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amoebaworkshop's Introduction

amoebaworkshop

DOI

Files used for Southampton AMOEBA workshop, Dec 2016

Author: Richard Bradshaw, R.T.Bradshaw [at] soton.ac.uk

For instructions & how to interpret these files, please see the workshop website: https://sites.google.com/site/amoebaworkshop

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amoebaworkshop's Issues

AMOEBA advanced potential energies workshop (2016)

Dear Sir,

In the past, the "AMOEBA advanced potential energies workshop"
was of great practical and theoretical use for learning Tinker.
Since this workshop is no longer available online; I would like to ask
if it is still possible to obtain the said or similar learning resources?

So far; I did find alternative TINKER resources. The AMOEBA advanced
potential energies workshop was nevertheless unique in its explanation
of Tinker its practical use and the AMOEBA force field its theory. So far;
I did manage to find the following workshops and tutorials:

  1. Chembytes: Build molecular structures for TINKER
    http://chembytes.wikidot. com/tnk-tut00
  2. Chembytes: Build a solvent box in TINKER
    http://chembytes.wikidot.com/solventbox
  3. AMOEBA advanced potential energies workshop
    https://sites.google.com/ site/amoebaworkshop/exercise-1
  4. Tinkergpu:Tinker-tut
    https://biomol.bme.utexas.edu/tinkergpu/index.php?title= Tinkergpu:Tinker-tut
  5. CECAM Winter School 2023: Tinker
    https://github.com/louislagardere/winter-school-2023/blob/main/Tinker_Winter_School.pdf

Besides this; I still had a cached version of the workshop its first
exercise. This page printout is visible in the attached PDF.
Exercise 1 - Getting started with Tinker - AMOEBA advanced potential energies workshop.pdf

Kind regards

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