container-batch_correction's People
container-batch_correction's Issues
Failure when using the container, missing `ade4` library
2018-03-06T15:00:19.69073679Z 113 ions 2 batch(es)
2018-03-06T15:00:20.315076043Z Error in library(ade4) : there is no package called 'ade4'
2018-03-06T15:00:20.315111398Z Calls: norm_QCpool ... suppressPackageStartupMessages -> withCallingHandlers -> library
2018-03-06T15:00:20.31511858Z Execution halted
Reproducible by calling:
docker run --entrypoint=R batch -e 'library(ade4)'
During the building of the container, several R packages fail to install. But R does not return a status error. A script in Jenkins would help to detect such issue. See phnmnl/jenkins-scripts#8 .
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