_CCWTGTWNGG)|HOXA13_NCCAATAAAAM|YBX1_YGTWCCAYC)_eDBD_(?:meth|repr)|(?:(?:(?:KLF11_NMCACGCCCNNNNCACGCCCMC|CREB3L4_YGCCACGTGGCA|T(?:CF7_(?:WCATCGRGRCGCTGW|ASATCAAAS)|GIF[12]_TGACANNTGTCA)|DMRT(?:A2_NNTTGW|3_NWWTTGN)TACATT|ARGFX_YTAATCTAATTAG|(?:PKNOX2|MEIS3)_TGACANNTGTCA|B(?:HLHE23_ANCATA|ARHL2_NTAAT)TGNY|(?:BHLHE22_ANCATATGN|OLIG2_AACAGCTGT|ATOH1_ANCAGCTGN|ATOH1_ANCATATGN|ATOH7_ANCATATGN)Y|MEIS2_TGACANNYGTCA|BHLHE41_GTCACGTGAC|MEF2[BD]_CCWWATWWRG|SNAI1_NRCAGGTGYR|H(?:ES5_GGCACGTGY|OXB6_YTAATTR)Y|HES1_GGCRCGTGNS|LHX9_CYAATTAR|ISX_CTAATTAN)_e|(?:(?:RORB_NAWNTRGGTCRTGACCYANW|TBX20_NAGGTGTGANNNTCACACC|PAX7_NNATTMGTCACGS|(?:ELF4_NATGCGGAA|OSR1_NGCTACY)G)T|FOXB1_NWNWGTMAATATTRACWYW|(?:GFI1_NMAATCACNGCNNNNCACT|EGR1_NMCGCCCACGC)M|(?:N(?:R(?:1D[12]_NAWNTRGGTCANTRGGTC|(?:5A2_NYCAA|2C2_NR)GGTC)|KX2\-3_NCCACTTR)|R(?:ORC_NWWN|ARA_)NRGGTCANNRGGTC|(?:(?:(?:(?:PPARD_NRRGGTC|RARG_NRGGTCA)|RXRA_NRGGTC)|THRB_NRGGTC)A|ESRRB_NYC)AAGGTC|HNF4A_NRGGTCAAAGGTC|(?:PAX3_N(?:SGTCACGSNN|TAATYG)|VSX2_YTA)ATT|(?:(?:POU4F1_NTNNATWAT|(?:ATF6_NGRTGACGTG|EGR4_NMCGCCCAC))G|FOX(?:I1_NWWNYG|(?:(?:C2_NWAN|Q1_NTAY)R|(?:J3|O4)_NYG))TAAA)C|POU3F2_NTATGCGCAT|TBX(?:(?:15|[36])|21)_NAGGTGTG|(?:NKX6\-2_NY|HOX(?:B[57]_NY|A2_NY|D4_NY)|PRRX2_NY|(?:HOXD1_N|EMX2_Y|PDX1_Y)T|LMX1A_YT|(?:(?:GBX2|EN1)|DLX6)_NY|M(?:SX2_NC|NX1_NY)|TLX2_NC|BSX_NY|RAX_YT)AATT|(?:PHOX2(?:A_C|B_N)|HOX(?:(?:A7|B[28])|D8)_N|ALX4_C|DRGX_Y|E(?:VX|N)2_N|EVX1_N|VAX1_N|NOTO_N|ARX_C)YAATT|(?:ISL2_SCAC|LBX2_CTCG|BSX_NTCG)TT)A|BACH2_NWANCATGASTCATSNTW|(?:NFATC(?:2_NTTTCCRNNNN|3_NTTTCCR)YGGA|(?:HSFY[12]_NTTCGAANNNTTC|TBX18_NRAGGTGT)G|(?:E2F(?:3_NTTTTGGCGCCA|8_NTTTCCCGCC)|HOX(?:(?:(?:(?:C12_GGT|A11_RGY)AA|B(?:13_NC|9_G)TCG)|(?:A11|C12)_NRTCG)TA|D(?:1(?:3_NCC|0_GY)AATA|13_NCTCGTA|12_NRTCGT|10_RTCGTA|9_RTCGTA)))A)AA|(?:PAX(?:2_NSGTC|4_NTY)ACGCWTSANYGNN|PPARD_NRRGGTCRTGACCY|T(?:HRB_NRRGGTCRTGACCY|CF21_NACCATATGK|CF21_NAACAGCTGY|EF_NRTTAYGTAA)|R(?:(?:AR[AG]_NRGGTCR|XRB_NRGGTCR)|ORC_NRGGTCR)TGACC|MSGN1_NRCCAWWTGK|MESP2_NAMCATATGK|ATF(?:6(?:B_NRTGAY|_NRTGAC)GTC|2_NRTGAYGTC)A|CEBP[BD]_NRTTGCGYAA|MYF6_(?:CGTCANNTGT|NAACANNTGW)|ASCL1_NRCAGCTG|HES(?:2_GGCR|7_GGCA)CGTG|SIX2_NCGTATCR)Y|TFCP2L1_NCCGGNNNNNNCCGG|(?:MAFG_NYGCTGA(?:YR|S)TCAGC|GATA4_NWGATAAS|ARGFX_NCTAATTA|NR4A2_NAAAGGTC)R|(?:RFX(?:3_NGTTGCCATGGC|[14]_NGTTRCCATGGY)AA|NR3C1_NGWACANNNYGTW|MAF[AG]_NWWWNTGCTGA|TFAP2B_NGCCNNNGG|SOHLH2_NGCACGTG)C|S(?:KOR[12]_NWNNKKTAATTAA|OX(?:1(?:2_ACCGAACAAT|4_NGAACAATG)|9_MGAACAATR|8_AGAACAATG|30_GAACAAT)|IX4_NCGTATCAT|HOX_CYAATTA)|SP(?:1_NWRG|[89]_N)CCACGCCCMY|KLF14_NRCCACGCCCMY|POU2F2_NTATGCWAAT|BHLHA15_NMCA(?:GC|TA)TGK|NFATC3_NAYGGAAAM|(?:NKX3\-[12]_NCCAC|HMX2_NCAM)TTAA|SP3_NRCCMCGCCCMY|(?:(?:HOXA6_NG|LBX2_NC)YAATT|RARA_NRRGGTC)AN|(?:KLF(?:(?:(?:(?:16_N|2_NR)CCACR|4_NRCCMCG)|5_NMCACG)|6_NRCCACG)C|DMBX1_NTAAT|PITX(?:[12]|3)_NTAAT)CC|TCF12_NCACSTG)N_e|(?:N(?:HLH1_NKGNMKCAGCTGCGYCM|R2F[16]_NRGGTCAAAGGTCA)|FLI1_NACCGGATATCCGGT|MAFF_NYGCTGASTCAGCR|ERG_NACCGGATATCCGGT|(?:HOX(?:(?:A13_NCTCG|C1[01]_NRTCG)TAAA|(?:A10_NGY|C1(?:0_N|1_R)GY)AATAAA|D9_GYAATAAA|A5_NYAATT)|(?:(?:(?:LMX1B_NWWYT|DLX[3-5]_NY|MSX1_NC)AA|ISL1_SCAC)|(?:ALX3_C|DLX2_N|E(?:MX1_N|SX1_Y))YAA)TT)A|EL(?:F2_NATG|K1_NAC)CGGAAGT|ESRRA_NYCAAGGTCA|GSC_YTAATCC)N_e|N(?:R2F1_NRGGTCRNTGACCYN|EUROG2_RNCATATGNY)_e|(?:CREB3L1_TGCCACGTGGCA|T(?:GIF2LX_TGACANNTGTCA|FAP4_A(?:NCATATGN|WCAGCTGW)T)|PKNOX1_TGACANNTGTCA|IRF5_NYGAAACCGAAACY|NEUROG1_RNCATATGNY|LEF1_ASATCAAAS)_e|(?:IRF8_NYGAAASYGAAAS|OVOL2_NWWCCGTTAYN|MYO(?:D1_(?:NAA|YGT)CANNTGT|G_(?:NAA|CGT)CANNTGT)|(?:CEBPG_NRTTGCGY|DBP_NRTTAYGT)AA|(?:CREB5|BATF3)_NRTGAYGTCA|JDP2_NRTGAYGTCA|MSC_NRNCATATGN|ASCL2_NRCAGCTG|HEY2_NGCACGTG)YN_e|(?:(?:HOXA10_NGTCGTAAAAN|(?:(?:ELK3_NACCGGAAGTN|OLIG3_ACCATATGKT)|DLX1_NYAATTAN))|PBX1_KTGATTGAYR)_e|(?:ATF3_NRTGAYGTCA|MSC_NRACAGCTGT)YN_e|S(?:NAI2_NRCAGGTGCR|IX1_NSRTATCRYN)_e|(?:MAF_NYGCTGA|OTX1_NTAATC)CN_e)|(?:KLF13_NRCCACGCCCMYN|GATA5_WGATAACGATCT|PROP1_TAATTNNATTA|(?:GATA5_NWGATAASR|LHX4_NTAATTA)N|HEY1_NGCACGTGYN)_e)DBD|(?:ELF3_ACCCGGAAGNNNNNNNNNWWWWW_e|NR2F6_NRGGTCRNTGACCYN_e|(?:(?:(?:HSF1_NGAANNTTCNNGAA|ELK3_NTCGTAAATGC)N|LEF1_WCATCGRGRCGCTGW)|DMRTC2_WWTTGNTACATN)_e|P(?:OU4F3_NTNAATWATGC|AX7_NTAATYGATT)AN_e|(?:CREB(?:3L1_TGCC|1_NRTG)ACGTCAY|HSF2_NGAANNTTCNNGAA)N_e|SPDEF_NAMCCGGATGTN_e|E(?:(?:LF(?:2_NACC|1_NATG)|LF1_NACC)|TV4_NRC)CGGAAGTN_e|FLI1_NACCGGAARTN_e)DBD|(?:(?:ESR1_NAGGTCANNNYGACCT|MAFF_NYGCTGAYRTCAGCR)|NRL_NWWWNTGCTGAC)N_eDBD_(?:meth|repr)|(?:(?:PRDM4_YRRCNGTTTCAAGKCYCCC|ATF4_GGATGACGTCATC|GSX1_CTAATTA)C|B(?:CL6B_RYGTAATCGAGGAATW|ARHL2_NTAAACGNY)|G(?:LI2_NGACCACCCACGWYG|SX2_STMATTAR)|POU3F[24]_NTATGCWAATKAN|(?:E2F4_WTTTGGCGCCAWW|GATA6_NGATAACGATC)W|ATF6B_YGCCACGTGGCA|SREBF2_ATCACG(?:CC|TG)AY|OLIG3_ANCAGCTGTT|JDP2_GATGASTCATC|OLIG2_ANCATATGNY)_eDBD|(?:BACH2_NWWNNATGACGTCAYNNWW|(?:(?:RUNX2_NWAACCGCANNNACCGC|HSF4_NGAANNTTCNNG)A|NFATC[12]_NTTTCCATGGAA|(?:POU(?:4F3_NTGCATW|2F2_NTMATT)ATG|FOXG1_NAYRYAAA)C|(?:HOX(?:B(?:13_NCC|9_GY)|C13_NCC)AATA|CDX(?:1_NGYMATA|2_NYAAT))AA|SREBF1_NTCACGTG|HOXA4_RTMATT|HOXB1_STAATT|LHX1_NYAATT|UNCX_KTAATT)A|HSFY2_NCRTTCGAAWCRTTCGAW|(?:P(?:OU3F1_NAATTANNNNNTAA|ROX1_NAAGRCGTC)T|(?:IRX3_NACATGNNNNNNCAT|E(?:LF4_NAC|TV5_NR)CCGGAA|GABPA_NACCGGAA|ETV1_NACCGGAW|ETV2_NRCCGGAA|FEV_NACCGGAA)G|SCRT2_NGCAACAGG|GCM1_RTGCGGG)T|(?:GMEB2_NYACGTANNNTACGT|MAFA_NYGCTGA(?:YG|S)TCAGC|POU3F4_N(?:TAATKAKATGC|ATTATGCAT))R|UBP1_NNCCGGNNNNNNCCGGN|CREB3L1_NTGCCACGTGTAC|BCL6B_NYGCTTTCKAGGAAT|(?:PAX9_NSGTCACGCWTSANY|GLIS1_NACCCCCCACGWM|MYCN_NKCACGTG)G|POU(?:3F(?:(?:2_NTAATKAKATGCA|4_NTAATTWATGCR|1_NTAATTWATGCN)|2_NTAATTWATGCR)|1F1_NTAAT(?:GAK|TT)ATGCR)|FOXD2_NAACAATAAYAWW|POU3F1_NTATGCWAATNN|(?:IRF7_NYGAAANYGAAAN|(?:(?:CREB3L4|(?:CREM|ATF7))_NRTGACGTC|FOSB?_NRTGACGTC)A|ONECUT[13]_NYATCGAT|CLOCK_NMCAYGTG|NPAS2_NMCACGTG|TFE(?:[3B]_N|C_M)NCACGTGA|USF2_MNCACGTGA|SIX3_NSSTATCR)Y|(?:ONECUT2_NTATCGAT|ERG_NACCGGAAR)Y|KLF15_NCCACGCCCMY|TFAP2C_NGCCYNMGGC|TBX1_NWAGGTGTGAR|JUND_NRTGACGTCAT|TCF4_NCACSTG)N_eDBD|(?:ELF3_ACCCGGAAGNNNNNNNNNWWWWW_F|P(?:AX6_NYACGCNTSANYGNNYN|BX1_KTGATTGAYR)_F|N(?:R2F1_NRGGTCRNTGACCYN|EUROG2_RNCATATGNY)_F|(?:CREB(?:3L1_TGCC|1_NRTG)ACGTCAY|HSF2_NGAANNTTCNNGAA)N_F|SPDEF_NAMCCGGATGTN_F|E(?:(?:LF(?:2_NACC|1_NATG)|LF1_NACC)|TV4_NRC)CGGAAGTN_F|FLI1_NACCGGAARTN_F)L|(?:(?:FOXA(?:1_NWR|3_NWN)WGTMAATATTKRYNYW|(?:TBX20_N(?:AGGTGTKARGGYGTK|TNACRCCTANGTGTG)|FOXA3_NSYTAWGTAAACAA|(?:PAX7_NSGTCACGSNNR|MEOX[12]_NTCG)TT|HOX(?:D(?:10_NG(?:YAA|TCG)|9_GTCG)TA|C9_G(?:YAA|TCG)TA)AA|HMX2_NCCAMTTA|(?:HOX(?:A2|D4)_NTM|(?:MEOX[12]_NY|H(?:ESX1_CT|OX(?:(?:B5|A1)_N|D3_Y)T)|GBX2_NC)A|(?:V(?:SX(?:2_SY|1_C)|AX2_N)|LHX(?:5_S|8_C))YA|PRRX2_CYA)ATT)A|POU5F1_NWWTATGCTAATKAR|N(?:FI[BC]_NTTGGCNNNNTGCCAR|(?:KX(?:2\-(?:3_NNCACTTR|8_NNCACTTS)|6\-2_NTCATT)|R5A1_NYCAAGGTC)A)|ETV7_NMGGAARNNYTTCCK|PAX7_NNATTCGTCACGST|RXRG_NRGGTCAAAGGTCA|MAF_NYGCTGA(?:YG|S)TCAGCR|TFAP2A_NSCCYNRGGS|(?:EGR3_NMCGCCCACG|FOXL2_NAYRTMAA)CA|VENTX_NGYAATTAG|HOX(?:A9_RTCGTAA|B7_NGTAATT)AN|TEAD2_NRCATTCCW|RHOXF2_NTAATCC|PITX[12]_YTAATCC|(?:OTX2|CRX)_NTAATCC)N_F|(?:N(?:HLH1_NKGNMKCAGCTGCGYCM|R2F[16]_NRGGTCAAAGGTCA)|FLI1_NACCGGATATCCGGT|MAFF_NYGCTGASTCAGCR|ERG_NACCGGATATCCGGT|(?:HOX(?:(?:A13_NCTCG|C1[01]_NRTCG)TAAA|(?:A10_NGY|C1(?:0_N|1_R)GY)AATAAA|D9_GYAATAAA|A5_NYAATT)|(?:(?:(?:LMX1B_NWWYT|DLX[3-5]_NY|MSX1_NC)AA|ISL1_SCAC)|(?:ALX3_C|DLX2_N|E(?:MX1_N|SX1_Y))YAA)TT)A|EL(?:F2_NATG|K1_NAC)CGGAAGT|ESRRA_NYCAAGGTCA|GSC_YTAATCC)N_F|(?:THRB_NYGACCTNNNNYGACCT|IRF9_NYGAAASYGAAAC|R(?:ARB_NRGGTCRT|XRG_NRGGTCAY)GACC|FOSL1_NRTGAYGTCA|ATF2_NRTGAYGTMA|JDP2_NRTGASTCA|MAFG_TGCTGACG)YN_F|TFCP2_AWCCGGWTNNAWCCGGWT_F|(?:F(?:ERD3L_GYNNCATATGNNAC|OSL1_RATGAYACG)|S(?:OX8_ACAATNNNNNNATTGT|NAI3_NRCAGGTGCR)|(?:POU4F3_ATGCATWATGCA|DMRTA1_WWTTGWTACAT)T|BHLHE23_ANCATATGNT|HOXA13_NCCAATAAAAN|(?:MEIS2_TGACANNTGTC|LHX6_TRATTGCAATY|DMRTC2_GAACGATAC)A|PHOX2B_TAATTAGATTA|NEUROD2_RMCATATGYY|MAFG_TGCTGANNNTGCR|I(?:RF2_YGAAASYGAAAS|SX_CTAATTAR)|MIXL1_TAATYNRATTA|ALX1_TAATTAGATTA|HOXB4_RTMATTAR|LHX9_CYAATTAN)_F|(?:LEF1_WCATCGRGRCGCTGW|DMRTC2_WWTTGNTACATN)_F|P(?:OU4F3_NTNAATWATGC|AX7_NTAATYGATT)AN_F|(?:CREB3L1_TGCCACGTGGCA|T(?:GIF2LX_TGACANNTGTCA|FAP4_A(?:NCATATGN|WCAGCTGW)T)|PKNOX1_TGACANNTGTCA|IRF5_NYGAAACCGAAACY|NEUROG1_RNCATATGNY|LEF1_ASATCAAAS)_F|(?:IRF8_NYGAAASYGAAAS|OVOL2_NWWCCGTTAYN|MYO(?:D1_(?:NAA|YGT)CANNTGT|G_(?:NAA|CGT)CANNTGT)|(?:CEBPG_NRTTGCGY|DBP_NRTTAYGT)AA|(?:CREB5|BATF3)_NRTGAYGTCA|JDP2_NRTGAYGTCA|MSC_NRNCATATGN|ASCL2_NRCAGCTG|HEY2_NGCACGTG)YN_F|KLF15_NCCMCGCCCMYN_F|ESRRG_NYCAAGGTCAN_F|SIX1_NSRTATCRYN_F|BARHL2_NTAATTGN_F)L|(?:(?:TFCP2_AWCCGGWTNNAWCCGGWT|PAX6_NYACGCNTSANYGNNYN)|ESRRG_NYCAAGGTCAN)_eDBD|(?:(?:E(?:T(?:S2_NACCGGANNNNNNTCCG|V1_NACCGKAW)|LK4_NRCCGGAW)|HES6_GGCACGT|GCM2_RTGCGG)GT|(?:PAX8_NSGTCACGCWTSANYGNN|M(?:LX_YNCACGTGM|AX_RNCACGTG)|SIX2_MCGTATCA)Y|NHLH2_NKGNMGCAGCTGCGYCM|(?:GMEB1_NKACGTANNNTACGT|E(?:LK|TV)