phovea / phovea_clue Goto Github PK

including annotations

show e.g. the slide note as "subtitle".

Alternative use magic words in text annotations, e.g. ${title} ${stateId}, ...

according to the console, there was an internal error during deleting of a story node

there is some dragging bug using the d3 drag behavior on div elements

StratomeX should be empty after clicking the start node in the provenance graph.
This is what I get after clicking the start node:

currently just a specific state can be restored but not one story element

e.g. clue_story=...&clue_autoplay=True

• attributes: x,y,size
• color ... continent
• scaling: log/linear
• timeline with steps
• lasso selection
• overview map
• background: year

• no default story but show always the drop marker
• convert the dropdown to expandable menu like in the provenance one showing a select and the buttons
• show the toolbar by default when so story is selected

make the tags more salient, e.g. in the placeholder add a hint + at the bottom show the automatically extracted tags

currently all the remotely stored provenance graphs (maybe use as decision criterion whether the user is logged in?) are available to all other.

even with concurrent modifications.

possible way:

lock feature ... a user locks provenance graph, i.e. others can't open them or just create a copy and work with that

problem: how and when to unlock?

currently if they are used it will be the default one.

includes way that the e.g. addColumn really ends when it is fully done (including animations)

modes:

• exploration: add note to state = attribute of state node
• authoring: add annotation (arrow, text, frame) to story = attribute of story node
• presentation: add comment to story = attribute of story node

exploration: maybe just the currently selected line (thumbnails?, labels?, just icons?)
authoring: full
presentation: none

in the current version the provenance graph is stored locally. Server side store is prepared but not yet tested + how to handle clearing/updates?

exploring: none
authoring: full
presentation: just maybe a timeline with marks + popover tooltip

including:

• thumbnail
• bookmark feature
• icon, title = name
• textarea for notes with #<tagname extraction

I'm ok with hiding the toolbar and logo. But I do think that we should keep the authoring/exploration/presentation switcher visible at any time.

e.g.

• color
• font size
• font

1. Change Data-Viz from A to B and back to A.
2. Switch in another branch of the graph
3. Graph gets extended.

some columns aren't removed or appear twice

no duration,

stepper interface vertically, similar to Tableau Storytelling.

add a time marker what follows the time when using the player

see also #16

applications should provide to simple reset their state and the provenance graph.

this would allow to either invert actions for reset and start again

modes:

• exploration: undo button
• exploration/authoring: back/forth
• authoring, authoring/presentation: play/pause, back, stop, forth
• presentation: play/pause

two options:

• define via text
• map story element height to the duration

modes:

• exploration: all operations (add, remove, update, select, ...)
• exploration/authoring: story manipulation operations (remove, select) --> what else? + show and manipulate annotations
• authoring: show and manipulate annotations
• presentation: readonly no interaction?

If we end up showing the stratification tab only, we can also remove the horizontal space for the tab selector altogether.

containing the different action category icons + name + filterable

what about: operations? bookmark / tags?

using PhantomJS one can render a website on the server side and e.g. take a screenshot.

This could be useful for creating real thumbnails instead of using client side html2canvas

sometimes elements get lost when reordering them using dnd

i.e. similar to video player. On mouse over/move show the ui elements.

ui elements:

• play / pause, next/previous
• toolbar for switching to different modi
• simplified story (e.g. just a line representing the length + popover with thumbnail and description)

currently appended

modes:

• exploration: none
• authoring/presentation: small glyphs per step, no details
• authoring3/presentation1: glyphs with timing, annotations available, ...
• authoring: timing, annotations, preview, story manipulation (add, remove story node)

KIRC dataset + TCGA grouping

implement a mechanism to shorten the link. currently there are a bunch of parameters given for defining the actual state -> shorter version with server side split and lookup what it means

When I click a particular state, I would expect that the visualization shows this state.

e.g. red for the circles fill color

Clean and short dataset names are also important for the annotations of states.
I suggest to:

• add additional column showing data package (GMB, demo, etc.)
• dataset column should only show dataset name (Methylation, microRNA, etc.)

• way to clear/delete a provenance graph

at the top below the title?

conflicts with #45