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obelisc's Issues

Issues in running obelisc

Dear @qsonehara,

I receive errors while running obelisc command with both the example sets and a personal sets, made by Plink 1.9
I report below the errors:

 obelisc hapmap3_r2_b37_fwd.consensus.qc.poly.JPT.example -c hapmap3_r2_b37_fwd.consensus.qc.poly.JPT.example.case -w 1500 -s 1500 -o example_ibdmapping -f example_out.pdf
/home/path/example
SNP data loaded.
Traceback (most recent call last):
  File "/home/.local/bin/obelisc", line 8, in <module>
    sys.exit(main())
  File "/home/.local/lib/python3.8/site-packages/obelisc/main.py", line 375, in main
    mapping = Mapping(args.prefix, args.case_file)
  File "/home/.local/lib/python3.8/site-packages/obelisc/main.py", line 59, in __init__
    L.append(i[1].decode('utf-8'))
AttributeError: 'numpy.str_' object has no attribute 'decode'

Is there any known solution?

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