4_NTCGTAAATG)M|FOXA1_NMYTAWGTAAACAAA|E(?:2F1_NWTTTGGCGCCAWWW|RG_NACCGGAART)|POU6F1_NTAATGAKATGYR|ONECUT1_NTATCGATCGN|ONECUT2_NTATCGATCGR|(?:ONECUT2_NTATCGATT|DMRT1_NNTYGNTACA|JUN_NATGACKCA)T|(?:BARX2_NWWAAYC|LHX6_CTA)ATTA|SPIB_RAWWGMGGAAGT|(?:CREB3_NGCCACGTC|USF1_MNCACGTG)AY|CREB3_NRTGACGTCAY|YY(?:2_NKCCGCCATT|1_NGCCGCCATY)TTG|EL(?:F5_NAM|K3_A)CCGGAAGT|(?:FOSL1_NRTGAN|JUN_NATGACG)TCAY|ATF3_NRTGACGTCAY|XBP1_N(?:KMC|RTG)ACGTCAY|RARB_NAAAGGTCA)N_FL|(?:TCF7L1_(?:WCATCGRGRCGCTGW|ASATCAAAS)|KLF17_NMCCACGCWCCCMYY|(?:TGIF2LY_TGACANNTG|(?:BBX_TGAWCNNNGW|DUXA_TRAYNTAA))TCA|BHLHE40_GTCACGTGAC|S(?:OX7_ACAATNNNATTGT|MAD5_YGTCTAGACA)|PTF1A_NYGTCAGCTGNY)_eDBD|(?:(?:FOX(?:P3_NAWTTGTAYGACAAAT|R2_NYRTAWACATAAATNN)|(?:IRF4_NYGAAASYGAAAS|OVOL1_NRWACCGTTATN|HLF_NRTTRYGYAA)Y|(?:EGR2_NMCGCCCACGC|XPA_NCACCTCAC|HOXC8_NTAATT)A|(?:OTX1_NTAATCCN|RARG_NRGGTCA)Y|TEAD1_NRCATWCC|TGIF2_NTGACAG)N|(?:(?:NR2F6_NRGGTCRNTGACCYN|(?:HOXA10_NGTCGTAAAAN|(?:OLIG3_ACCATATGKT|DLX1_NYAATTAN)))|(?:M(?:AF_NYGCTGACNNNGCR|EF2C_CCWWATWWRG)|LHX8_TRATTGCAATYA|KLF12_NRCCACGCCCW)))_FL|(?:ESR1_NAGGTCANNNYGACCT|MAFF_NYGCTGAYRTCAGCR)N_FL|(?:CREB3L1_TGCCACGTGTACR|ATF4_GGATGAYGTCATCC|GATA3_NGATAACGATCW|SNAI2_NRCAGGTGCA)_FL|NR4A1_NAAAGGTCAN_eDBD_[12]|ARNT[2L]_RTCACGTGMN_eDBD|NRL_NWWWNTGCTGACN_FL|CDX2_NRTCGTAAAN_eDBD|KLF3_NRCCRCGCCCN_FL|BARHL2_NTAAACGN_FL)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:17.88 = 17.88 seconds
  * Elapsed CPU time:
     - User: 16.18
     - Sys: 1.69
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 3
     - Involuntarily (time slice expired): 22
  * Maximum resident set size (RSS: memory) (kiB): 8250552
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 72
  * Exit status: 0


taipale_tf_pairs
^taipale_tf_pairs__(?:(?:(?:P(?:OU2F1_FOXO6_RMATATKCNNNNNNNNNNNNN(?:NNN?RWMAA|RWMAA)C|OU2F1_EOMES_NNNTATGCAGYGTK|BX4_HOXA1(?:0_(?:YNNRTAAATC|NTCGTA)|_NYNATM)AATC)|(?:HOXD12_EOMES_(?:AGGYGYGANNNNNNNNNNNNNNN|TMRCACC)TCRTW|(?:TFAP2C_HOXB13_SCCNNNNGGCATNG|HOXC10_TBX21_TMRCACYTMA)TW|GCM2_TEF_RTRCGGGNNNNTTACGT|FOXO1_HOXA10_RWMAACAYCRTW)A|(?:(?:(?:TEAD4_FOXI1_(?:RCATWCCNNNNNNNNNNN(?:N(?:NN?R|R)|R)|GGWATGYG)T|FOXJ2_HOXB13_(?:NTTTATNRNT|TTTWATNRN))M|ETV2_FOXI1_RNCGGAANNA)|FOXJ2_PITX1_NTAATCCNNWM)AAC|(?:TEAD4_HOXA13_RCATWCCNNNNNNNNYNN|HOX(?:D12_TBX21_AGGTGTKAAGTC|B2_HOXB13_NNATCATN)G|POU2F1_HOXB13_NRMATATACCAA|(?:HOXB13_TBX21_ARGTGNNNNNN|GCM1_HOXB13_NCCCGCANNM)A)TAA|(?:(?:HOXB2_ESRRB_TAATK(?:NN|R)NNNNNNAAG|TEAD4_ESRRB_RCATWCNNNNNNAG)|MEIS1_HOXB13_SYMRTAAANCT)GTC|(?:FOXO1_HOXB13_GWMAACANNSYM|GCM1_HOXB13_NCCCGCANNNM|TEAD4_HOX(?:A13_GGWATGNNN|B13_RRAATGCA))RTAA|FOX(?:O1_HOXB13_RWMAACASYMR|J2_HOXB13_RTAAACWNA)TWAA|ELK1_(?:EOMES_RSCGGAANNAGGYGYN|SREBF2_RSCGGAANTSRCGTG|FOXI1_RSCGGAANRTMAAY)|HOXA3_EOMES_TAATKAGGTGNK|TEAD4_EOMES_RGAATGYGTG)A|TFAP2C_DLX3_NSCCNNNRGGCANNNNNN?TAATKR|(?:TEAD4_(?:(?:(?:CEBPD_NTTRCGYAANNNNNNNNRGWAT|(?:CEBPD_NTTRCGYAANNNNNNNRGWAT|(?:(?:CEBPB_NTTRCGYAANNNNNNG|(?:SOX(?:15_NACAATR|6_NNACAATN)NNNNN|SOX15_NACAATRNNNN))GAAT|HES7_GGWATGYNNNNCRCGY)))|GATA3_NGATAASNNNRGWAT)G|TBX21_ANGTGTGAATWC)|ETV2_HES7_NNCACGTGNNNNNCGGAWR|GCM1_SOX2_RTRSGGGNNNATTGTK|FOXJ3_TBX21_WAACAACACM)Y|(?:T(?:FAP2C_HES7_NNCRCGYGNNNNNNN?SCCNNNGG|EAD4_GSC2_RGWATGTTAATCC)|ETV2_RFX5_NCCGGAAGYNNCNTAGCAAC)S|(?:RFX3_FIGLA_GTTGCYNNNNNNNNNNNNCASS|(?:HOXB2_PAX1_NNMATTAGTCACGCWTSR|ELK1_PAX5_RSCGGAACYACGCWYSA)N|PITX1_FIGLA_TAATCCNNNNCASS)TG|(?:M(?:YBL1_(?:(?:(?:FIGLA_NCASSTGNNNNNNN(?:NN?CS|CS)|TBX21_AGGTGTGNCS)|ELF1_NMCCGGAACC)|HOXA13_CTCRTAAAWNNNNRMC)GT|EIS1_ONECUT2_TGACAGNWAATCRA)T|(?:HOXA3_PAX5_YNATTAGTCACGCWTSRN|(?:GCM2_DLX2_RTRCGGGN|TEAD4_DLX2_RCATTCY)NNNNTAAT)T|(?:HOXB2_SOX15_NYMATTANNNNNN?ACA|GCM1_ONECUT2_RTGCGGGNNATCG)AT|TEAD4_EOMES_GGWATGNRAGGTGNN)R|(?:(?:(?:(?:(?:TFAP2C_DLX3_NSCCNNNRGGCANNNNY|HOXB2_SPDEF_ANCCGGATNNNNNN|HOXB2_SOX15_ACAAWRSNNNN?Y|HOXB2_TCF3_NCACCTGNNNNN)M|E(?:TV(?:5_HOXA2_RSCGGWAATKNNNNNNNN|2_HOXA2_NCCGGAAGT)M|RF_HOXA3_RSCGGAWNNNNNNNYM|LK1_EVX1_RSCGGWANNNNYM|TV2_DRGX_RSCGGAWRY)|TEAD4_ALX4_RCATWCYNNNNTAATYRN|HOXB2_SOX15_ACAAWRSNNNNNYM|(?:TFAP2C_DRGX_SCCNNNGGCNNY|E(?:TV2_DLX2_RCCGGAANN|RF_DLX3_RSCGGAA)NNNNY|HOXB2_HOXB13_NNCGTAA|MEIS1_DRGX_TGTC)A|TEAD4_ALX4_GGAATGNNNNNYTA|MEIS1_EVX1_TGACANNNNNTC)|(?:TEAD4_PITX1_RCATWCNNNNG|ETV2_GSC2_RSCGGAANNNNG|GCM2_PITX1_RTRCGGGNN|HOXB2_PITX1_TAATKRNG)G)|(?:(?:TEAD4_PITX1_RCATWC|ETV2_GSC2_RSCGGAA)NNNNN|HOXB2_PITX1_TAATK(?:RNN|A)NN|HOXB2_PITX