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tianfuzeng nileshpatra ddeka2910 janeyang123

rampler's Issues

Please tag new release compatible with latest bioparser

Hi,
guessing from your last commits you adapted the code to latest bioparser and bumped the version number to 1.1.1. Would you mind tagging this release to make it visible for distributors like Debian?
Thanks a lot, Andreas.

Please provide more information about this program

Hi,
I'm about to package this software for Debian. Unfortunately this repository does not contain some description about this package. Is there any other page I could use to copy some paragraph with a short description or may be some publication I could add to the metadata of the Debian package?
Kind regards, Andreas.

Missing -lz

The build of 2.0.0 breaks:

[3/3] : && /usr/bin/c++ -O2 -pipe -fno-omit-frame-pointer -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fno-omit-frame-pointer  -isystem /usr/local/include -Wall -Wextra -pedantic -O2 -pipe -fno-omit-frame-pointer -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fno-omit-frame-pointer  -isystem /usr/local/include -fstack-protector-strong CMakeFiles/rampler.dir/src/main.cpp.o CMakeFiles/rampler.dir/src/sampler.cpp.o -o bin/rampler   && :
FAILED: bin/rampler 
: && /usr/bin/c++ -O2 -pipe -fno-omit-frame-pointer -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fno-omit-frame-pointer  -isystem /usr/local/include -Wall -Wextra -pedantic -O2 -pipe -fno-omit-frame-pointer -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fno-omit-frame-pointer  -isystem /usr/local/include -fstack-protector-strong CMakeFiles/rampler.dir/src/main.cpp.o CMakeFiles/rampler.dir/src/sampler.cpp.o -o bin/rampler   && :
ld: error: undefined symbol: gzopen
>>> referenced by main.cpp
>>>               CMakeFiles/rampler.dir/src/main.cpp.o:(std::__1::unique_ptr<bioparser::Parser<biosoup::Sequence>, std::__1::default_delete<bioparser::Parser<biosoup::Sequence> > > bioparser::Parser<biosoup::Sequence>::Create<bioparser::FastaParser>(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&))
>>> referenced by main.cpp
>>>               CMakeFiles/rampler.dir/src/main.cpp.o:(std::__1::unique_ptr<bioparser::Parser<biosoup::Sequence>, std::__1::default_delete<bioparser::Parser<biosoup::Sequence> > > bioparser::Parser<biosoup::Sequence>::Create<bioparser::FastqParser>(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&))

ld: error: undefined symbol: gzclose
>>> referenced by main.cpp
>>>               CMakeFiles/rampler.dir/src/main.cpp.o:(bioparser::Parser<biosoup::Sequence>::Parser(gzFile_s*, unsigned int))

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