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Snakemake pipeline to reproduce the results in the forthcoming paper "One week ahead prediction of harmful algal blooms in Iowa lakes"

License: MIT License

Shell 0.53% R 83.01% Python 16.46%
data-science harmful-algal-blooms iowa iowastateuniversity snakemake machine-learning python r tidymodels classimbalance

one_week_ahead's Introduction

Hi!

I'm a bioinformatics PhD candidate at Iowa State University. Check out my website!

๐Ÿต Bio

  • ๐Ÿงฌ Bioinformatics PhD candidate in the GERMS lab at Iowa State University studying the impact of agriculture on soil systems and microbial communities
  • ๐ŸŽ“ Education:
    • ๐Ÿงฌ MS in bioinformatics from Iowa State University (focusing on biodiversity)
    • ๐Ÿ“ BS in mathematics and computer science from California State University, Long Beach
  • โŒจ๏ธ Previously: intern at RStudio on the R Markdown team
  • ๐Ÿ“‹ Check out my CV

๐Ÿ› ๏ธ What I'm up to

๐Ÿง™โ€โ™‚๏ธ Interests

  • ๐Ÿ’ป Full-stack data science, CI/CD, testing, literate programming, reproducibility
  • ๐ŸŽฎ Magic: the Gathering, Teamfight Tactics, fighting games, roguelikes, chess
  • ๐Ÿƒ Table tennis, Olympic weightlifting

๐Ÿ“ซ Contact Me

ย 

Email: pvillanueva13 at gmail dot com

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