1_TAATKRNRN|FOXJ2_PITX1_TAAACA)GG)AT|P(?:ITX1_(?:(?:EOMES_RGGTGTKANN|(?:HES7_NNCRCGTGNN|HES7_NC(?:RCGTGN|ACGTG)))NN|TBX21_AGGTGNGAAR)GGAT|OU2F1_DLX2_WTWTGCATANNTAAT))TA|GCM(?:(?:(?:1_(?:(?:FIGLA_CASSTGNNNNNNNNNNNT|FIGLA_CASSTGNNNNNNN(?:N(?:NN)?T|T))G|PITX1_GGATTANNNNNN(?:N(?:NN)?TG|TG))|1_NHLH1_NCAGCTGNNNNNNNTR)|1_NHLH1_NCAGCTGNNNNNNNNTR)|2_FIGLA_NCASSTGNNNNNNNNRTR)CGGG|POU2F1_DLX2_TGMATATKCANNNNN?TAATKR|(?:E2F1_EOMES_NGGTGTGNNNGGCGCSNNNCR|T(?:EAD4_(?:(?:E(?:RG_RSCGGAANNNNNNNNC|LK3_NCCGGAANNNNNNNM)ATW|PITX1_RCATWCYNNNNN?TAAT)|CLOCK_NCACGTGNNNNNNCATW)C|FAP2C_E2F8_NNTCCCGCNNNCCNNNGG))C|(?:MYBL1_MAX_YAACGGNNNN|TEAD4_MAX_RCATTCC)NNNNNNNCACGTG|(?:TFAP4_DLX3_NCAGSTGNNNNNNNG|T(?:FAP4_DLX3_NCAGSTGNNNNNNG|EAD4_DLX2_RGWATGY)|E(?:TV2_DLX3_RSCGGAANNNNNNN|LK1_HOXA3_RSCGG)|GCM2_DLX3_RTRCGGGNNNNNN|GCM1_HOXA2_RTRSGGGNN|MEIS1_D(?:LX2_TGACANNN|RGX_TGACAS))TAATKR|(?:SOX6_TBX21_RGGTGTNNNNNNNNNYATTG|ETV2_SOX15_RSCGGAANNNNNNN?YWTTG|TEAD4_SPDEF_RGAATGCGGAWR)T|(?:MYBL1_MAX_YAACGGNNNNNNNNNNC|TEAD4_MAX_R(?:CATTCCNNNNNNC|GAATGYNN))ACGTG|E(?:LK1_(?:ONECUT2_RSCGGAASNGRTCGAT|FOXI1_RSCGGAANNRTMAAY)AN|TV2_BHLHA15_RSCGGANNCATATGK)|GCM1_FIGLA_CA(?:GCTGNNNN|SSTG)NNCCCGCAY|RFX3_SREBF2_NNRGYAACNTCACGTGAY|HOXB2_RFX5_TAATKRNNNNN?GCAAC|MYBL1_EOMES_RSGTGNNNAACGK|FOXO1_SPDEF_WMSCGGATGTKNW|GCM2_MAX_NTRNGGGNNNCACGTG)_CAP_repr|(?:(?:HOXD12_TBX21_NGGTGTNNNNNNNNNNNNNCACNTNNTW|(?:TEAD4_ESRRB_RCATTCYNNNNCAAGGT|ELK1_FOXI1_RSCGGAANRWMAA|MEIS1_EOMES_AGGTGTTGA)C|(?:GCM1_CEBPB_ATRSGGGNNNNTTR|ETV2_CEBPD_RSCGGANNTTG)CGYA|(?:(?:(?:HOXB13_(?:TBX21_ARGTGNNANNNMW|ETV1_RSCGGAARYNN)|HOXD12_ELK1_NRSCGGAAGNNG|(?:HOXB(?:13_EOMES_ANGTGTSNN|2_HOXB13_NNMATCAC)|GCM2_HOXA13_RTRCGGGTA)A)|HOXD12_HOXA3_NTAAT(?:NRSNY|KRSN)MR)T|E(?:(?:LK1_HOXB13_RSCGGAAGNNG|TV2_HOXB13_NCCGGAANYA)|RF_HOXB13_NNMGGAARNNR)T)AA|MGA_DLX3_YNATTANRGGTGTG|POU2F1_ETV1_NCCGGATATGC|FLI1_FOXI1_GAAAACCGAA)A|(?:POU2F1_EOMES_NNNTATGCNNNGYGANNNNNNNNNNNCR|TEAD4_EOMES_NGYGNNAMATWCYNNTMRCR|ETV2_GSC2_RCCGGANNNNNNNN(?:NN?TAATC|TAATC)|(?:TEAD4_E(?:TV7_RGAATGCGGAARYNNN|OMES_NNGYGYSACAT)T|(?:TEAD4_HOXA13_CYCRTAAATW|MGA_PITX1_RGGTGNTAAK))C)C|(?:TFAP2C_ONECUT2_NAT(?:YGATNNNNNNNNNG|(?:CGATNNNNNNNNG|CGATNNNNN(?:NN)?G))CCTNNGGS|E(?:TV2_EOMES_NGGTGTNNNNNNNNNNNNNNNCCGGAWN|LK1_TBX21_ANGTGNNANNNNNNNNNNNCNNMGGAW|RF_(?:CLOCK_CACGTGNNNNNSR|SREBF2_NNCACGTGACM)GGAAR|2F3_FOXO6_NMATGACACGCGCCM)|(?:(?:TFAP2C_ETV7_SCCNNNGGSNNNGGAAGNNN|HOXB2_ETV7_TAATKNNNNGNNNNNNC)TTC|FOX(?:J3_TBX21_NNGYGNNNNNNNNWAACAACA|O1_ETV7_RWMAACAGGNNNNNNTTC)|(?:ETV7_TBX21_NSCGGAARNNNNNN?TC|HOXB13_(?:EOMES_NNMRTAAANTM|TBX3_NNNRTAAATC))ACA|ETV2_RFX5_NNNTTCCGSNNNNGCAA)C|POU2F1_EOMES_(?:ARGTGTNNNAATATKYNNNCRC|RGTGTNNNAATATK)|MYBL1_EOMES_NNSYGNCNAACNNNNNNCACRC|(?:GCM(?:1_(?:SPDEF_RTRSKGGCGGANNNNNN?ATCC|ETV7_NT(?:NNN|RNG)GGCGGAAGNNNTTCC)|2_EOMES_RTGCGGGNAGGTG)|TEAD4_(?:SPDEF_RGWATSCGGATGNNNNTCCK|HOXA13_RCATWCCNNNNNNTTTAY)|HOXD12_EOMES_NNNACGANNNNNNTCGT)N|E2F3_EOMES_NNGYGNNNNGGCGCSNNNNCRC|GCM2_(?:SOX15_(?:RTRCGGGNN|ATRCGGGY)NNNNNYWT|TBX21_NNNCGGGNNNGG)TGT|E(?:(?:TV2_TEF_TTACGTNNNNNNNNNC|LK1_SREBF2_RWCACGTGNN)CG|RF_HES7_NNCACGTGNNNNN?CCG)GAA|HOXD12_ELK3_NTTTAYNNCCGGAAR|MYBL1_ONECUT2_NAACGGNNATYGA|FOXJ2_ELF1_RMAGAAAACCGAA)N|TEAD4_PAX5_RCATWCCNNNNNNNNNNNNRWGCGTGAC|(?:(?:(?:TEAD4_RFX5_RCATTCNNNNNNNNNNNNNNNNN|HOXB2_RFX5_SYMATTANNNNNNR)|TEAD4_RFX5_RCATTCNNNNNNNNNNNNNNNN)|ETV2_RFX5_RNCGGAANNNNNNNNN)GCAAC|(?:E(?:2F1_NHLH1_SGCGCCNNNNNNNNNNNNCAG|(?:TV2_NHLH1_NCCGGAANNNNNNCAG|RF_FIGLA_RSCGGAANCAS))C|(?:HOXB2_NHLH1_NYMATTANNNNNNNC|HOXB2_NHLH1_NYMATTANNNNNN?C)AGC|RFX3_FIGLA_TRGYAACNNNNCASS)TGN|(?:(?:E(?:LK1_HOXA3_NCCGGWNNNNNNNNNNNSC|TV5_EVX1_RSCGGWAATNNNNN)|HOXB2_ETV7_NSCGGAARNNNNNN?M|HOXB2_PAX5_NNGTCACGCNNC|GCM2_DRGX_RTRSGGGNN?A)|GCM2_PITX1_RTRCGGGSG)ATTA|RFX3_(?:ETV7_NNNMGGAANNNNNTCCNNNRCAAC|BHLHA15_NRGYAACNNNCATATGK)|(?:ETV2_EOMES_RCCGGANNNNNNNNNNNACACC|TEAD4_DLX2_NRCATTCNNNNYAAT|HOXB2_ELF1_TAATKRNNNNGGAAG|MGA_EVX1_AGGTGNTAATKWNNNN|(?:(?:GCM1_EL(?:K3_R|F1_G)TGCGG|TEAD4_ELF1_GGAAT)G|MEIS1_ELF1_NTGC)CGGAAG|FOXO1_ELF1_RWMAACAGGAAG)T|(?:HOXB2_TBX21_NGGTGTGNNNNNTMATTWGC|E(?:TV5_CLOCK_NCACGTGNNNNNS|RF_FOXI1_TGTTKM)CGGAW|GCM2_E2F8_NTRYGGGNNNTGGCGGGA|TEAD4_ELK1_RMATWCCGGAW)R|ARNTL_BHLHA15_RKCACGTGNNNMCATATGK|(?:ETV2_ONECUT2_RCCGGAANNNNNNR|GCM2_ONECUT2_RTRCGGGNNNNNN)ATCRAT|(?:(?:T(?:EAD4_(?:(?:EOMES_RGGTGTNNNNNNNNGA|HOXB13_C(?:TCG|YAA)TAAA)AT|HES7_RCATTCCNN(?:NNN)?CRCGY|TCF3_NCAGGTGNGWAT)|FAP2C_ELK1_NGCCTNNGGSNNCGGAA