piroonj Goto Github PK
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piroonj's Projects
bacass
Simple bacterial assembly and annotation pipeline
cresil_nanocircle
genotyphi
Assign genotypes to Salmonella Typhi genomes based on VCF files (mapped to Typhi CT18 reference genome)
homopolish
High-quality Nanopore-only genome polisher
nanoclust
NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads
nanocompore
RNA modifications detection from Nanopore dRNA-Seq data
nanocompore_pipeline
Nextflow pipeline for nanocompore analysis
nanofilter
nanosummy
summary bam/sam and filtering
nanotools
ncatras_pipeline
programmingassignment2
Repository for Programming Assignment 2 for R Programming on Coursera
pycircos
python Circos wrap scripts
qmrlfs-finder
QmRLFS (Quantitative Models of RLFS) models to predict RLFSs
seqstats
Quick summary statistics on fasta/fastq(.gz) files
thailand.json
Thailand GeoJson file.
training
Nextflow training material
unicycler
hybrid assembly pipeline for bacterial genomes
wf-human-variation
ws_ont_assembly
Oxford Nanopore data analysis and microbial genome assembly
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