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Hi, I’m Robrecht 👋

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Robrecht Cannoodt's Projects

ggrepel icon ggrepel

:round_pushpin: Repel overlapping text labels away from each other.

gillespiessa2 icon gillespiessa2

Gillespie’s Stochastic Simulation Algorithm for Impatient People ⌛

gng icon gng

An R/C++ implementation of the Growing Neural Gas algorithm

graphsim icon graphsim

R package: Simulate Expression data from iGraph network using mvtnorm (multivariate normal).

gt icon gt

Easily generate information-rich, publication-quality tables from R

mudata icon mudata

Multimodal Data (.h5mu) implementation for Python

nextflow icon nextflow

A DSL for data-driven computational pipelines

openproblems icon openproblems

Formalizing and benchmarking open problems in single-cell genomics

princurve icon princurve

Fits a Principal Curve in Arbitrary Dimension ⤵

pyscenic icon pyscenic

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

qsub icon qsub

Parallellising lapply() by submitting them to gridengine clusters

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