)|GCM1_MAX_NNCACGTGNNNGCGG)G|MYBL1_FIGLA_NCASSTGNNNNNN?YAACSG|E(?:(?:(?:TV2_(?:(?:FIGLA_NNCAGGTGNNNNNM|DLX3_TAATTRNNNN)CGGAA|ONECUT2_(?:RRTCRATNN|NRTCRATA)NCGGAA)|TV2_TCF3_CASSTGNNCCGGAW)|TV2_NHLH1_NGCAGCTGCCGGAW)|RF_NHLH1_NNCAGCTGCCGGAW)R|HOXB13_TBX3_NNNRTAAANNTNACAC)Y|ETV2_ONECUT2_RCCGGAANNNNNN?ATCGAT|(?:HOXB2_EL(?:F1_N(?:NYMATTA|YMATTAN)NNNNNNN|K1_TAATKRCC)GGAA|GCM1_EL(?:K1_RKRNRGGCGGAAR|F1_NRCCCRNN)CGGAA|(?:GCM2_HES7_RTRNKGGTNNNG|ERF_HES7_NCCGGAANNNNNN)CACGY|RFX3_HES7_NRGCAACNNNCRCGY|GCM1_(?:TBX21_AGGTGTNRTRC|FOXI1_RTAAATAN)GG|MYBL1_MAX_NCACGTGNNYAACS)GN|ETV2_SOX15_RSCGGAWNNNNNNNACAATR|SOX6_TBX21_RRGTGTNNNNNNNNACAATR|(?:E2F3_ONECUT2_NNSGCGCSNNNN?ATCG|TEAD4_ONECUT2_RCATTCCNNATCG)AY|ETV2_HES7_RSCGGAANNNNNNNCACGTGN|E(?:TV2_RFX5_NACTTCCGGYNNNNGCAACS|2F(?:1_HES7_(?:SRCRCGYGS|RRCRCGYG)YNNNNSGCGCS|3_(?:TBX21_NGGTGTGNNNGGCGCS|FOXI1_NNMCACCGCGCCCM))|(?:TV2_SREBF2_RTCACGYSNCCGGA|RF_FOXI1_RSCGGATGTTK)W|RF_ETV7_NSMGGACGGAYNTCCKS)|ETV2_SOX15_RSCGGAWNNNNNNACAATR|ARNTL_PITX1_(?:NNCACGTGNNNNRGM|CACGTGNNNRGA)TTA|ETV2_HES7_RSCGGAANNNNNNCACGTGN|GCM2_SOX15_RTRCGGGNNNRNACAAW|POU2F1_SOX(?:15_NNNGMATAACAAWR|2_NATTTRCNNNACAAT)R|(?:(?:(?:TEAD4_ELK1_RCCGGANRNNCGGW|HOXB2_EOMES_RGGTGTTA)A|E2F3_DRGX_SGCGCTAAT)|PITX1_EOMES_GGATTANNARGTG)TK|ERF_SREBF2_NSCGGAARNCACGTGN)N_CAP_repr|TFAP2C_MAX_TNSCCNNNGGSNNNNNNNNNNNNNN?CACGTGN_CAP_repr|(?:GCM(?:1_(?:TBX21_RGGTGWKNNNNNNNNNTNNCR|FOXI1_(?:NTGTTG|RTMAAC)A)TRNG|2_TBX21_AGGTGTNNNGSG|1_ELF1_NNMGGAARTGCK)G|(?:E2F1_ELK1_SGCGCNNNNNNNNNNN|GCM1_ELK3_ACCCGCANC)CGGAA|RFX3_SRF_NRGYAACNNNNNCCTWWWNNG|E2F1_ELK1_SGCGCNNNNN(?:NNNNN)?CGGAA|ETV(?:2_SREBF2_RTMRCGTGA|5_DRGX_TAATKRS)CGGAW)GN_CAP_repr|(?:(?:E(?:(?:LK1_TBX21_RAGGTSRNNNNNNNNNNNNNNNNCGGAAG|TV2_FOXI1_NRTMAACMGGAAR)|RF_FOXI1_RTAAACMGGAAR)|F(?:OXO1_ELK1_RWYAACAGGAAG|LI1_FOXI1_RTAAACMGGAAR))Y|ETV5_E(?:OMES_RNGTGNNNNNNNNNNNNNRCRCCGGAW|TV7_NNGGAMGGATKTCCG)S|(?:ETV(?:2_TBX21_(?:RGTGTKRNNNNNNNNNNNCN|TMACA)CMGGAA|5_FOX(?:I1_(?:TGTTGNC|GTMAACA)|O1_RTMAACA)GGAW)|GCM1_FOXO1_(?:GTMAATAA|RTMAATAM)GGGY)R|(?:E(?:(?:(?:RF_TBX21_NRGTGTNANNNNNNNNN|TV5_HES7_NNCACGTG)NNNNCCGGAA|2F(?:1_EOMES_RGGTGTNNNGGCGSNNTNNCRS|3_FOXO6_NMATGACACNGCGCCM)|LK1_ETV7_NNSMGGACGGAYNTCCKS)|RF_EOMES_RRGTGTKNNNNNNNNNNNNNNCMGGAN)|(?:GCM(?:1_SPDEF_RTGNKGGCGGAWGNNNNN?TCC|2_FOXI1_RTAAATANG)G|E(?:2F3_HES7_NNNNGCGCSNNNNNCAC|TV2_FIGLA_NNCGGAANCAG)GT|TFAP4_ETV(?:1_RSCGGAANCAG|4_RCCGGAARCAS)ST)G|HOXB13_TBX21_ARGTGTKANTTTAT|HOXB2_PAX(?:1_NNGTCACGN|9_SGTCACGC)NTCATT|ETV5_TCF3_CASSTGNRNNGGAAG|F(?:OXO1_E(?:LF1_NTGTTGNC|TV4_RWMAACA)GGAAR|OX(?:J2_ELF1_NWAAACAGGAAG|O1_ELK1_TGTTGCCGGAN)|LI1_FOXI1_TGTTKMCGGAWR)|ERF_FOXO1_RTMAACAGGAAR)N|A(?:LX4_(?:TBX21_RGGTGNTAATNNNNNNNNNCASY|EOMES_NGYGYTAAYNNNNNNTNACAC)N|TF4_CEBP(?:D_NGATGATGCAATN|B_NNATGAYGCAAY))|(?:ETV2_TBX21_RCCGGANNNNNNNNNNNACACC|(?:HOXB2_EL(?:F1_TAATKRNNNNN|K3_TAATGNNNNNC)|GCM1_ETV1_RTRNNGGC)GGAAG|(?:GCM2_ELK1_NNRNGGGCGGAA|E(?:TV2_FOXI1_T|LK1_FOXI1_W)GTTKMCGGAW)R|FOXO1_(?:ELK(?:3_RTMAACAGGAAG|1_RSCGGATGTTR)|FLI1_RTMAACAGGAAG))T|E2F3_TBX21_NGGTGTGNNGGCGCSNNNNCRM|(?:(?:GCM1_CEBPB_MTRSGGGNNNNNN?|TEAD4_CEBPD_RGWATGYNN)TTRCGY|E(?:LK1_(?:HOXB13_RNCGGAANYNRTW|TEF_NSCGGAWNTTACGT)|TV(?:5_CEBPD_NSCGGAN|2_TEF_RSCGGAW)NTTRCGY|RF_CEBPD_RSMGGAANTTGCGY)|(?:HOX(?:D12_E(?:LK(?:1_RSCGGAAGTAA|3_RSCGGAAGT(?:AA|CG))|TV(?:1_RSCGGAAGT(?:AA|NG)|4_RSCGGAAGT(?:AA|CG)))|B13_ELK1_RSMGGAARTNN)|GCM1_HOXB13_RT(?:GCGGGTAA|RNGGGTNN))TA|ETV2_HOXB13_NCCGGAAGTYRTA)AA|(?:ERF_ONECUT2_RSCGGAANNNNNNRTCG|ATF4_TEF_RNMTGATGCA)AT|GCM2_SOX15_RTRCGGGNNNNRNACAAW|(?:ETV(?:2_PITX1_RSCGGAANNNNNGGM|5_EVX1_RSCGGWAATNNNNA)TT|ETV2_FOXI1_RSCGGAANNRYMAAC|ETV2_EVX1_RSCGGWAATNNNYATT|HOXB2_ETV4_ACCGGAAATG)A|TEAD4_DLX2_NRCATTCNNNNNTAATTR|ELK1_SPDEF_NSMGGACGGAYNTCCKS|F(?:LI1_(?:D(?:LX2_RSCGGAANNNNNYA|RGX_NNCGGAWGYM)ATTA|CEBP[BD]_RNCGGANNTTGCGCAA|ETV7_NSMGGACGGAYNTCCKS)|OX(?:J2_HOXB13_RTAAACAYNRTAAA|(?:J3_ELF1_NNARAAAACCGAAWM|O1_ETV[14]_RCCGGAWGTKK)))|ETV2_ETV7_NSMGGACGGAYNTCCKS|POU2F1_SOX2_ATTTGCATNACAATR|TEAD4_SPDEF_RGAATGCGGAT|ETV(?:5_(?:FOXO1_RNCGGATGTTK|EOMES_TNRCACCGGA)|2_FOXO6_RCCGGATGTTK)W|(?:GCM1_ERG_RTRYGGGCGGAAR|TEAD4_DRGX_RGWATGYTAAT|HOXB2_TBX3_AGGTGTTAAT)K|ELK1_FOXI1_RSCGGATGTKK)N_CAP|(?:(?:(?:(?:GCM1_MAX_(?:NNCACGTGNNNNNNNNNNRTGCGGGYR|RTGCGGGNNNNNNNCACGTG)|TEAD4_ELK1_RGAATSCGGAAGY)N|TEAD4_(?:HOXA2_RCATTCNNNNNNCATTA|FIGLA_GGAATKNNCASSTG|ERG_RSCGGAAATRCC))|ELK1_TBX21_TNRCACCGGAAGNN)_CAP_|POU2F1_(?:GSC2_NNGATTANNNATGCAWNN|ELK1_NCCGGATATGCA)N_CAP_)repr|C(?:LOCK_(?:FIGLA_NCASSTGKNNNNNNNNN?CACGTGN_CAP_repr|NHLH1_N(?:NCAGCTGN|RCAGCTG)NNNNNCACGTGNN_CAP_repr|(?:EVX1_(?:YRATTAN|TAATTA)NNNNNNCACGTG|EVX1_(?:ATRATYANNNNCACGTG|CACGTGNNNTAATKAT)|TBX3_GGTGTGNNNNNCACGTG)_CAP_repr|BHLHA15_NCACGTGNNNNNCATATGN_CAP)|(?:UX1_(?:NHLH1_NNCAGCTGNNNNNNNN(?:NATY|ATC)GAT|(?:(?:SRF_NCCATAYWNGGWN|(?:(?:FOXO1_GTMAACAN|PITX1_GGATTA)N|TBX21_NTCACACM))NNNATCR|HOXA13_NYMRTAAANATYG)AT)|EBPG_CREB3L1_NGCCACGCAAY)N_CAP_repr|UX1_(?:(?:(?:SOX15_NATCRATNNNNNNNN?AACAATRS|RFX5_RATCRATNNNNNNNNNN?RGYAAC|(?:HOXA13_ATCRATNNNNYCRTAA|TBX21_TMACACCYAAT)A)|SOX15_ATCRATNNNNNNNNSYATTGTT)|TBX3_AGGTGTGNNNNATCRAT)_CAP_repr|EBPG_ELF1_TTGCGYAANNSCGGAAGN_CAP_repr|(?:UX1_(?:FOX(?:I1|O6)_RTAAACANNNNNATCRAT|HOXB13_SYMRTAAANATYGAT)N|EBPG_ATF4_NNATGAYGCAAT)_CAP)|(?:(?:ELK1_EOMES_RGGTGNGANNNNNNNNTNNCACCGGAA|TEAD4_HES7_GGWATGYNNNNNNCRCGY|GCM1_MAX_CACGTGNNNGCGG)GY|P(?:OU2F1_TBX21_NGTGNNNNMATATKNNNACACC|ITX1_HOXA3_TAATKRNNNNGGATTA|(?:OU2F1_(?:EOMES|TBX21)_NTATKCAGYGTN|BX4_HOXA10_CCATAAATC)A)|(?:GCM1_FIGLA_CAGCTGNNNNNNN(?:N(?:N(?:NN)?TGCGG|TGCGG)|TGCGG)|HOXB2_PAX[59]_NNMATTAGTCACGCWTSRNT|(?:GCM2_FIGLA_RTRCGGGNNCASS|MEIS1_DLX3_TGACANSNTAAT)T)G|TEAD4_(?:CEBPD_NTTRCGYAAN|TBX21_ARGTGTKR)NNNNNRGWATGY|(?:ETV2_(?:CLOCK_NNCACGTGNNNNN|EOMES_TCACA)CCGGAWR|TEAD4_(?:EOMES_WNGTGYKAMATWC|FLI1_RCCGGAAATRS))Y|TEAD4_(?:CLOCK_NCACGTGNNNNNNNCATW|PITX1_RCATTCNNNNNTAAT|ETV4_RCCGGAAATR)CC|FLI1_ONECUT2_RSCGGAANNNNNNRTCGAT|(?:ETV(?:2_HOXA2_NCCGGAAGNNNNNNY|5_HOXA2_RNCGGAWGT)M|TEAD4_(?:HOXA3_RCATTC[NY]NNNNNC|DLX3_RCATTCCNNNY[AM])|(?:ETV2_DLX(?:3_RSCGGAANNNNNN?Y|2_RCCGGAANNNNNY)|TEAD4_DLX2_RCATTCYNNNN?C)A|HOXB2_TCF3_NCAGGTGNNNNNM|E(?:TV(?:5_D(?:LX2_RSCGGAANNNNN|RGX_RSMGGAWG)|2_DRGX_RSCGGAAN)|RF_DLX3_RSCGGAANNNNN)YA|FLI1_DLX2_RSCGGAARYA)ATTA|E(?:(?:LK1_PAX[19]_RSCGGAACYACGCWYSANT|TV5_HES7_CCGGAANNNNNNCACGT)G|TV5_HOXA2_RSCGGWAATKR|RF_TBX21_TMACACCGGAAG)|(?:ETV(?:2_PAX5_ACCGGANNTACGCNNNNNY|5_EVX1_RSCGGWAATK)|(?:(?:GCM1_(?:ONECUT2_RTGCGGGNNNTCGA|ETV4_RTGCGGGCGGAAG)|TEAD4_ELF1_RGAATGCGGAAG)|TEAD4_DRGX_GGAATGTTAAT)T|GCM2_DLX3_RTRCGGGNNNNNTAATK|TEAD4_DLX3_RCATTCCNNNNTAATK|TEAD4_DLX3_RCATTCNNNNNTAATK|GCM1_FOXI1_NNGTMAATANGGGY|HOXB2_TBX21_NAGGTGNTAATK|MGA_DLX(?:2_AGGTGNTAATT|3_AGGTGNTAATK))R|ETV2_SPDEF_NSCGGACGGAWATCCGSNT|(?:MEIS1_HOXA13_SYNRTAAANNTGTC|(?:HOX(?:D12_TBX21_YNRCACSTCG|C10_EOMES_TMACACYYMR)TW|ETV5_HOX(?:A13_NNCGGAWGTNR|B13_NNCGGANGNNN)TW)A|TEAD4_HOXB13_(?:GGWATGN|RGAATGC)NNRTAA|F(?:OXO1_HOXB13_GWMAACAYM|LI1_HOXB13_RSCGGAANYN)RTAA|GCM1_HOXA13_RKRNGGGNNATAA|HOXB2_(?:(?:EOMES|TBX21)_TAATKRGGTGYK|ETV1_ACCGGAAATG)|MGA_DLX2_SYAATTANWGGTGYG)A|(?:ERF_PITX1_NSCGGANNNNNN?GGM|HOXB2_EL(?:K[13]_RSCGGAAGTMR|F1_SMGGAAGTMR))TTA|F(?:OXO1_EL(?:F1_NNGAAAACCGAANM|K3_RCCGGAWGTKKW)|LI1_(?:TCF3_NCCGGANNCASSTG|FOXI1_RCCGGATGTTKW)Y)|TEAD4_HOXB13_NTCGTAAAATGC|ERF_EOMES_TNTCACACCGGAAAT|ETV2_FOXI1_RSCGGATGTTKW|TEAD4_ETV1_RSCGGAAATRCM|ALX4_TBX21_RGGTGYTAATWR)_CAP|(?:TEAD4_FIGLA_RATTCCNNNNNNNNNNCASS|HOXD12_FIGLA_SYMRTAAANNNNCASS|ETV5_TCF3_RNCGGAAGNNNNNCASS|MEIS1_SOX2_TGACAKNNNAACAA)TGN_CAP_repr|TFAP2C_MAX_TNSCCNNNGGSNNNN?CACGTGN_CAP_repr|(?:(?:(?:GCM1_MAX_(?:NNCACGTGNNNNNNNNNNRTGCGGGYR|RTGCGGGNNNNNNNCACGTG)|TEAD4_ELK1_RGAATSCGGAAGY)N|TEAD4_(?:HOXA2_RCATTCNNNNNNCATTA|FIGLA_GGAATKNNCASSTG|ERG_RSCGGAAATRCC))|ELK1_TBX21_TNRCACCGGAAGNN)_CAP|TEAD4_CLOCK_GGWATGNNNNNNN?CACGTGN_CAP_repr|(?:(?:TFAP4_MAX_NCAGCTGN|MEIS1_MAX_NTGACR)NNNNN|ERF_MAX_RSCGGAA)NCACGTGN_CAP_repr|ERF_DLX2_RSCGGAANNNNNYMATTA_CAP_repr_[12]|(?:(?:MEIS2_ONECUT2_NTGACAGNTAATCRATAN|HOXB13_ONECUT2_NNNRTAAAWATYGAYY|TFAP4_MAX_NCAGCTGNNNNNCACGTGN)|ELK1_HOXA1_RCCGGAAGTAATTA)_CAP|(?:E(?:LK1_FOXI1_RSCGGAANNRTMAAYA|2F3_TBX21_NGGTGTGNNGGCGCSN)_|GCM1_SPDEF_RTGNKGGCGGAWG_)CAP_repr|POU2F1_(?:GSC2_NNGATTANNNATGCAWNN|ELK1_NCCGGATATGCA)N_CAP|HOX(?:13_MEIS1_NNNRTAAANCTGTN|B13_Fox_NNMAACAYNRTAAA)_ChIP_Exo|(?:(?:MEIS2_ONECUT2_NTGACAGNTAATCRATAN|HOXB13_ONECUT2_NNNRTAAAWATYGAYY|TFAP4_MAX_NCAGCTGNNNNNCACGTGN)|ELK1_HOXA1_RCCGGAAGTAATTA)_HT|(?:(?:TFAP4_DLX3_NNCAGCTGNNNNNNNTAATT|(?:T(?:FAP4_FLI1_ACCGGAAACAGC|CF15_NACAYA)TG|HOX(?:A3_NSTA|D4_NNYM)ATTA)N|ETV7_NNGGAAGTGCTTCCN)N|(?:T(?:FAP4_DLX3_NNCAGCTGNNNNTAATK|BX3_AGGTGTN)|E(?:TV7_NNYTTCCGGGAARN|LF2_NA(?:MC|TG)CGGAAGT)|FOS_NGATGACGTCATC)R|(?:FLI1_HOXB13_NCCGGAANTNRTA|GATA1_AGAT)AAN|FLI1_DLX2_ACCGGAARTNNNYAATTA|MEIS2_HOXA13_CYCATAAANNTGTCA|NR1D2_TRGGTYASTAGGTCA|GLI3_NGACCACMCACGWNG|P(?:OU5F1_(?:NATATGCTAATKN|WATGCGCATW)|AX3_GTCACGCNNMATTAN)|NR1I2_RGTTCRNNNRGTTC|IRF2_NAANCGAAASYR|ET(?:V7_NNG|S2_RC)CGGAAGTG|FOXA1_TRNGTAAACA|HES1_GNCACGTGNC|MYCL2_SCACGTGS|HOXA(?:4_RT|6_SY|7_NY)MATTAN)_HT|ELK1_ONECUT2_RSCGGAASNGRTCGATA_HT|POU2F1_(?:SOX15_WTGMATAACAATR_CAP_[12]|ETV4_NCCGGATATGCAN_CAP_[12])|FLI1_BHLHA15_NCCGGAANCATATGN_CAP|(?:GCM1_ELK1_RTGCGG|TEAD4_SPIB_RGAAT)GCGGAAGTN_CAP_[12]|(?:TFAP4_FLI1_RSCGGAWRCASS|ETV5_FIGLA_RSCGGAARCAGG|FLI1_(?:FIGLA_RSCGGAANCASS|MAX_RSCGGAANCACG)|ETV5_FOXI1_RSCGGATGT)TGN_CAP|RORB_A(?:WNTAGGTCATGACCTANWT|ANTAGGTCAGTAGGTCA)_HT|(?:GCM(?:1_FOXI1_TGTTGANG|2_FOXI1_TGTTKATR)CGG|ELK1_EOMES_TNRCACCGGAA)GN_CAP|MGA_EVX1_AGGTGNTAATKW_CAP|(?:SOX(?:17_|6_C)ACCGAACAA|(?:BACH1_ATGAC|JUN_ATGACG)TCA)T_HT)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:13.25 = 13.25 seconds
  * Elapsed CPU time:
     - User: 11.69
     - Sys: 1.55
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 106
  * Maximum resident set size (RSS: memory) (kiB): 6866384
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 40
  * Exit status: 0


tfdimers
^tfdimers__MD00(?:0(?:0[1-9]|2[013-9])|39[0-689]|46[0-79]|(?:0[13-9]|3[0-8]|4[0-57-9])[0-9]|[125][0-9][0-9]|60[0-3])$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 5524
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


tiffin
^tiffin__TIFDMEM0000(?:0(?:(?:0[39]|34|40|79)|17)|107)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.00 = 0.00 seconds
  * Elapsed CPU time:
     - User: 0.00
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 3216
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0


transfac_pro
^transfac_pro__M0(?:0(?:(?:3(?:0[38]|2[125-9]|3[2389]|6[6-9]|7[015])|4(?:0[0135-7]|4[0-247]|8[129])|51[1348]|6(?:1[69]|2[1-469]|3[0-2489]|4[016-9]|5[0258]|7[1289]|87)|7(?:1[2367]|2[1246-9]|4[02-4679])|9(?:1[235-9]|3[0-35689]|4[0-35-79]))|99[1-37-9])|1(?:0(?:0[0-479]|2[02389]|5[147-9]|7[02358])|1(?:2[2-57]|3[1-37-9]|4[25-9]|5[0-4]|7[1-357]|8[1-35-7])|2(?:1[124679]|2[0347-9]|8[12478])|5(?:0[467]|2[46-8]|4[389]|5[3-58]|7[02457]|8[06-9])|6(?:2[4-6]|3[01]|4[0156]|6[0-256]|7[35]|9[24-69])|31[2-9]|08[1-4689]|04[2-579]|7(?:0[2-9]|1[1-4689]|2[1-58]|3[2-579]|4[2-479]|5[29]|8[238]|9[346-8])|8(?:0[1689]|1[0467]|3[014-8]|4[134]|8[2-689]|9[04-6])|82[0-36]|9(?:0[246]|1[0159]|3[079]|5[2-6]|6[16-9]|9[0-36]))|073[1346-9]|0(?:53|82)1|116[02-57-9]|129[2457-9]|075[0-24]|2(?:0(?:0[02469]|3[1346-9]|4[0-58])|191|2(?:2[04]|4[126]|5[029]|6[1-35-9]|7[0-389])|7(?:4[02-57-9]|5[0236-9])|80[1-47-9]|9(?:1[02-579]|2[2457-9]|4[0-24]))|(?:076|197)[1-79]|295[89]|(?:095|281)[013-79]|237[0-24-8]|3(?:1(?:2[13-57-9]|3[03-57-9])|57[1-79]|53[89]|7(?:8[89]|9[013-79])|8(?:0[2-79]|5[0-24-8]|6[025-9]))|101[0-4679]|177[024689]|388[0-4689]|069[13-689]|156[489]|4(?:59[45]|6(?:1[0134679]|2[2-7]|3[1-35689]|7[0-289]|8[0-579])|7(?:2[0-4679]|3[12457-9]|5[024689]|6[013-5]|7[014-6]|9[04579])|70[2-46-8]|71[013-689]|8(?:0[2-46-8]|2[2-469]|3[1-379]|4[013-689]|5[03-689]|6[0-4689]|7[03579]|8[0136-9]|9[0-35-8])|9(?:0[13-689]|1[023568]|3[0-57]|4[489]|5[0359]|6[067]))|5(?:19[5-7]|2(?:0[0-359]|1[23679]|2[0-249]|3[34689]|4[146-9]|5[07]|6[0158]|9[57-9])|3(?:0[01346-9]|6[0-68]|7[0-469])|62[024-9])|315[0-5]|69(?:6[2-46-9]|9[0-5])|09[68][0-7]|(?:202|314)[1-8]|(?:111|287|466)[1-46-9]|(?:1(?:10|24)|561|683)[0-57-9]|2(?:88|93)[013-57-9]|(?:109|478)[0-2457-9]|(?:079|147|2(?:[13]1|85)|443|54[46]|6(?:78|84))[0-79]|120[0-478]|(?:1(?:76|94)|2(?:[14]8|96))8|049[2-4]|279[014-9]|276[0-47-9]|(?:2(?:08|10|32|86)|541|629)[0-24-9]|(?:097|3(?:55|84)|464|657)[1-9]|(?:2(?:33|90)|626)[02-9]|(?:1(?:[02]6|44)|5(?:42|69)|6(?:16|22))[0-46-9]|7(?:06[0-7]|1(?:1[1-8]|3[1-46-9]|4[0-57-9]|5[378]|6[02378]|7[0348])|2(?:7[05-8]|9[0-246-9])|3(?:3[1257-9]|4[013-57-9]|6[0-578]|9[0-2457-9])|(?:28|31)[0-79]|4(?:[13][0-79]|6[014-79]|7[4-79]|8[0-478])|5(?:68|7[2-4]|9[0379])|26[014-9]|6(?:1[0-24578]|2[7-9]|7[014-9])|7(?:1[0-47-9]|4[0-69]|5[013-589])|(?:3[07]|42)[0-24-9]|20[04-9]|8(?:4[0-24-9]|5[0-59]|6[1-9]|7[04-9])|9(?:1[0-379]|2[013479]|3[02-9]|4[02-47-9]|7[0-25-9]|[69][0-46-9]))|457[0-3]|(?:031|2(?:16|47)|511|719)2|161[0569]|(?:1(?:25|38)|543|6(?:13|95)|732)[0-35-9]|740[02-79]|(?:103|492)[1-7]|070[1467]|(?:185|703)[4-9]|766[0-36-9]|724[26-9]|042[5-8]|738[024-8]|153[2-46]|(?:119|273|707)[5-9]|8(?:0(?:2[0478]|3[259]|5[0-589]|6[13]|7[569]|8[0-3]|9[069])|1(?:0[4589]|1[16]|