The anuran from ramellose

input txt file

Hello,

thank you for developing and providing this interesting tool.

in the description you mention:

"The script recognizes gml, graphml and txt files (without headers) by their extension. The text files should be edge lists, with the third column containing edge weight."

should the txt file be comma-separated?

Thanks,
Marie

IndexError: list index out of range

I have three groups and each group has 30 networks, which are labelled with "1_XXX", "2_XXX" as stated in your description. However, when I run anuran with the following commands

anuran -i network_plots_a network_plots_b network_plots_c -c -net -stats bonferroni -o R\

I get the following error message:

2021-11-06 10:14:56,479 - anuran.main - INFO - Imported 3 group(s) of networks.
2021-11-06 10:14:56,480 - anuran.main - WARNING - One of the groups (network_plots_a) does not contain enough networks to generate robust tests for centralities or set sizes.
Suppressing warnings, but please be careful with the statistics!
Preferably use groups with at least 20 networks.
2021-11-06 10:14:56,482 - anuran.main - WARNING - One of the groups (network_plots_b) does not contain enough networks to generate robust tests for centralities or set sizes.
Suppressing warnings, but please be careful with the statistics!
Preferably use groups with at least 20 networks.
2021-11-06 10:14:56,482 - anuran.main - WARNING - One of the groups (network_plots_c) does not contain enough networks to generate robust tests for centralities or set sizes.
Suppressing warnings, but please be careful with the statistics!
Preferably use groups with at least 20 networks.
2021-11-06 10:15:09,044 - anuran.main - INFO - Set sizes exported to:  R\_sets.csv
2021-11-06 10:15:09,047 - anuran.main - ERROR - Could not rank centralities!
Traceback (most recent call last):
  File "C:\Anaconda3\envs\anuran\lib\site-packages\anuran\main.py", line 328, in model_calcs
    centralities = generate_ci_frame(networks, random, degree,
  File "C:\Anaconda3\envs\anuran\lib\site-packages\anuran\centrality.py", line 56, in generate_ci_frame
    results = _generate_ci_rows(name='Input', data=results, group=group,
  File "C:\Anaconda3\envs\anuran\lib\site-packages\anuran\centrality.py", line 106, in _generate_ci_rows
    properties = networks[0][2].keys() # gets all centrality names
IndexError: list index out of range

I have 30 networks, why do I get the warning "not enough networks" and what can I do about the IndexError?
I tried to run anuran without time-dependent networks and had about 40 networks per group, but still the same warnings and errors.

Thank you very much,
Marie

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