42|5[0569]|8[03-79]|9[0-24589])|2(?:0[0-35-9]|1[3-6]|2[02-79]|3[1-35-79]|4[1-7]|5[1-369]|6[1467]|7[013-58]|8[1-59])|3(?:0[2-468]|1[02-689]|2[023689]|3[01347-9]|4[124-6]|5[023589]|6[1479]|7[1457-9]|8[0-3579]|9[02-589])|4(?:0[124-689]|1[1-589]|2[3-79]|3[4-9]|4[0-6]|5[1357-9]|6[15-9]|7[0-37]|8[0-36-9]|9[13-58])|5(?:0[015-9]|1[0-24-689]|2[0135-79]|3[2479]|4[01579]|5[6-8]|6[26-9]|7[0145]|8[3-7])|6(?:0[025689]|1[0689]|2[346]|3[02578]|4[15-79]|5[046]|6[0247]|7[14-8]|8[0235]|9[0-246])|7(?:0[02458]|1[01389]|2[5-8]|3[03-59]|4[01346]|5[125-79]|6[03-8]|8[024-8]|9[2-46])|01[5-9]|8(?:0[0-3569]|1[136-9]|2[024-689]|3[1568]|6[5-9]))|(?:034|358|718|859)[0-2]|465[39]|(?:046|321)6|192[34]|043[0-26]|(?:092|889)[0-24-79]|528[03]|(?:238|5(?:08|27))3|(?:0(?:39|47|78)|221|311)9|(?:080|1(?:3[23679]|4[0-3568]|59|65|87|98)|2(?:0[15-79]|29|3[045]|78|8[349])|3(?:5[46]|8[239])|4(?:1[0-24-9]|4[0-246-9]|5[0-6]|69)|5(?:3[1-489]|4[057-9]|5[0-46-9]|6[03-8])|6(?:1[0-24579]|2[13-578]|5[0-689]|7[0-79]|8[25-9]|9[0-2])|7(?:0[4589]|1[02]|2[1-35]|45|6[03-589]|7[023689]|8[0-389]|9[05])|(?:39|4[023]|5[7-9]|6[0346])[0-9]|8(?:87|9[0-9]))[0-9]|(?:066|515)5|(?:081|1(?:51|60)|309|752|884)0|(?:751|812)4|306[47]|149[48]|(?:127|829)[02359]|804[1-36-9]|474[13-9]|(?:123|2(?:28|36)|4(?:45|81)|694)[013-9]|(?:077|13[05]|282|387|413|5[35]5|680|735|888)[0-8]|(?:1(?:34|86)|277|381|6(?:18|20|81|9[378])|7(?:77|98)|8(?:00|77))[0-689]|744[78]|9(?:0(?:1[0-2]|3[39]|46|5[34]|6[35689]|7[0-24679]|8[1-47]|[29][0-26])|1(?:0[3-57]|1[679]|2[0-24-79]|3[03]|6[17-9]|73|8[79]|9[1-4])|00[0-9]|2(?:29|3[0-9]|55|6[2-69]|[47]0|84|9[3-5])|3(?:0[05]|1[47])|4(?:0[48]|1[02359]|5[35-8]|6[1-36-9]|7[2569]|8[13-9]|9[0-35-7])|5(?:0[0679]|1[013-9]|2[0-8]|3[0-689]|4[0146]|6[0-28]|7[78]|8[056])))$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.15 = 0.15 seconds
  * Elapsed CPU time:
     - User: 0.14
     - Sys: 0.01
  * CPU usage: 99%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 7
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 43884
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


transfac_public
^transfac_public__M00(?:0(?:(?:(?:0[124-8]|1[1-46-9]|2[1-68]|4[0-5]|6[0-35689]|9[04-9])|7[0-9])|3[2-9])|1(?:0[2-689]|4[013-8]|5[0-25-9]|[1-36][0-9]|7[02-9]|8[2-9]|9[0-69])|2(?:0[13-689]|1[05-7]|2[0-58]|3[1-79]|5[0-24-9]|6[0-246-9]|7[0-26-9]|8[01457-9])|3(?:02|4[6-9]|5[01689]|6[02]|7[378]|9[2-68])|(?:05|24)[0-689]|29[0-4]|08[0-8]|4(?:1[0-689]|2[0-4]|3[357]|4[689]|5[013-79]|6[0-57-9]|7[0-8]|8[03-7]|9[015-9])|380|5(?:00|1[025-7]|2[68]|3[289])|615)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.01 = 0.01 seconds
  * Elapsed CPU time:
     - User: 0.01
     - Sys: 0.00
  * CPU usage: 100%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 0
  * Maximum resident set size (RSS: memory) (kiB): 5076
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 8
  * Exit status: 0


yetfasco
^yetfasco__(?:MATALPHA1\-MCM1\-dimer_1442|TBP\-TFII(?:A(?:\-TFIIB_1330|_1328)|B_1329)|Y(?:BR089C\-A_79|F(?:R034C_222|L021W_96)|IL131C_200|LR131C_133|(?:ER051W_6|DR096W_5)6|KR099W_40)2|Y(?:(?:(?:B(?:L103C_144|R083W_81)|GL073W_61|IL036W_58)|KR034W_135)5|(?:ER(?:028C_214|130C_53)|BR182C_86)4|(?:ER064C_20|GL096W_4)94|ML081W_2194|(?:ER069W_142|FL044C_116|MR075W_106|ML113W_141|GL073W_47|LR176C_49|NL(?:027W_51|139C_78))6|(?:GL073W_(?:146|41)|DR266C_116|IL056W_209|NL167C_140|MR043W_83)1|P(?:L177C_21|R186C_13)21|(?:PR086W_132|ER169W_54|CL055W_12)7|(?:EL009C_136|GL209W_214|MR042W_148|PR104C_220)3|JL(?:056C_2097|110C_2133)|ER068W_556|OR380W_756|(?:LR403W_7|OR344C_3)97)|Y(?:CR040W_141|LR176C_147|(?:DR423C_20|ER148W_7)9|KL062W_51|ML027W_49|ER045C_)8|Y(?:GL192W_100|DR477W_111|MR037C_138|BL103C_87|CR065W_57)0|Y(?:ML065W_154|ER040W_53|BR267W_48|DR(?:146C_56|259C_59)|OR028C_40|P(?:L089C_41|R052C_87)|GL254W_6)9|YGL035C_2142|YNL068C_830)$

Time output:
------------

  * Command: grex -c --file /dev/fd/63
  * Elapsed wall time: 0:00.06 = 0.06 seconds
  * Elapsed CPU time:
     - User: 0.06
     - Sys: 0.00
  * CPU usage: 98%
  * Context switching:
     - Voluntarily (e.g.: waiting for I/O operation): 1
     - Involuntarily (time slice expired): 1
  * Maximum resident set size (RSS: memory) (kiB): 31096
  * Number of times the process was swapped out of main memory: 0
  * Filesystem:
     - # of inputs: 0
     - # of outputs: 0
  * Exit status: 0